RNA–Protein interactions for RNA: ENST00000272430.9

RTKN-202, Transcript of rhotekin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTKN, Length 2,142 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTKN-202ENST00000272430 NISCHQ9Y2I1 1504 aa33.23■■■□□ 2.91
RTKN-202ENST00000272430 CCDC180Q9P1Z9 1646 aa28.64■■■□□ 2.17
RTKN-202ENST00000272430 ZCCHC6Q5VYS8 1495 aaKnown RBP28.04■■■□□ 2.08
RTKN-202ENST00000272430 SHROOM4Q9ULL8 1493 aa27.7■■■□□ 2.02
RTKN-202ENST00000272430 DCAF1Q9Y4B6 1507 aa27.36■■□□□ 1.97
RTKN-202ENST00000272430 DCAF8L2P0C7V8 631 aa27.34■■□□□ 1.97
RTKN-202ENST00000272430 SUPT5HO00267 1087 aaKnown RBP26.87■■□□□ 1.89
RTKN-202ENST00000272430 MYO15BQ96JP2 1530 aa26.78■■□□□ 1.88
RTKN-202ENST00000272430 ABCC9O60706 1549 aa26.72■■□□□ 1.87
RTKN-202ENST00000272430 SCRIBQ14160 1630 aa26.58■■□□□ 1.85
RTKN-202ENST00000272430 NACADO15069 1562 aa26.51■■□□□ 1.83
RTKN-202ENST00000272430 RB1CC1Q8TDY2 1594 aa26.16■■□□□ 1.78
RTKN-202ENST00000272430 RSF1Q96T23 1441 aaPredicted RBP26.04■■□□□ 1.76
RTKN-202ENST00000272430 CHIC1Q5VXU3 224 aa25.99■■□□□ 1.75
RTKN-202ENST00000272430 CECR2Q9BXF3 1484 aa25.89■■□□□ 1.74
RTKN-202ENST00000272430 UNC13AQ9UPW8 1703 aa25.88■■□□□ 1.73
RTKN-202ENST00000272430 MROH2BQ7Z745 1585 aa25.78■■□□□ 1.72
RTKN-202ENST00000272430 WIZO95785 1651 aa25.64■■□□□ 1.69
RTKN-202ENST00000272430 BAZ1AQ9NRL2 1556 aaPredicted RBP25.56■■□□□ 1.68
RTKN-202ENST00000272430 BICRAQ9NZM4 1560 aa25.51■■□□□ 1.68
RTKN-202ENST00000272430 SMARCA4P51532 1647 aa25.45■■□□□ 1.66
RTKN-202ENST00000272430 PABPN1Q86U42 306 aaKnown RBP eCLIP25.34■■□□□ 1.656e-7■□□□□ 8.2
RTKN-202ENST00000272430 TOP2AP11388 1531 aaKnown RBP25.26■■□□□ 1.63
RTKN-202ENST00000272430 EIF4G1Q04637 1599 aaKnown RBP25.18■■□□□ 1.62
RTKN-202ENST00000272430 LOC105371045A0A1W2PR82 267 aa25.12■■□□□ 1.61
RTKN-202ENST00000272430 TRIM41Q8WV44 630 aa25.12■■□□□ 1.61
RTKN-202ENST00000272430 SMARCA2P51531 1590 aa25.11■■□□□ 1.61
RTKN-202ENST00000272430 CCDC88BA6NC98 1476 aa25.07■■□□□ 1.6
RTKN-202ENST00000272430 PEG3Q9GZU2 1588 aa25.05■■□□□ 1.6
RTKN-202ENST00000272430 ATAD2BQ9ULI0 1458 aa24.86■■□□□ 1.57
RTKN-202ENST00000272430 ABCC8Q09428 1581 aa24.82■■□□□ 1.56
RTKN-202ENST00000272430 FAM9AQ8IZU1 332 aaPredicted RBP24.81■■□□□ 1.56
RTKN-202ENST00000272430 BAZ1BQ9UIG0 1483 aaKnown RBP24.73■■□□□ 1.55
RTKN-202ENST00000272430 HRCP23327 699 aa24.65■■□□□ 1.54
RTKN-202ENST00000272430 EHMT2Q96KQ7 1210 aa24.54■■□□□ 1.52
RTKN-202ENST00000272430 PCGF6Q9BYE7 350 aa24.53■■□□□ 1.52
RTKN-202ENST00000272430 HMGXB3Q12766 1538 aa24.51■■□□□ 1.51
RTKN-202ENST00000272430 NCAPD3P42695 1498 aa24.49■■□□□ 1.51
RTKN-202ENST00000272430 WRNQ14191 1432 aaPredicted RBP eCLIP24.45■■□□□ 1.5
RTKN-202ENST00000272430 SOGA1O94964 1423 aa24.44■■□□□ 1.5
RTKN-202ENST00000272430 SYNJ1O43426 1573 aa24.43■■□□□ 1.5
RTKN-202ENST00000272430 RUSC2Q8N2Y8 1516 aa24.37■■□□□ 1.49
RTKN-202ENST00000272430 EEA1Q15075 1411 aa24.28■■□□□ 1.48
RTKN-202ENST00000272430 TRIM26Q12899 539 aaPredicted RBP24.26■■□□□ 1.47
RTKN-202ENST00000272430 TOP2BQ02880 1626 aa24.2■■□□□ 1.46
RTKN-202ENST00000272430 CSRNP3Q8WYN3 585 aa24.19■■□□□ 1.46
RTKN-202ENST00000272430 BIVM-ERCC5R4GMW8 1640 aa24.17■■□□□ 1.46
RTKN-202ENST00000272430 CC2D2AQ9P2K1 1620 aa24.16■■□□□ 1.46
RTKN-202ENST00000272430 CFTRP13569 1480 aa24.14■■□□□ 1.45
RTKN-202ENST00000272430 TNIKQ9UKE5 1360 aa24.1■■□□□ 1.45
RTKN-202ENST00000272430 PRDM2Q13029 1718 aa24.09■■□□□ 1.45
RTKN-202ENST00000272430 PELP1Q8IZL8 1130 aaKnown RBP24.09■■□□□ 1.45
RTKN-202ENST00000272430 CEP162Q5TB80 1403 aa24.09■■□□□ 1.45
RTKN-202ENST00000272430 GOLGA3Q08378 1498 aa24.07■■□□□ 1.44
RTKN-202ENST00000272430 KIF21BO75037 1637 aa24.06■■□□□ 1.44
RTKN-202ENST00000272430 CUX1P39880 1505 aa24.05■■□□□ 1.44
RTKN-202ENST00000272430 CEP164Q9UPV0 1460 aa24■■□□□ 1.43
RTKN-202ENST00000272430 UBTFP17480 764 aaKnown RBP23.96■■□□□ 1.43
RTKN-202ENST00000272430 PPARGC1BQ86YN6 1023 aaKnown RBP23.94■■□□□ 1.42
RTKN-202ENST00000272430 CADPSQ9ULU8 1353 aa23.92■■□□□ 1.42
RTKN-202ENST00000272430 RAPGEF2Q9Y4G8 1499 aa23.89■■□□□ 1.42
RTKN-202ENST00000272430 PRXQ9BXM0 1461 aa23.77■■□□□ 1.4
RTKN-202ENST00000272430 ERICH3Q5RHP9 1530 aa23.75■■□□□ 1.39
RTKN-202ENST00000272430 CLIP1P30622 1438 aa23.74■■□□□ 1.39
RTKN-202ENST00000272430 KIF27Q86VH2 1401 aa23.73■■□□□ 1.39
RTKN-202ENST00000272430 FANCD2Q9BXW9 1451 aa23.7■■□□□ 1.38
RTKN-202ENST00000272430 NESP48681 1621 aa23.68■■□□□ 1.38
RTKN-202ENST00000272430 FGD5Q6ZNL6 1462 aa23.67■■□□□ 1.38
RTKN-202ENST00000272430 TTBK1Q5TCY1 1321 aaPredicted RBP23.63■■□□□ 1.37
RTKN-202ENST00000272430 CUX2O14529 1486 aa23.61■■□□□ 1.37
RTKN-202ENST00000272430 VPS8Q8N3P4 1428 aa23.6■■□□□ 1.37
RTKN-202ENST00000272430 DNMBPQ6XZF7 1577 aa23.57■■□□□ 1.36
RTKN-202ENST00000272430 DNAJC5BQ9UF47 199 aa23.56■■□□□ 1.36
RTKN-202ENST00000272430 LAMC3Q9Y6N6 1575 aa23.56■■□□□ 1.36
RTKN-202ENST00000272430 RANGAP1P46060 587 aaPredicted RBP23.54■■□□□ 1.36
RTKN-202ENST00000272430 TOPBP1Q92547 1522 aa23.53■■□□□ 1.36
RTKN-202ENST00000272430 IGF1RP08069 1367 aa23.52■■□□□ 1.36
RTKN-202ENST00000272430 ARAP1Q96P48 1450 aa23.49■■□□□ 1.35
RTKN-202ENST00000272430 POLA1P09884 1462 aaPredicted RBP23.47■■□□□ 1.35
RTKN-202ENST00000272430 ZEB1P37275 1124 aaPredicted RBP23.47■■□□□ 1.35
RTKN-202ENST00000272430 RAD54L2Q9Y4B4 1467 aa23.45■■□□□ 1.35
RTKN-202ENST00000272430 URB2Q14146 1524 aaKnown RBP23.43■■□□□ 1.34
RTKN-202ENST00000272430 ABCA10Q8WWZ4 1543 aa23.42■■□□□ 1.34
RTKN-202ENST00000272430 KIF21AQ7Z4S6 1674 aa23.39■■□□□ 1.33
RTKN-202ENST00000272430 CARMIL1Q5VZK9 1371 aa23.38■■□□□ 1.33
RTKN-202ENST00000272430 ARHGAP35Q9NRY4 1499 aa23.37■■□□□ 1.33
RTKN-202ENST00000272430 WDR97A6NE52 1622 aa23.37■■□□□ 1.33
RTKN-202ENST00000272430 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.36■■□□□ 1.33
RTKN-202ENST00000272430 PDS5BQ9NTI5 1447 aa23.32■■□□□ 1.32
RTKN-202ENST00000272430 MYT1Q01538 1121 aa23.28■■□□□ 1.32
RTKN-202ENST00000272430 APLP2Q06481 763 aa23.28■■□□□ 1.32
RTKN-202ENST00000272430 CUL7Q14999 1698 aa23.24■■□□□ 1.31
RTKN-202ENST00000272430 ABCA5Q8WWZ7 1642 aa23.23■■□□□ 1.31
RTKN-202ENST00000272430 CCER1Q8TC90 406 aaPredicted RBP23.23■■□□□ 1.31
RTKN-202ENST00000272430 SCAF1Q9H7N4 1312 aaKnown RBP23.2■■□□□ 1.3
RTKN-202ENST00000272430 KANK4Q5T7N3 995 aaPredicted RBP23.18■■□□□ 1.3
RTKN-202ENST00000272430 TARBP1Q13395 1621 aaKnown RBP23.16■■□□□ 1.3
RTKN-202ENST00000272430 CTTNBP2Q8WZ74 1663 aa23.15■■□□□ 1.3
RTKN-202ENST00000272430 TDRD9Q8NDG6 1382 aaKnown RBP23.14■■□□□ 1.3
RTKN-202ENST00000272430 HNRNPUL2Q1KMD3 747 aaKnown RBP23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms