RNA–Protein interactions for RNA: ENST00000590153.1

SSH2-211, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 4 BASIC

Gene SSH2, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-211ENST00000590153 NISCHQ9Y2I1 1504 aa40.05■■■■■ 4
SSH2-211ENST00000590153 CCDC180Q9P1Z9 1646 aa35.52■■■■□ 3.28
SSH2-211ENST00000590153 ABCC9O60706 1549 aa34.99■■■■□ 3.19
SSH2-211ENST00000590153 RB1CC1Q8TDY2 1594 aa33.43■■■□□ 2.94
SSH2-211ENST00000590153 NACADO15069 1562 aa33.41■■■□□ 2.94
SSH2-211ENST00000590153 ZCCHC6Q5VYS8 1495 aaKnown RBP33.35■■■□□ 2.93
SSH2-211ENST00000590153 DCAF8L2P0C7V8 631 aa33.34■■■□□ 2.93
SSH2-211ENST00000590153 MYO15BQ96JP2 1530 aa33.3■■■□□ 2.92
SSH2-211ENST00000590153 DCAF1Q9Y4B6 1507 aa33.18■■■□□ 2.9
SSH2-211ENST00000590153 UNC13AQ9UPW8 1703 aa33■■■□□ 2.87
SSH2-211ENST00000590153 BICRAQ9NZM4 1560 aa32.65■■■□□ 2.82
SSH2-211ENST00000590153 DNAJC5BQ9UF47 199 aa32.59■■■□□ 2.81
SSH2-211ENST00000590153 PABPN1Q86U42 306 aaKnown RBP eCLIP32.55■■■□□ 2.8
SSH2-211ENST00000590153 SCRIBQ14160 1630 aa32.35■■■□□ 2.77
SSH2-211ENST00000590153 SHROOM4Q9ULL8 1493 aa32.07■■■□□ 2.72
SSH2-211ENST00000590153 CC2D2AQ9P2K1 1620 aa31.71■■■□□ 2.67
SSH2-211ENST00000590153 EIF4G1Q04637 1599 aaKnown RBP31.71■■■□□ 2.67
SSH2-211ENST00000590153 CECR2Q9BXF3 1484 aa31.45■■■□□ 2.62
SSH2-211ENST00000590153 SMARCA4P51532 1647 aa31.02■■■□□ 2.56
SSH2-211ENST00000590153 BAZ1AQ9NRL2 1556 aaPredicted RBP30.98■■■□□ 2.55
SSH2-211ENST00000590153 NCAPD3P42695 1498 aa30.89■■■□□ 2.54
SSH2-211ENST00000590153 ATAD2BQ9ULI0 1458 aa30.89■■■□□ 2.53
SSH2-211ENST00000590153 MROH2BQ7Z745 1585 aa30.87■■■□□ 2.53
SSH2-211ENST00000590153 SMARCA2P51531 1590 aa30.78■■■□□ 2.52
SSH2-211ENST00000590153 PEG3Q9GZU2 1588 aa30.78■■■□□ 2.52
SSH2-211ENST00000590153 HMGXB3Q12766 1538 aa30.66■■■□□ 2.5
SSH2-211ENST00000590153 RSF1Q96T23 1441 aaPredicted RBP30.56■■■□□ 2.48
SSH2-211ENST00000590153 BAZ1BQ9UIG0 1483 aaKnown RBP30.54■■■□□ 2.48
SSH2-211ENST00000590153 WIZO95785 1651 aa30.51■■■□□ 2.47
SSH2-211ENST00000590153 NESP48681 1621 aa30.24■■■□□ 2.43
SSH2-211ENST00000590153 TOP2AP11388 1531 aaKnown RBP30.16■■■□□ 2.42
SSH2-211ENST00000590153 ERCC6Q03468 1493 aa30.06■■■□□ 2.4
SSH2-211ENST00000590153 LAMC3Q9Y6N6 1575 aa30.01■■■□□ 2.39
SSH2-211ENST00000590153 CADPSQ9ULU8 1353 aa29.97■■■□□ 2.39
SSH2-211ENST00000590153 CUX2O14529 1486 aa29.97■■■□□ 2.39
SSH2-211ENST00000590153 KIF21AQ7Z4S6 1674 aa29.95■■■□□ 2.39
SSH2-211ENST00000590153 THOC2Q8NI27 1593 aaKnown RBP29.94■■■□□ 2.38
SSH2-211ENST00000590153 CCDC88BA6NC98 1476 aa29.87■■■□□ 2.37
SSH2-211ENST00000590153 CFTRP13569 1480 aa29.8■■■□□ 2.36
SSH2-211ENST00000590153 PDS5BQ9NTI5 1447 aa29.78■■■□□ 2.36
SSH2-211ENST00000590153 SUPT5HO00267 1087 aaKnown RBP29.73■■■□□ 2.35
SSH2-211ENST00000590153 FANCD2Q9BXW9 1451 aa29.56■■■□□ 2.32
SSH2-211ENST00000590153 DNAJC5Q9H3Z4 198 aa29.52■■■□□ 2.32
SSH2-211ENST00000590153 WDR62O43379 1518 aa29.51■■■□□ 2.32
SSH2-211ENST00000590153 MRC2Q9UBG0 1479 aa29.51■■■□□ 2.31
SSH2-211ENST00000590153 PRDM2Q13029 1718 aa29.51■■■□□ 2.31
SSH2-211ENST00000590153 CEP164Q9UPV0 1460 aa29.48■■■□□ 2.31
SSH2-211ENST00000590153 URB2Q14146 1524 aaKnown RBP29.3■■■□□ 2.28
SSH2-211ENST00000590153 TOPBP1Q92547 1522 aa29.12■■■□□ 2.25
SSH2-211ENST00000590153 ABCC8Q09428 1581 aa29.12■■■□□ 2.25
SSH2-211ENST00000590153 DNMBPQ6XZF7 1577 aa29.06■■■□□ 2.24
SSH2-211ENST00000590153 CUX1P39880 1505 aa28.94■■■□□ 2.22
SSH2-211ENST00000590153 IFT140Q96RY7 1462 aa28.91■■■□□ 2.22
SSH2-211ENST00000590153 POLA1P09884 1462 aaPredicted RBP28.87■■■□□ 2.21
SSH2-211ENST00000590153 ZNF608Q9ULD9 1512 aaPredicted RBP28.87■■■□□ 2.21
SSH2-211ENST00000590153 TARBP1Q13395 1621 aaKnown RBP28.83■■■□□ 2.21
SSH2-211ENST00000590153 FGD5Q6ZNL6 1462 aa28.78■■■□□ 2.2
SSH2-211ENST00000590153 SOGA1O94964 1423 aa28.77■■■□□ 2.2
SSH2-211ENST00000590153 EIF4G3O43432 1585 aaKnown RBP28.76■■■□□ 2.19
SSH2-211ENST00000590153 RAD54L2Q9Y4B4 1467 aa28.76■■■□□ 2.19
SSH2-211ENST00000590153 WRNQ14191 1432 aaPredicted RBP eCLIP28.73■■■□□ 2.19
SSH2-211ENST00000590153 TOP2BQ02880 1626 aa28.69■■■□□ 2.18
SSH2-211ENST00000590153 BIVM-ERCC5R4GMW8 1640 aa28.69■■■□□ 2.18
SSH2-211ENST00000590153 SYNJ1O43426 1573 aa28.67■■■□□ 2.18
SSH2-211ENST00000590153 AQRO60306 1485 aaKnown RBP eCLIP28.65■■■□□ 2.18
SSH2-211ENST00000590153 TDRD9Q8NDG6 1382 aaKnown RBP28.6■■■□□ 2.17
SSH2-211ENST00000590153 WDR97A6NE52 1622 aa28.56■■■□□ 2.16
SSH2-211ENST00000590153 ABCA10Q8WWZ4 1543 aa28.55■■■□□ 2.16
SSH2-211ENST00000590153 CHD1O14646 1710 aa28.55■■■□□ 2.16
SSH2-211ENST00000590153 OSCARQ8IYS5 282 aa28.51■■■□□ 2.15
SSH2-211ENST00000590153 GAPVD1Q14C86 1478 aa28.41■■■□□ 2.14
SSH2-211ENST00000590153 ABCA5Q8WWZ7 1642 aa28.4■■■□□ 2.14
SSH2-211ENST00000590153 GRIN2BQ13224 1484 aa28.4■■■□□ 2.14
SSH2-211ENST00000590153 RIMBP3CA6NJZ7 1639 aa28.39■■■□□ 2.13
SSH2-211ENST00000590153 RIMBP3BA6NNM3 1639 aa28.39■■■□□ 2.13
SSH2-211ENST00000590153 RIMBP3Q9UFD9 1639 aa28.39■■■□□ 2.13
SSH2-211ENST00000590153 PBRM1Q86U86 1689 aa28.33■■■□□ 2.13
SSH2-211ENST00000590153 SNAPC4Q5SXM2 1469 aa28.32■■■□□ 2.12
SSH2-211ENST00000590153 MAGI1Q96QZ7 1491 aaPredicted RBP28.31■■■□□ 2.12
SSH2-211ENST00000590153 TRIM41Q8WV44 630 aa28.3■■■□□ 2.12
SSH2-211ENST00000590153 ARHGEF11O15085 1522 aa28.27■■■□□ 2.12
SSH2-211ENST00000590153 SYNJ2O15056 1496 aa28.2■■■□□ 2.1
SSH2-211ENST00000590153 ERICH3Q5RHP9 1530 aa28.19■■■□□ 2.1
SSH2-211ENST00000590153 FBLN2P98095 1184 aa28.19■■■□□ 2.1
SSH2-211ENST00000590153 CHMP7Q8WUX9 453 aaPredicted RBP28.18■■■□□ 2.1
SSH2-211ENST00000590153 CLASP1Q7Z460 1538 aa28.17■■■□□ 2.1
SSH2-211ENST00000590153 IGF1RP08069 1367 aa28.12■■■□□ 2.09
SSH2-211ENST00000590153 KIF27Q86VH2 1401 aa28.12■■■□□ 2.09
SSH2-211ENST00000590153 FHAD1B1AJZ9 1412 aa28.09■■■□□ 2.09
SSH2-211ENST00000590153 ADAMTS12P58397 1594 aa28.09■■■□□ 2.09
SSH2-211ENST00000590153 ARAP1Q96P48 1450 aa28.04■■■□□ 2.08
SSH2-211ENST00000590153 GRIN2AQ12879 1464 aa28.02■■■□□ 2.08
SSH2-211ENST00000590153 RUSC2Q8N2Y8 1516 aa27.97■■■□□ 2.07
SSH2-211ENST00000590153 NUP160Q12769 1436 aa27.95■■■□□ 2.07
SSH2-211ENST00000590153 CHIC1Q5VXU3 224 aa27.9■■■□□ 2.06
SSH2-211ENST00000590153 CUL7Q14999 1698 aa27.9■■■□□ 2.06
SSH2-211ENST00000590153 CEP170Q5SW79 1584 aa27.9■■■□□ 2.06
SSH2-211ENST00000590153 CARMIL1Q5VZK9 1371 aa27.89■■■□□ 2.06
SSH2-211ENST00000590153 CYB5RLQ6IPT4 315 aa27.86■■■□□ 2.05
SSH2-211ENST00000590153 ERCC6L2Q5T890 1561 aa27.81■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms