RNA–Protein interactions for RNA: ENST00000638800.1

ZC3H11A-213, Transcript of zinc finger CCCH-type containing 11A, humanhuman

TSL 5

Gene ZC3H11A, Length 7,078 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H11A-213ENST00000638800 NISCHQ9Y2I1 1504 aa10.93□□□□□ -0.66
ZC3H11A-213ENST00000638800 DCAF8L2P0C7V8 631 aa9.98□□□□□ -0.81
ZC3H11A-213ENST00000638800 SHROOM4Q9ULL8 1493 aa9.58□□□□□ -0.88
ZC3H11A-213ENST00000638800 SUPT5HO00267 1087 aaKnown RBP9.43□□□□□ -0.9
ZC3H11A-213ENST00000638800 CCDC180Q9P1Z9 1646 aa9.41□□□□□ -0.9
ZC3H11A-213ENST00000638800 ABCC9O60706 1549 aa9.2□□□□□ -0.94
ZC3H11A-213ENST00000638800 ZCCHC6Q5VYS8 1495 aaKnown RBP9.12□□□□□ -0.95
ZC3H11A-213ENST00000638800 SCRIBQ14160 1630 aa8.95□□□□□ -0.98
ZC3H11A-213ENST00000638800 RB1CC1Q8TDY2 1594 aa8.9□□□□□ -0.99
ZC3H11A-213ENST00000638800 NACADO15069 1562 aa8.88□□□□□ -0.99
ZC3H11A-213ENST00000638800 DCAF1Q9Y4B6 1507 aa8.86□□□□□ -0.99
ZC3H11A-213ENST00000638800 PABPN1Q86U42 306 aaKnown RBP eCLIP8.85□□□□□ -0.991e-7■■□□□ 12.5
ZC3H11A-213ENST00000638800 EHMT2Q96KQ7 1210 aa8.84□□□□□ -0.99
ZC3H11A-213ENST00000638800 TRIM41Q8WV44 630 aa8.84□□□□□ -0.99
ZC3H11A-213ENST00000638800 FAM9AQ8IZU1 332 aaPredicted RBP8.79□□□□□ -1
ZC3H11A-213ENST00000638800 MYO15BQ96JP2 1530 aa8.68□□□□□ -1.02
ZC3H11A-213ENST00000638800 CHIC1Q5VXU3 224 aa8.67□□□□□ -1.02
ZC3H11A-213ENST00000638800 APLP2Q06481 763 aa8.65□□□□□ -1.02
ZC3H11A-213ENST00000638800 UBTFP17480 764 aaKnown RBP8.6□□□□□ -1.03
ZC3H11A-213ENST00000638800 RANGAP1P46060 587 aaPredicted RBP8.56□□□□□ -1.04
ZC3H11A-213ENST00000638800 RSF1Q96T23 1441 aaPredicted RBP8.55□□□□□ -1.04
ZC3H11A-213ENST00000638800 BAZ1AQ9NRL2 1556 aaPredicted RBP8.55□□□□□ -1.04
ZC3H11A-213ENST00000638800 TTBK1Q5TCY1 1321 aaPredicted RBP8.5□□□□□ -1.05
ZC3H11A-213ENST00000638800 LOC105371045A0A1W2PR82 267 aa8.49□□□□□ -1.05
ZC3H11A-213ENST00000638800 PCGF6Q9BYE7 350 aa8.49□□□□□ -1.05
ZC3H11A-213ENST00000638800 CECR2Q9BXF3 1484 aa8.48□□□□□ -1.05
ZC3H11A-213ENST00000638800 BAZ1BQ9UIG0 1483 aaKnown RBP8.46□□□□□ -1.06
ZC3H11A-213ENST00000638800 ATP1B4Q9UN42 357 aaPredicted RBP8.46□□□□□ -1.06
ZC3H11A-213ENST00000638800 MROH2BQ7Z745 1585 aa8.44□□□□□ -1.06
ZC3H11A-213ENST00000638800 WIZO95785 1651 aa8.42□□□□□ -1.06
ZC3H11A-213ENST00000638800 SMARCA2P51531 1590 aa8.4□□□□□ -1.07
ZC3H11A-213ENST00000638800 SMARCA4P51532 1647 aa8.39□□□□□ -1.07
ZC3H11A-213ENST00000638800 TRIM26Q12899 539 aaPredicted RBP8.36□□□□□ -1.07
ZC3H11A-213ENST00000638800 TOP2AP11388 1531 aaKnown RBP8.36□□□□□ -1.07
ZC3H11A-213ENST00000638800 PPARGC1BQ86YN6 1023 aaKnown RBP8.35□□□□□ -1.07
ZC3H11A-213ENST00000638800 UNC13AQ9UPW8 1703 aa8.33□□□□□ -1.08
ZC3H11A-213ENST00000638800 ZEB1P37275 1124 aaPredicted RBP8.32□□□□□ -1.08
ZC3H11A-213ENST00000638800 CSRNP3Q8WYN3 585 aa8.31□□□□□ -1.08
ZC3H11A-213ENST00000638800 CCDC88BA6NC98 1476 aa8.31□□□□□ -1.08
ZC3H11A-213ENST00000638800 CCER1Q8TC90 406 aaPredicted RBP8.3□□□□□ -1.08
ZC3H11A-213ENST00000638800 WRNQ14191 1432 aaPredicted RBP eCLIP8.27□□□□□ -1.09
ZC3H11A-213ENST00000638800 ATAD2BQ9ULI0 1458 aa8.26□□□□□ -1.09
ZC3H11A-213ENST00000638800 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.24□□□□□ -1.09
ZC3H11A-213ENST00000638800 HNRNPUL2Q1KMD3 747 aaKnown RBP8.24□□□□□ -1.09
ZC3H11A-213ENST00000638800 EEA1Q15075 1411 aa8.23□□□□□ -1.09
ZC3H11A-213ENST00000638800 EIF4G1Q04637 1599 aaKnown RBP8.21□□□□□ -1.1
ZC3H11A-213ENST00000638800 ABCC8Q09428 1581 aa8.21□□□□□ -1.1
ZC3H11A-213ENST00000638800 BICRAQ9NZM4 1560 aa8.2□□□□□ -1.1
ZC3H11A-213ENST00000638800 FBLN2P98095 1184 aa8.2□□□□□ -1.1
ZC3H11A-213ENST00000638800 GOLGA3Q08378 1498 aa8.18□□□□□ -1.1
ZC3H11A-213ENST00000638800 ITGAEP38570 1179 aa8.17□□□□□ -1.1
ZC3H11A-213ENST00000638800 KIF27Q86VH2 1401 aa8.16□□□□□ -1.1
ZC3H11A-213ENST00000638800 ERCC6Q03468 1493 aa8.16□□□□□ -1.1
ZC3H11A-213ENST00000638800 CEP164Q9UPV0 1460 aa8.14□□□□□ -1.11
ZC3H11A-213ENST00000638800 P3H3Q8IVL6 736 aa8.13□□□□□ -1.11
ZC3H11A-213ENST00000638800 HRCP23327 699 aa8.12□□□□□ -1.11
ZC3H11A-213ENST00000638800 PDS5BQ9NTI5 1447 aa8.12□□□□□ -1.11
ZC3H11A-213ENST00000638800 NCAPD3P42695 1498 aa8.12□□□□□ -1.11
ZC3H11A-213ENST00000638800 FAM50AQ14320 339 aaKnown RBP8.11□□□□□ -1.11
ZC3H11A-213ENST00000638800 CC2D2AQ9P2K1 1620 aa8.11□□□□□ -1.11
ZC3H11A-213ENST00000638800 CADPSQ9ULU8 1353 aa8.11□□□□□ -1.11
ZC3H11A-213ENST00000638800 CLIP1P30622 1438 aa8.1□□□□□ -1.11
ZC3H11A-213ENST00000638800 HMGXB3Q12766 1538 aa8.1□□□□□ -1.11
ZC3H11A-213ENST00000638800 SOGA1O94964 1423 aa8.09□□□□□ -1.11
ZC3H11A-213ENST00000638800 CEP162Q5TB80 1403 aa8.09□□□□□ -1.11
ZC3H11A-213ENST00000638800 TNIKQ9UKE5 1360 aa8.08□□□□□ -1.12
ZC3H11A-213ENST00000638800 CUX2O14529 1486 aa8.08□□□□□ -1.12
ZC3H11A-213ENST00000638800 MYT1LQ9UL68 1186 aa8.07□□□□□ -1.12
ZC3H11A-213ENST00000638800 CHMP7Q8WUX9 453 aaPredicted RBP8.06□□□□□ -1.12
ZC3H11A-213ENST00000638800 FANCD2Q9BXW9 1451 aa8.05□□□□□ -1.12
ZC3H11A-213ENST00000638800 PEG3Q9GZU2 1588 aa8.04□□□□□ -1.12
ZC3H11A-213ENST00000638800 CDK11AQ9UQ88 783 aaPredicted RBP8.02□□□□□ -1.13
ZC3H11A-213ENST00000638800 CARMIL1Q5VZK9 1371 aa8.02□□□□□ -1.13
ZC3H11A-213ENST00000638800 ARID3CA6NKF2 412 aa8.02□□□□□ -1.13
ZC3H11A-213ENST00000638800 CFTRP13569 1480 aa7.98□□□□□ -1.13
ZC3H11A-213ENST00000638800 TRIM52Q96A61 297 aa7.97□□□□□ -1.13
ZC3H11A-213ENST00000638800 SYNJ1O43426 1573 aa7.96□□□□□ -1.13
ZC3H11A-213ENST00000638800 MTUS2Q5JR59 1369 aa7.95□□□□□ -1.14
ZC3H11A-213ENST00000638800 FGD5Q6ZNL6 1462 aa7.95□□□□□ -1.14
ZC3H11A-213ENST00000638800 TOP2BQ02880 1626 aa7.95□□□□□ -1.14
ZC3H11A-213ENST00000638800 RUSC2Q8N2Y8 1516 aa7.94□□□□□ -1.14
ZC3H11A-213ENST00000638800 RAPGEF2Q9Y4G8 1499 aa7.94□□□□□ -1.14
ZC3H11A-213ENST00000638800 FHAD1B1AJZ9 1412 aa7.94□□□□□ -1.14
ZC3H11A-213ENST00000638800 TDRD9Q8NDG6 1382 aaKnown RBP7.93□□□□□ -1.14
ZC3H11A-213ENST00000638800 CENPBP07199 599 aaPredicted RBP7.93□□□□□ -1.14
ZC3H11A-213ENST00000638800 ZNF777Q9ULD5 760 aaPredicted RBP7.92□□□□□ -1.14
ZC3H11A-213ENST00000638800 LAMC3Q9Y6N6 1575 aa7.92□□□□□ -1.14
ZC3H11A-213ENST00000638800 NESP48681 1621 aa7.91□□□□□ -1.14
ZC3H11A-213ENST00000638800 NEUROD1Q13562 356 aa7.91□□□□□ -1.14
ZC3H11A-213ENST00000638800 VPS8Q8N3P4 1428 aa7.91□□□□□ -1.14
ZC3H11A-213ENST00000638800 KIF21BO75037 1637 aa7.9□□□□□ -1.14
ZC3H11A-213ENST00000638800 CUX1P39880 1505 aa7.9□□□□□ -1.14
ZC3H11A-213ENST00000638800 NPM1P06748 294 aaKnown RBP eCLIP7.89□□□□□ -1.15
ZC3H11A-213ENST00000638800 DNMBPQ6XZF7 1577 aa7.89□□□□□ -1.15
ZC3H11A-213ENST00000638800 RAD54L2Q9Y4B4 1467 aa7.88□□□□□ -1.15
ZC3H11A-213ENST00000638800 GAPVD1Q14C86 1478 aa7.88□□□□□ -1.15
ZC3H11A-213ENST00000638800 PRDM2Q13029 1718 aa7.88□□□□□ -1.15
ZC3H11A-213ENST00000638800 PELP1Q8IZL8 1130 aaKnown RBP7.88□□□□□ -1.15
ZC3H11A-213ENST00000638800 MRC2Q9UBG0 1479 aa7.87□□□□□ -1.15
ZC3H11A-213ENST00000638800 TOPBP1Q92547 1522 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms