RNA–Protein interactions for RNA: ENST00000332127.8

ZC3H11A-201, Transcript of zinc finger CCCH-type containing 11A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZC3H11A, Length 5,015 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H11A-201ENST00000332127 NISCHQ9Y2I1 1504 aa11.9□□□□□ -0.5
ZC3H11A-201ENST00000332127 SUPT5HO00267 1087 aaKnown RBP10.94□□□□□ -0.66
ZC3H11A-201ENST00000332127 SHROOM4Q9ULL8 1493 aa10.86□□□□□ -0.67
ZC3H11A-201ENST00000332127 DCAF8L2P0C7V8 631 aa10.8□□□□□ -0.68
ZC3H11A-201ENST00000332127 PCGF6Q9BYE7 350 aa10.61□□□□□ -0.71
ZC3H11A-201ENST00000332127 HRCP23327 699 aa10.56□□□□□ -0.72
ZC3H11A-201ENST00000332127 PELP1Q8IZL8 1130 aaKnown RBP10.53□□□□□ -0.72
ZC3H11A-201ENST00000332127 ZEB1P37275 1124 aaPredicted RBP10.47□□□□□ -0.73
ZC3H11A-201ENST00000332127 CHIC1Q5VXU3 224 aa10.32□□□□□ -0.76
ZC3H11A-201ENST00000332127 TRIM26Q12899 539 aaPredicted RBP10.31□□□□□ -0.76
ZC3H11A-201ENST00000332127 MYT1Q01538 1121 aa10.28□□□□□ -0.76
ZC3H11A-201ENST00000332127 CENPBP07199 599 aaPredicted RBP10.25□□□□□ -0.77
ZC3H11A-201ENST00000332127 PPARGC1BQ86YN6 1023 aaKnown RBP10.24□□□□□ -0.77
ZC3H11A-201ENST00000332127 EHMT2Q96KQ7 1210 aa10.23□□□□□ -0.77
ZC3H11A-201ENST00000332127 TRIM41Q8WV44 630 aa10.18□□□□□ -0.78
ZC3H11A-201ENST00000332127 FAM9AQ8IZU1 332 aaPredicted RBP10.18□□□□□ -0.78
ZC3H11A-201ENST00000332127 CCER1Q8TC90 406 aaPredicted RBP10.13□□□□□ -0.79
ZC3H11A-201ENST00000332127 LOC105371045A0A1W2PR82 267 aa10.13□□□□□ -0.79
ZC3H11A-201ENST00000332127 DCAF1Q9Y4B6 1507 aa10.08□□□□□ -0.8
ZC3H11A-201ENST00000332127 ZCCHC6Q5VYS8 1495 aaKnown RBP10.03□□□□□ -0.8
ZC3H11A-201ENST00000332127 APLP2Q06481 763 aa9.99□□□□□ -0.81
ZC3H11A-201ENST00000332127 MYO15BQ96JP2 1530 aa9.98□□□□□ -0.81
ZC3H11A-201ENST00000332127 TTBK1Q5TCY1 1321 aaPredicted RBP9.97□□□□□ -0.81
ZC3H11A-201ENST00000332127 CCDC180Q9P1Z9 1646 aa9.92□□□□□ -0.82
ZC3H11A-201ENST00000332127 YTHDC1Q96MU7 727 aaKnown RBP9.91□□□□□ -0.82
ZC3H11A-201ENST00000332127 DIEXFQ68CQ4 756 aaKnown RBP9.88□□□□□ -0.83
ZC3H11A-201ENST00000332127 ACIN1Q9UKV3 1341 aaKnown RBP9.84□□□□□ -0.83
ZC3H11A-201ENST00000332127 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.84□□□□□ -0.83
ZC3H11A-201ENST00000332127 UBTFP17480 764 aaKnown RBP9.83□□□□□ -0.84
ZC3H11A-201ENST00000332127 GTF3C3Q9Y5Q9 886 aa9.82□□□□□ -0.84
ZC3H11A-201ENST00000332127 SCAF1Q9H7N4 1312 aaKnown RBP9.79□□□□□ -0.84
ZC3H11A-201ENST00000332127 ERICH6Q7L0X2 663 aa9.72□□□□□ -0.85
ZC3H11A-201ENST00000332127 NEFLP07196 543 aa9.71□□□□□ -0.86
ZC3H11A-201ENST00000332127 ZNF316A6NFI3 1004 aaPredicted RBP9.7□□□□□ -0.86
ZC3H11A-201ENST00000332127 RANGAP1P46060 587 aaPredicted RBP9.67□□□□□ -0.86
ZC3H11A-201ENST00000332127 NEUROD1Q13562 356 aa9.66□□□□□ -0.86
ZC3H11A-201ENST00000332127 HNRNPUL2Q1KMD3 747 aaKnown RBP9.65□□□□□ -0.86
ZC3H11A-201ENST00000332127 SCRIBQ14160 1630 aa9.61□□□□□ -0.87
ZC3H11A-201ENST00000332127 CLSPNQ9HAW4 1339 aa9.59□□□□□ -0.87
ZC3H11A-201ENST00000332127 RSF1Q96T23 1441 aaPredicted RBP9.54□□□□□ -0.88
ZC3H11A-201ENST00000332127 ABCC9O60706 1549 aa9.52□□□□□ -0.89
ZC3H11A-201ENST00000332127 RB1CC1Q8TDY2 1594 aa9.52□□□□□ -0.89
ZC3H11A-201ENST00000332127 CSRNP3Q8WYN3 585 aa9.47□□□□□ -0.89
ZC3H11A-201ENST00000332127 ITGAEP38570 1179 aa9.45□□□□□ -0.9
ZC3H11A-201ENST00000332127 ATP1B4Q9UN42 357 aaPredicted RBP9.45□□□□□ -0.9
ZC3H11A-201ENST00000332127 MIER1Q8N108 512 aa9.43□□□□□ -0.9
ZC3H11A-201ENST00000332127 CEP162Q5TB80 1403 aa9.41□□□□□ -0.9
ZC3H11A-201ENST00000332127 BCANQ96GW7 911 aa9.4□□□□□ -0.9
ZC3H11A-201ENST00000332127 EEA1Q15075 1411 aa9.39□□□□□ -0.91
ZC3H11A-201ENST00000332127 TNIKQ9UKE5 1360 aa9.36□□□□□ -0.91
ZC3H11A-201ENST00000332127 GOLGA3Q08378 1498 aa9.36□□□□□ -0.91
ZC3H11A-201ENST00000332127 ANP32CO43423 234 aa9.35□□□□□ -0.91
ZC3H11A-201ENST00000332127 CDK11AQ9UQ88 783 aaPredicted RBP9.33□□□□□ -0.92
ZC3H11A-201ENST00000332127 FKBP8Q14318 412 aa9.3□□□□□ -0.92
ZC3H11A-201ENST00000332127 CLIP1P30622 1438 aa9.3□□□□□ -0.92
ZC3H11A-201ENST00000332127 NACADO15069 1562 aa9.3□□□□□ -0.92
ZC3H11A-201ENST00000332127 FAM50AQ14320 339 aaKnown RBP9.3□□□□□ -0.92
ZC3H11A-201ENST00000332127 ANP32EQ9BTT0 268 aa9.29□□□□□ -0.92
ZC3H11A-201ENST00000332127 RTL5Q5HYW3 569 aaPredicted RBP9.27□□□□□ -0.92
ZC3H11A-201ENST00000332127 CEP164Q9UPV0 1460 aa9.26□□□□□ -0.93
ZC3H11A-201ENST00000332127 SUPT16HQ9Y5B9 1047 aaKnown RBP9.25□□□□□ -0.93
ZC3H11A-201ENST00000332127 WRNQ14191 1432 aaPredicted RBP eCLIP9.25□□□□□ -0.93
ZC3H11A-201ENST00000332127 BAZ1AQ9NRL2 1556 aaPredicted RBP9.25□□□□□ -0.93
ZC3H11A-201ENST00000332127 MYT1LQ9UL68 1186 aa9.24□□□□□ -0.93
ZC3H11A-201ENST00000332127 CECR2Q9BXF3 1484 aa9.24□□□□□ -0.93
ZC3H11A-201ENST00000332127 MROH2BQ7Z745 1585 aa9.22□□□□□ -0.93
ZC3H11A-201ENST00000332127 DAXXQ9UER7 740 aaPredicted RBP9.2□□□□□ -0.94
ZC3H11A-201ENST00000332127 DDX10Q13206 875 aaKnown RBP9.2□□□□□ -0.94
ZC3H11A-201ENST00000332127 PABPN1Q86U42 306 aaKnown RBP eCLIP9.2□□□□□ -0.941e-7■■□□□ 12.5
ZC3H11A-201ENST00000332127 SOGA1O94964 1423 aa9.19□□□□□ -0.94
ZC3H11A-201ENST00000332127 WIZO95785 1651 aa9.18□□□□□ -0.94
ZC3H11A-201ENST00000332127 ABCC8Q09428 1581 aa9.18□□□□□ -0.94
ZC3H11A-201ENST00000332127 CCDC88BA6NC98 1476 aa9.16□□□□□ -0.94
ZC3H11A-201ENST00000332127 VPS8Q8N3P4 1428 aa9.15□□□□□ -0.94
ZC3H11A-201ENST00000332127 TONSLQ96HA7 1378 aa9.15□□□□□ -0.94
ZC3H11A-201ENST00000332127 POLR3GLQ9BT43 218 aa9.15□□□□□ -0.94
ZC3H11A-201ENST00000332127 TOP2AP11388 1531 aaKnown RBP9.14□□□□□ -0.95
ZC3H11A-201ENST00000332127 ANP32AP39687 249 aaKnown RBP9.13□□□□□ -0.95
ZC3H11A-201ENST00000332127 TRIM52Q96A61 297 aa9.13□□□□□ -0.95
ZC3H11A-201ENST00000332127 HNRNPUQ00839 825 aaKnown RBP eCLIP9.13□□□□□ -0.95
ZC3H11A-201ENST00000332127 TSHZ2Q9NRE2 1034 aa9.1□□□□□ -0.95
ZC3H11A-201ENST00000332127 BCL11AQ9H165 835 aa9.1□□□□□ -0.95
ZC3H11A-201ENST00000332127 CNGB1Q14028 1251 aaPredicted RBP9.08□□□□□ -0.96
ZC3H11A-201ENST00000332127 BAZ1BQ9UIG0 1483 aaKnown RBP9.06□□□□□ -0.96
ZC3H11A-201ENST00000332127 CCNB3Q8WWL7 1395 aa9.05□□□□□ -0.96
ZC3H11A-201ENST00000332127 CCER2I3L3R5 266 aa9.05□□□□□ -0.96
ZC3H11A-201ENST00000332127 P3H3Q8IVL6 736 aa9.04□□□□□ -0.96
ZC3H11A-201ENST00000332127 RBM19Q9Y4C8 960 aaKnown RBP9.04□□□□□ -0.96
ZC3H11A-201ENST00000332127 TIMELESSQ9UNS1 1208 aa9.03□□□□□ -0.96
ZC3H11A-201ENST00000332127 KIF27Q86VH2 1401 aa9.02□□□□□ -0.97
ZC3H11A-201ENST00000332127 DHX57Q6P158 1386 aaKnown RBP9.02□□□□□ -0.97
ZC3H11A-201ENST00000332127 IRX6P78412 446 aaPredicted RBP9.02□□□□□ -0.97
ZC3H11A-201ENST00000332127 FAM9BQ8IZU0 186 aa9.02□□□□□ -0.97
ZC3H11A-201ENST00000332127 SMARCA4P51532 1647 aa9.01□□□□□ -0.97
ZC3H11A-201ENST00000332127 HIRIP3Q9BW71 556 aaPredicted RBP9□□□□□ -0.97
ZC3H11A-201ENST00000332127 ZBTB47Q9UFB7 747 aaPredicted RBP9□□□□□ -0.97
ZC3H11A-201ENST00000332127 NBR1Q14596 966 aa9□□□□□ -0.97
ZC3H11A-201ENST00000332127 SETD5Q9C0A6 1442 aa8.99□□□□□ -0.97
ZC3H11A-201ENST00000332127 PPP4R2Q9NY27 417 aa8.99□□□□□ -0.97
ZC3H11A-201ENST00000332127 SMARCA2P51531 1590 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms