RNA–Protein interactions for RNA: ENST00000482014.1

CHRD-213, Transcript of chordin, humanhuman

TSL 4

Gene CHRD, Length 560 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-213ENST00000482014 NISCHQ9Y2I1 1504 aa40.33■■■■■ 4.05
CHRD-213ENST00000482014 ABCC9O60706 1549 aa37.46■■■■□ 3.59
CHRD-213ENST00000482014 CCDC180Q9P1Z9 1646 aa36.57■■■■□ 3.44
CHRD-213ENST00000482014 DNAJC5BQ9UF47 199 aa35.96■■■■□ 3.35
CHRD-213ENST00000482014 RB1CC1Q8TDY2 1594 aa35.31■■■■□ 3.24
CHRD-213ENST00000482014 NACADO15069 1562 aa34.87■■■■□ 3.17
CHRD-213ENST00000482014 PABPN1Q86U42 306 aaKnown RBP eCLIP34.75■■■■□ 3.153e-7■■■■□ 21.7
CHRD-213ENST00000482014 DCAF8L2P0C7V8 631 aa34.47■■■■□ 3.11
CHRD-213ENST00000482014 UNC13AQ9UPW8 1703 aa34.32■■■■□ 3.08
CHRD-213ENST00000482014 BICRAQ9NZM4 1560 aa34.23■■■■□ 3.07
CHRD-213ENST00000482014 MYO15BQ96JP2 1530 aa34.12■■■■□ 3.05
CHRD-213ENST00000482014 CECR2Q9BXF3 1484 aa33.9■■■■□ 3.02
CHRD-213ENST00000482014 SHROOM4Q9ULL8 1493 aa33.85■■■■□ 3.01
CHRD-213ENST00000482014 DNAJC5Q9H3Z4 198 aa33.81■■■■□ 3
CHRD-213ENST00000482014 CC2D2AQ9P2K1 1620 aa33.79■■■■□ 3
CHRD-213ENST00000482014 EIF4G1Q04637 1599 aaKnown RBP33.51■■■□□ 2.96
CHRD-213ENST00000482014 DCAF1Q9Y4B6 1507 aa33.32■■■□□ 2.92
CHRD-213ENST00000482014 ZCCHC6Q5VYS8 1495 aaKnown RBP33.23■■■□□ 2.91
CHRD-213ENST00000482014 SCRIBQ14160 1630 aa33.2■■■□□ 2.91
CHRD-213ENST00000482014 CUX2O14529 1486 aa32.77■■■□□ 2.84
CHRD-213ENST00000482014 ERCC6Q03468 1493 aa32.48■■■□□ 2.79
CHRD-213ENST00000482014 NCAPD3P42695 1498 aa32.22■■■□□ 2.75
CHRD-213ENST00000482014 ATAD2BQ9ULI0 1458 aa31.94■■■□□ 2.7
CHRD-213ENST00000482014 TRIM41Q8WV44 630 aa31.89■■■□□ 2.7
CHRD-213ENST00000482014 NESP48681 1621 aa31.89■■■□□ 2.7
CHRD-213ENST00000482014 HMGXB3Q12766 1538 aa31.85■■■□□ 2.69
CHRD-213ENST00000482014 SMARCA2P51531 1590 aa31.83■■■□□ 2.69
CHRD-213ENST00000482014 THOC2Q8NI27 1593 aaKnown RBP31.75■■■□□ 2.67
CHRD-213ENST00000482014 SMARCA4P51532 1647 aa31.62■■■□□ 2.65
CHRD-213ENST00000482014 LAMC3Q9Y6N6 1575 aa31.6■■■□□ 2.65
CHRD-213ENST00000482014 BAZ1BQ9UIG0 1483 aaKnown RBP31.59■■■□□ 2.65
CHRD-213ENST00000482014 PDS5BQ9NTI5 1447 aa31.52■■■□□ 2.64
CHRD-213ENST00000482014 BAZ1AQ9NRL2 1556 aaPredicted RBP31.39■■■□□ 2.62
CHRD-213ENST00000482014 KIF21AQ7Z4S6 1674 aa31.39■■■□□ 2.62
CHRD-213ENST00000482014 PEG3Q9GZU2 1588 aa31.37■■■□□ 2.61
CHRD-213ENST00000482014 MRC2Q9UBG0 1479 aa31.24■■■□□ 2.59
CHRD-213ENST00000482014 CADPSQ9ULU8 1353 aa31.19■■■□□ 2.58
CHRD-213ENST00000482014 WDR62O43379 1518 aa31.17■■■□□ 2.58
CHRD-213ENST00000482014 OSCARQ8IYS5 282 aa31.15■■■□□ 2.58
CHRD-213ENST00000482014 MROH2BQ7Z745 1585 aa31.02■■■□□ 2.56
CHRD-213ENST00000482014 CEP164Q9UPV0 1460 aa30.94■■■□□ 2.54
CHRD-213ENST00000482014 FANCD2Q9BXW9 1451 aa30.81■■■□□ 2.52
CHRD-213ENST00000482014 RIMBP3CA6NJZ7 1639 aa30.7■■■□□ 2.51
CHRD-213ENST00000482014 RIMBP3BA6NNM3 1639 aa30.7■■■□□ 2.51
CHRD-213ENST00000482014 RIMBP3Q9UFD9 1639 aa30.7■■■□□ 2.51
CHRD-213ENST00000482014 CFTRP13569 1480 aa30.63■■■□□ 2.49
CHRD-213ENST00000482014 URB2Q14146 1524 aaKnown RBP30.57■■■□□ 2.48
CHRD-213ENST00000482014 ARHGEF11O15085 1522 aa30.56■■■□□ 2.48
CHRD-213ENST00000482014 WIZO95785 1651 aa30.55■■■□□ 2.48
CHRD-213ENST00000482014 CYB5RLQ6IPT4 315 aa30.44■■■□□ 2.46
CHRD-213ENST00000482014 TRHP20396 242 aaPredicted RBP30.42■■■□□ 2.46
CHRD-213ENST00000482014 IFT140Q96RY7 1462 aa30.38■■■□□ 2.45
CHRD-213ENST00000482014 ZNF608Q9ULD9 1512 aaPredicted RBP30.32■■■□□ 2.44
CHRD-213ENST00000482014 AEBP2Q6ZN18 517 aaPredicted RBP30.27■■■□□ 2.44
CHRD-213ENST00000482014 TOP2AP11388 1531 aaKnown RBP30.19■■■□□ 2.42
CHRD-213ENST00000482014 ARAP1Q96P48 1450 aa30.19■■■□□ 2.42
CHRD-213ENST00000482014 RSF1Q96T23 1441 aaPredicted RBP30.13■■■□□ 2.41
CHRD-213ENST00000482014 PRDM2Q13029 1718 aa30.1■■■□□ 2.41
CHRD-213ENST00000482014 TOPBP1Q92547 1522 aa30.1■■■□□ 2.41
CHRD-213ENST00000482014 EIF4G3O43432 1585 aaKnown RBP30.1■■■□□ 2.41
CHRD-213ENST00000482014 ABCC8Q09428 1581 aa30.07■■■□□ 2.4
CHRD-213ENST00000482014 FBLN2P98095 1184 aa30.01■■■□□ 2.39
CHRD-213ENST00000482014 CHD1O14646 1710 aa29.99■■■□□ 2.39
CHRD-213ENST00000482014 AQRO60306 1485 aaKnown RBP eCLIP29.96■■■□□ 2.393e-7■■□□□ 11.6
CHRD-213ENST00000482014 DNMBPQ6XZF7 1577 aa29.9■■■□□ 2.38
CHRD-213ENST00000482014 TARBP1Q13395 1621 aaKnown RBP29.85■■■□□ 2.37
CHRD-213ENST00000482014 CCDC88BA6NC98 1476 aa29.85■■■□□ 2.37
CHRD-213ENST00000482014 POLA1P09884 1462 aaPredicted RBP29.73■■■□□ 2.35
CHRD-213ENST00000482014 CLASP1Q7Z460 1538 aa29.71■■■□□ 2.35
CHRD-213ENST00000482014 CHMP7Q8WUX9 453 aaPredicted RBP29.67■■■□□ 2.34
CHRD-213ENST00000482014 SYNJ1O43426 1573 aa29.66■■■□□ 2.34
CHRD-213ENST00000482014 TDRD9Q8NDG6 1382 aaKnown RBP29.65■■■□□ 2.34
CHRD-213ENST00000482014 SNAPC4Q5SXM2 1469 aa29.64■■■□□ 2.34
CHRD-213ENST00000482014 SOGA1O94964 1423 aa29.62■■■□□ 2.33
CHRD-213ENST00000482014 RAD54L2Q9Y4B4 1467 aa29.61■■■□□ 2.33
CHRD-213ENST00000482014 WDR97A6NE52 1622 aa29.6■■■□□ 2.33
CHRD-213ENST00000482014 MAGI1Q96QZ7 1491 aaPredicted RBP29.58■■■□□ 2.33
CHRD-213ENST00000482014 GAPVD1Q14C86 1478 aa29.51■■■□□ 2.31
CHRD-213ENST00000482014 SYNJ2O15056 1496 aa29.48■■■□□ 2.31
CHRD-213ENST00000482014 GRIN2BQ13224 1484 aa29.48■■■□□ 2.31
CHRD-213ENST00000482014 FGD5Q6ZNL6 1462 aa29.4■■■□□ 2.3
CHRD-213ENST00000482014 CUX1P39880 1505 aa29.2■■■□□ 2.27
CHRD-213ENST00000482014 PBRM1Q86U86 1689 aa29.16■■■□□ 2.26
CHRD-213ENST00000482014 ERCC6L2Q5T890 1561 aa29.11■■■□□ 2.25
CHRD-213ENST00000482014 GRIN2AQ12879 1464 aa29.07■■■□□ 2.24
CHRD-213ENST00000482014 CEP170Q5SW79 1584 aa29.05■■■□□ 2.24
CHRD-213ENST00000482014 ABCA10Q8WWZ4 1543 aa29.05■■■□□ 2.24
CHRD-213ENST00000482014 NUP160Q12769 1436 aa29.03■■■□□ 2.24
CHRD-213ENST00000482014 ABCA5Q8WWZ7 1642 aa29.02■■■□□ 2.24
CHRD-213ENST00000482014 KIF13AQ9H1H9 1805 aa29■■■□□ 2.23
CHRD-213ENST00000482014 ILDR1Q86SU0 546 aaPredicted RBP28.97■■■□□ 2.23
CHRD-213ENST00000482014 SHROOM2Q13796 1616 aa28.94■■■□□ 2.22
CHRD-213ENST00000482014 FAM69CQ0P6D2 419 aa28.91■■■□□ 2.22
CHRD-213ENST00000482014 ADAMTS12P58397 1594 aa28.88■■■□□ 2.21
CHRD-213ENST00000482014 KDM4FA0A1W2PPD8 638 aa28.88■■■□□ 2.21
CHRD-213ENST00000482014 ABCC10Q5T3U5 1492 aa28.88■■■□□ 2.21
CHRD-213ENST00000482014 FHAD1B1AJZ9 1412 aa28.86■■■□□ 2.21
CHRD-213ENST00000482014 NPM1P06748 294 aaKnown RBP eCLIP28.84■■■□□ 2.21
CHRD-213ENST00000482014 PRG4Q92954 1404 aaPredicted RBP28.82■■■□□ 2.2
CHRD-213ENST00000482014 WRNQ14191 1432 aaPredicted RBP eCLIP28.79■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 140.9 ms