RNA–Protein interactions for RNA: ENST00000492823.1

ZC3H11A-211, Transcript of zinc finger CCCH-type containing 11A, humanhuman

TSL 3

Gene ZC3H11A, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H11A-211ENST00000492823 AEBP2Q6ZN18 517 aaPredicted RBP31.44■■■□□ 2.62
ZC3H11A-211ENST00000492823 CHIC1Q5VXU3 224 aa29.68■■■□□ 2.34
ZC3H11A-211ENST00000492823 SENP3Q9H4L4 574 aaPredicted RBP26.73■■□□□ 1.87
ZC3H11A-211ENST00000492823 PHF23Q9BUL5 403 aaPredicted RBP26.42■■□□□ 1.82
ZC3H11A-211ENST00000492823 FOXD1Q16676 465 aa25■■□□□ 1.59
ZC3H11A-211ENST00000492823 PLPPR3Q6T4P5 718 aa23.62■■□□□ 1.37
ZC3H11A-211ENST00000492823 MSH5O43196 834 aa23.36■■□□□ 1.33
ZC3H11A-211ENST00000492823 PPP6R1Q9UPN7 881 aa23.32■■□□□ 1.32
ZC3H11A-211ENST00000492823 PIAS4Q8N2W9 510 aaPredicted RBP23.3■■□□□ 1.32
ZC3H11A-211ENST00000492823 ADRA2BP18089 450 aa23.22■■□□□ 1.31
ZC3H11A-211ENST00000492823 POTEDQ86YR6 584 aa23.08■■□□□ 1.29
ZC3H11A-211ENST00000492823 MAPK8IP2Q13387 824 aaPredicted RBP21.38■■□□□ 1.01
ZC3H11A-211ENST00000492823 DMRT2Q9Y5R5 561 aa21.2■□□□□ 0.98
ZC3H11A-211ENST00000492823 SCAF1Q9H7N4 1312 aaKnown RBP21.13■□□□□ 0.97
ZC3H11A-211ENST00000492823 PPP4R3CPQ6ZMV5 832 aa20.73■□□□□ 0.91
ZC3H11A-211ENST00000492823 HOXD11P31277 338 aaPredicted RBP20.38■□□□□ 0.85
ZC3H11A-211ENST00000492823 DCAF8L1A6NGE4 600 aa20.35■□□□□ 0.85
ZC3H11A-211ENST00000492823 CNKSR2Q8WXI2 1034 aa20.34■□□□□ 0.85
ZC3H11A-211ENST00000492823 NISCHQ9Y2I1 1504 aa20.21■□□□□ 0.83
ZC3H11A-211ENST00000492823 RNF216Q9NWF9 866 aaPredicted RBP20.18■□□□□ 0.82
ZC3H11A-211ENST00000492823 CACNB1Q02641 598 aaPredicted RBP20.15■□□□□ 0.82
ZC3H11A-211ENST00000492823 RNF39Q9H2S5 420 aa19.97■□□□□ 0.79
ZC3H11A-211ENST00000492823 NCBP3Q53F19 620 aaKnown RBP19.82■□□□□ 0.76
ZC3H11A-211ENST00000492823 DNAJC5BQ9UF47 199 aa19.64■□□□□ 0.73
ZC3H11A-211ENST00000492823 NPM3O75607 178 aaKnown RBP19.62■□□□□ 0.73
ZC3H11A-211ENST00000492823 C1QBPQ07021 282 aaKnown RBP19.62■□□□□ 0.73
ZC3H11A-211ENST00000492823 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.4■□□□□ 0.76e-7■□□□□ 9.3
ZC3H11A-211ENST00000492823 KCNA4P22459 653 aa19.16■□□□□ 0.66
ZC3H11A-211ENST00000492823 U3KPZ7 1027 aaPredicted RBP19.03■□□□□ 0.64
ZC3H11A-211ENST00000492823 SPINK5Q9NQ38 1064 aaPredicted RBP18.81■□□□□ 0.6
ZC3H11A-211ENST00000492823 SLC4A2P04920 1241 aa18.79■□□□□ 0.6
ZC3H11A-211ENST00000492823 CAPN15O75808 1086 aa18.73■□□□□ 0.59
ZC3H11A-211ENST00000492823 DSG3P32926 999 aa18.67■□□□□ 0.58
ZC3H11A-211ENST00000492823 TRHP20396 242 aaPredicted RBP18.42■□□□□ 0.54
ZC3H11A-211ENST00000492823 APLP2Q06481 763 aa18.36■□□□□ 0.53
ZC3H11A-211ENST00000492823 ABCB7O75027 752 aa18.34■□□□□ 0.53
ZC3H11A-211ENST00000492823 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.33■□□□□ 0.52
ZC3H11A-211ENST00000492823 HNRNPUL2Q1KMD3 747 aaKnown RBP18.33■□□□□ 0.52
ZC3H11A-211ENST00000492823 ZNF219Q9P2Y4 722 aaPredicted RBP18.33■□□□□ 0.52
ZC3H11A-211ENST00000492823 SAMD1Q6SPF0 538 aaPredicted RBP18.25■□□□□ 0.51
ZC3H11A-211ENST00000492823 MYCNP04198 464 aaPredicted RBP18.11■□□□□ 0.49
ZC3H11A-211ENST00000492823 POTEHQ6S545 545 aa18.05■□□□□ 0.48
ZC3H11A-211ENST00000492823 SLC4A1APQ9BWU0 796 aaKnown RBP18.02■□□□□ 0.48
ZC3H11A-211ENST00000492823 POLA2Q14181 598 aa17.89■□□□□ 0.45
ZC3H11A-211ENST00000492823 FOXD4L1Q9NU39 408 aa17.87■□□□□ 0.45
ZC3H11A-211ENST00000492823 ATF5Q9Y2D1 282 aaPredicted RBP17.8■□□□□ 0.44
ZC3H11A-211ENST00000492823 CCDC180Q9P1Z9 1646 aa17.79■□□□□ 0.44
ZC3H11A-211ENST00000492823 RBM42Q9BTD8 480 aaKnown RBP17.74■□□□□ 0.43
ZC3H11A-211ENST00000492823 ZBTB22O15209 634 aa17.65■□□□□ 0.42
ZC3H11A-211ENST00000492823 ABCC9O60706 1549 aa17.5■□□□□ 0.39
ZC3H11A-211ENST00000492823 CHRDL2Q6WN34 429 aa17.45■□□□□ 0.38
ZC3H11A-211ENST00000492823 ZBTB12Q9Y330 459 aaPredicted RBP17.44■□□□□ 0.38
ZC3H11A-211ENST00000492823 OSCARQ8IYS5 282 aa17.35■□□□□ 0.37
ZC3H11A-211ENST00000492823 AKT1S1Q96B36 256 aa17.34■□□□□ 0.37
ZC3H11A-211ENST00000492823 ATXN8OSP0DMR3 200 aa17.29■□□□□ 0.36
ZC3H11A-211ENST00000492823 REM2Q8IYK8 340 aaPredicted RBP17.21■□□□□ 0.35
ZC3H11A-211ENST00000492823 PITPNM1O00562 1244 aa17.05■□□□□ 0.32
ZC3H11A-211ENST00000492823 PIP4P2Q8N4L2 257 aa17.04■□□□□ 0.32
ZC3H11A-211ENST00000492823 FBLN2P98095 1184 aa16.99■□□□□ 0.31
ZC3H11A-211ENST00000492823 ZCCHC6Q5VYS8 1495 aaKnown RBP16.95■□□□□ 0.3
ZC3H11A-211ENST00000492823 MKRN4PQ13434 485 aaPredicted RBP16.95■□□□□ 0.3
ZC3H11A-211ENST00000492823 SPDYE2BA6NHP3 402 aa16.93■□□□□ 0.3
ZC3H11A-211ENST00000492823 SPDYE6P0CI01 402 aa16.93■□□□□ 0.3
ZC3H11A-211ENST00000492823 SPDYE2Q495Y8 402 aa16.93■□□□□ 0.3
ZC3H11A-211ENST00000492823 FXR2P51116 673 aaKnown RBP eCLIP16.91■□□□□ 0.3
ZC3H11A-211ENST00000492823 SP7Q8TDD2 431 aaPredicted RBP16.85■□□□□ 0.29
ZC3H11A-211ENST00000492823 DCAF1Q9Y4B6 1507 aa16.75■□□□□ 0.27
ZC3H11A-211ENST00000492823 HAX1O00165 279 aa16.74■□□□□ 0.27
ZC3H11A-211ENST00000492823 ZNF692Q9BU19 519 aaPredicted RBP16.73■□□□□ 0.27
ZC3H11A-211ENST00000492823 SSUH2Q9Y2M2 353 aa16.73■□□□□ 0.27
ZC3H11A-211ENST00000492823 CSRNP3Q8WYN3 585 aa16.7■□□□□ 0.26
ZC3H11A-211ENST00000492823 CLEC11AQ9Y240 323 aa16.68■□□□□ 0.26
ZC3H11A-211ENST00000492823 SPDYE1Q8NFV5 336 aaPredicted RBP16.66■□□□□ 0.26
ZC3H11A-211ENST00000492823 MYO15BQ96JP2 1530 aa16.64■□□□□ 0.25
ZC3H11A-211ENST00000492823 DCAF8L2P0C7V8 631 aa16.62■□□□□ 0.25
ZC3H11A-211ENST00000492823 EVX2Q03828 476 aa16.6■□□□□ 0.25
ZC3H11A-211ENST00000492823 PRKAR2AP13861 404 aaKnown RBP16.59■□□□□ 0.25
ZC3H11A-211ENST00000492823 NACADO15069 1562 aa16.58■□□□□ 0.24
ZC3H11A-211ENST00000492823 PABPN1Q86U42 306 aaKnown RBP eCLIP16.49■□□□□ 0.23
ZC3H11A-211ENST00000492823 RB1CC1Q8TDY2 1594 aa16.49■□□□□ 0.23
ZC3H11A-211ENST00000492823 CHADLQ6NUI6 762 aa16.42■□□□□ 0.22
ZC3H11A-211ENST00000492823 EHMT2Q96KQ7 1210 aa16.41■□□□□ 0.22
ZC3H11A-211ENST00000492823 C19orf67A6NJJ6 358 aa16.37■□□□□ 0.21
ZC3H11A-211ENST00000492823 PRR29P0C7W0 189 aa16.36■□□□□ 0.21
ZC3H11A-211ENST00000492823 SCRIBQ14160 1630 aa16.27■□□□□ 0.2
ZC3H11A-211ENST00000492823 SHROOM4Q9ULL8 1493 aa16.23■□□□□ 0.19
ZC3H11A-211ENST00000492823 UNC13AQ9UPW8 1703 aa16.19■□□□□ 0.18
ZC3H11A-211ENST00000492823 GABBR2O75899 941 aa16.16■□□□□ 0.18
ZC3H11A-211ENST00000492823 FARP1Q9Y4F1 1045 aaPredicted RBP16.11■□□□□ 0.17
ZC3H11A-211ENST00000492823 CD44P16070 742 aaKnown RBP16.05■□□□□ 0.16
ZC3H11A-211ENST00000492823 SPDYE4A6NLX3 237 aa16.03■□□□□ 0.16
ZC3H11A-211ENST00000492823 BICRAQ9NZM4 1560 aa16.02■□□□□ 0.16
ZC3H11A-211ENST00000492823 CREBZFQ9NS37 354 aa15.97■□□□□ 0.15
ZC3H11A-211ENST00000492823 DNAJC5Q9H3Z4 198 aa15.95■□□□□ 0.14
ZC3H11A-211ENST00000492823 STAG3Q9UJ98 1225 aa15.95■□□□□ 0.14
ZC3H11A-211ENST00000492823 POTEIP0CG38 1075 aa15.87■□□□□ 0.13
ZC3H11A-211ENST00000492823 CECR2Q9BXF3 1484 aa15.81■□□□□ 0.12
ZC3H11A-211ENST00000492823 ZRANB1Q9UGI0 708 aa15.81■□□□□ 0.12
ZC3H11A-211ENST00000492823 LHX8Q68G74 356 aa15.8■□□□□ 0.12
ZC3H11A-211ENST00000492823 ZNF579Q8NAF0 562 aaKnown RBP15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms