RNA–Protein interactions for RNA: ENST00000572248.1

DPH1-209, Transcript of diphthamide biosynthesis 1, humanhuman

TSL 2

Gene DPH1, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DPH1-209ENST00000572248 NISCHQ9Y2I1 1504 aa45.12■■■■■ 4.81
DPH1-209ENST00000572248 ABCC9O60706 1549 aa41.23■■■■■ 4.19
DPH1-209ENST00000572248 CCDC180Q9P1Z9 1646 aa40.76■■■■■ 4.12
DPH1-209ENST00000572248 DNAJC5BQ9UF47 199 aa39.21■■■■□ 3.87
DPH1-209ENST00000572248 RB1CC1Q8TDY2 1594 aa39■■■■□ 3.83
DPH1-209ENST00000572248 NACADO15069 1562 aa38.62■■■■□ 3.77
DPH1-209ENST00000572248 UNC13AQ9UPW8 1703 aa38.31■■■■□ 3.72
DPH1-209ENST00000572248 PABPN1Q86U42 306 aaKnown RBP eCLIP38.28■■■■□ 3.72
DPH1-209ENST00000572248 DCAF8L2P0C7V8 631 aa38.2■■■■□ 3.71
DPH1-209ENST00000572248 BICRAQ9NZM4 1560 aa37.99■■■■□ 3.67
DPH1-209ENST00000572248 MYO15BQ96JP2 1530 aa37.92■■■■□ 3.66
DPH1-209ENST00000572248 SHROOM4Q9ULL8 1493 aa37.31■■■■□ 3.56
DPH1-209ENST00000572248 ZCCHC6Q5VYS8 1495 aaKnown RBP37.29■■■■□ 3.56
DPH1-209ENST00000572248 CC2D2AQ9P2K1 1620 aa37.27■■■■□ 3.56
DPH1-209ENST00000572248 DCAF1Q9Y4B6 1507 aa37.24■■■■□ 3.55
DPH1-209ENST00000572248 CECR2Q9BXF3 1484 aa37.19■■■■□ 3.54
DPH1-209ENST00000572248 SCRIBQ14160 1630 aa37.09■■■■□ 3.53
DPH1-209ENST00000572248 EIF4G1Q04637 1599 aaKnown RBP37.04■■■■□ 3.52
DPH1-209ENST00000572248 DNAJC5Q9H3Z4 198 aa36.33■■■■□ 3.41
DPH1-209ENST00000572248 CUX2O14529 1486 aa35.74■■■■□ 3.31
DPH1-209ENST00000572248 NCAPD3P42695 1498 aa35.66■■■■□ 3.3
DPH1-209ENST00000572248 ERCC6Q03468 1493 aa35.58■■■■□ 3.29
DPH1-209ENST00000572248 ATAD2BQ9ULI0 1458 aa35.48■■■■□ 3.27
DPH1-209ENST00000572248 HMGXB3Q12766 1538 aa35.36■■■■□ 3.25
DPH1-209ENST00000572248 SMARCA4P51532 1647 aa35.35■■■■□ 3.25
DPH1-209ENST00000572248 SMARCA2P51531 1590 aa35.33■■■■□ 3.25
DPH1-209ENST00000572248 NESP48681 1621 aa35.31■■■■□ 3.24
DPH1-209ENST00000572248 THOC2Q8NI27 1593 aaKnown RBP35.08■■■■□ 3.21
DPH1-209ENST00000572248 BAZ1BQ9UIG0 1483 aaKnown RBP35.07■■■■□ 3.2
DPH1-209ENST00000572248 BAZ1AQ9NRL2 1556 aaPredicted RBP35.04■■■■□ 3.2
DPH1-209ENST00000572248 PEG3Q9GZU2 1588 aa35■■■■□ 3.19
DPH1-209ENST00000572248 LAMC3Q9Y6N6 1575 aa34.94■■■■□ 3.18
DPH1-209ENST00000572248 KIF21AQ7Z4S6 1674 aa34.89■■■■□ 3.18
DPH1-209ENST00000572248 MROH2BQ7Z745 1585 aa34.79■■■■□ 3.16
DPH1-209ENST00000572248 PDS5BQ9NTI5 1447 aa34.7■■■■□ 3.15
DPH1-209ENST00000572248 CADPSQ9ULU8 1353 aa34.52■■■■□ 3.12
DPH1-209ENST00000572248 MRC2Q9UBG0 1479 aa34.47■■■■□ 3.11
DPH1-209ENST00000572248 TRIM41Q8WV44 630 aa34.46■■■■□ 3.11
DPH1-209ENST00000572248 WDR62O43379 1518 aa34.45■■■■□ 3.1
DPH1-209ENST00000572248 WIZO95785 1651 aa34.38■■■■□ 3.09
DPH1-209ENST00000572248 CEP164Q9UPV0 1460 aa34.21■■■■□ 3.07
DPH1-209ENST00000572248 FANCD2Q9BXW9 1451 aa34.14■■■■□ 3.06
DPH1-209ENST00000572248 CFTRP13569 1480 aa34.05■■■■□ 3.04
DPH1-209ENST00000572248 OSCARQ8IYS5 282 aa33.98■■■■□ 3.03
DPH1-209ENST00000572248 URB2Q14146 1524 aaKnown RBP33.94■■■■□ 3.02
DPH1-209ENST00000572248 TOP2AP11388 1531 aaKnown RBP33.84■■■■□ 3.01
DPH1-209ENST00000572248 RSF1Q96T23 1441 aaPredicted RBP33.84■■■■□ 3.01
DPH1-209ENST00000572248 PRDM2Q13029 1718 aa33.77■■■■□ 3
DPH1-209ENST00000572248 RIMBP3CA6NJZ7 1639 aa33.7■■■□□ 2.99
DPH1-209ENST00000572248 RIMBP3BA6NNM3 1639 aa33.7■■■□□ 2.99
DPH1-209ENST00000572248 RIMBP3Q9UFD9 1639 aa33.7■■■□□ 2.99
DPH1-209ENST00000572248 ZNF608Q9ULD9 1512 aaPredicted RBP33.61■■■□□ 2.97
DPH1-209ENST00000572248 IFT140Q96RY7 1462 aa33.55■■■□□ 2.96
DPH1-209ENST00000572248 ARHGEF11O15085 1522 aa33.5■■■□□ 2.95
DPH1-209ENST00000572248 CCDC88BA6NC98 1476 aa33.47■■■□□ 2.95
DPH1-209ENST00000572248 TOPBP1Q92547 1522 aa33.47■■■□□ 2.95
DPH1-209ENST00000572248 EIF4G3O43432 1585 aaKnown RBP33.4■■■□□ 2.94
DPH1-209ENST00000572248 CHD1O14646 1710 aa33.31■■■□□ 2.92
DPH1-209ENST00000572248 ABCC8Q09428 1581 aa33.29■■■□□ 2.92
DPH1-209ENST00000572248 DNMBPQ6XZF7 1577 aa33.29■■■□□ 2.92
DPH1-209ENST00000572248 TARBP1Q13395 1621 aaKnown RBP33.25■■■□□ 2.91
DPH1-209ENST00000572248 CYB5RLQ6IPT4 315 aa33.23■■■□□ 2.91
DPH1-209ENST00000572248 AQRO60306 1485 aaKnown RBP eCLIP33.21■■■□□ 2.915e-8■■■■■ 37.3
DPH1-209ENST00000572248 ARAP1Q96P48 1450 aa33.15■■■□□ 2.9
DPH1-209ENST00000572248 POLA1P09884 1462 aaPredicted RBP33.08■■■□□ 2.89
DPH1-209ENST00000572248 FBLN2P98095 1184 aa33■■■□□ 2.87
DPH1-209ENST00000572248 TRHP20396 242 aaPredicted RBP32.98■■■□□ 2.87
DPH1-209ENST00000572248 RAD54L2Q9Y4B4 1467 aa32.98■■■□□ 2.87
DPH1-209ENST00000572248 TDRD9Q8NDG6 1382 aaKnown RBP32.9■■■□□ 2.86
DPH1-209ENST00000572248 SOGA1O94964 1423 aa32.88■■■□□ 2.85
DPH1-209ENST00000572248 CLASP1Q7Z460 1538 aa32.87■■■□□ 2.85
DPH1-209ENST00000572248 SNAPC4Q5SXM2 1469 aa32.85■■■□□ 2.85
DPH1-209ENST00000572248 WDR97A6NE52 1622 aa32.82■■■□□ 2.84
DPH1-209ENST00000572248 FGD5Q6ZNL6 1462 aa32.79■■■□□ 2.84
DPH1-209ENST00000572248 SYNJ1O43426 1573 aa32.75■■■□□ 2.83
DPH1-209ENST00000572248 MAGI1Q96QZ7 1491 aaPredicted RBP32.73■■■□□ 2.83
DPH1-209ENST00000572248 CUX1P39880 1505 aa32.72■■■□□ 2.83
DPH1-209ENST00000572248 CHMP7Q8WUX9 453 aaPredicted RBP32.68■■■□□ 2.82
DPH1-209ENST00000572248 GRIN2BQ13224 1484 aa32.66■■■□□ 2.82
DPH1-209ENST00000572248 SYNJ2O15056 1496 aa32.62■■■□□ 2.81
DPH1-209ENST00000572248 PBRM1Q86U86 1689 aa32.59■■■□□ 2.81
DPH1-209ENST00000572248 GAPVD1Q14C86 1478 aa32.49■■■□□ 2.79
DPH1-209ENST00000572248 ABCA5Q8WWZ7 1642 aa32.44■■■□□ 2.78
DPH1-209ENST00000572248 ABCA10Q8WWZ4 1543 aa32.4■■■□□ 2.78
DPH1-209ENST00000572248 AEBP2Q6ZN18 517 aaPredicted RBP32.38■■■□□ 2.77
DPH1-209ENST00000572248 ERCC6L2Q5T890 1561 aa32.35■■■□□ 2.77
DPH1-209ENST00000572248 GRIN2AQ12879 1464 aa32.26■■■□□ 2.75
DPH1-209ENST00000572248 CEP170Q5SW79 1584 aa32.22■■■□□ 2.75
DPH1-209ENST00000572248 ADAMTS12P58397 1594 aa32.21■■■□□ 2.75
DPH1-209ENST00000572248 NUP160Q12769 1436 aa32.19■■■□□ 2.74
DPH1-209ENST00000572248 SHROOM2Q13796 1616 aa32.16■■■□□ 2.74
DPH1-209ENST00000572248 WRNQ14191 1432 aaPredicted RBP eCLIP32.1■■■□□ 2.73
DPH1-209ENST00000572248 KIF13AQ9H1H9 1805 aa32.09■■■□□ 2.73
DPH1-209ENST00000572248 BIVM-ERCC5R4GMW8 1640 aa32.07■■■□□ 2.72
DPH1-209ENST00000572248 FHAD1B1AJZ9 1412 aa32.04■■■□□ 2.72
DPH1-209ENST00000572248 TOP2BQ02880 1626 aa32.04■■■□□ 2.72
DPH1-209ENST00000572248 ERICH3Q5RHP9 1530 aa31.96■■■□□ 2.71
DPH1-209ENST00000572248 PRG4Q92954 1404 aaPredicted RBP31.89■■■□□ 2.7
DPH1-209ENST00000572248 SUPT5HO00267 1087 aaKnown RBP31.86■■■□□ 2.69
DPH1-209ENST00000572248 JPH4Q96JJ6 628 aa31.81■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms