RNA–Protein interactions for RNA: ENST00000640304.1

RTKN-211, Transcript of rhotekin, humanhuman

TSL 5

Gene RTKN, Length 612 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTKN-211ENST00000640304 NISCHQ9Y2I1 1504 aa35.12■■■■□ 3.21
RTKN-211ENST00000640304 CCDC180Q9P1Z9 1646 aa30.91■■■□□ 2.54
RTKN-211ENST00000640304 ZCCHC6Q5VYS8 1495 aaKnown RBP29.55■■■□□ 2.32
RTKN-211ENST00000640304 DCAF1Q9Y4B6 1507 aa29.23■■■□□ 2.27
RTKN-211ENST00000640304 MYO15BQ96JP2 1530 aa28.96■■■□□ 2.23
RTKN-211ENST00000640304 ABCC9O60706 1549 aa28.91■■■□□ 2.22
RTKN-211ENST00000640304 NACADO15069 1562 aa28.69■■■□□ 2.18
RTKN-211ENST00000640304 DCAF8L2P0C7V8 631 aa28.47■■■□□ 2.15
RTKN-211ENST00000640304 RB1CC1Q8TDY2 1594 aa28.43■■■□□ 2.14
RTKN-211ENST00000640304 SHROOM4Q9ULL8 1493 aa28.15■■■□□ 2.1
RTKN-211ENST00000640304 SCRIBQ14160 1630 aa28.1■■■□□ 2.09
RTKN-211ENST00000640304 UNC13AQ9UPW8 1703 aa27.94■■■□□ 2.06
RTKN-211ENST00000640304 BICRAQ9NZM4 1560 aa27.59■■■□□ 2.01
RTKN-211ENST00000640304 BAZ1AQ9NRL2 1556 aaPredicted RBP27.17■■□□□ 1.94
RTKN-211ENST00000640304 CECR2Q9BXF3 1484 aa27.16■■□□□ 1.94
RTKN-211ENST00000640304 RSF1Q96T23 1441 aaPredicted RBP27.11■■□□□ 1.93
RTKN-211ENST00000640304 SMARCA4P51532 1647 aa27.07■■□□□ 1.92
RTKN-211ENST00000640304 PABPN1Q86U42 306 aaKnown RBP eCLIP27.06■■□□□ 1.929e-7■□□□□ 8.3
RTKN-211ENST00000640304 MROH2BQ7Z745 1585 aa27.05■■□□□ 1.92
RTKN-211ENST00000640304 SUPT5HO00267 1087 aaKnown RBP26.96■■□□□ 1.91
RTKN-211ENST00000640304 PEG3Q9GZU2 1588 aa26.87■■□□□ 1.89
RTKN-211ENST00000640304 WIZO95785 1651 aa26.84■■□□□ 1.89
RTKN-211ENST00000640304 EIF4G1Q04637 1599 aaKnown RBP26.72■■□□□ 1.87
RTKN-211ENST00000640304 TOP2AP11388 1531 aaKnown RBP26.67■■□□□ 1.86
RTKN-211ENST00000640304 SMARCA2P51531 1590 aa26.64■■□□□ 1.86
RTKN-211ENST00000640304 ATAD2BQ9ULI0 1458 aa26.57■■□□□ 1.84
RTKN-211ENST00000640304 HMGXB3Q12766 1538 aa26.48■■□□□ 1.83
RTKN-211ENST00000640304 NCAPD3P42695 1498 aa26.42■■□□□ 1.82
RTKN-211ENST00000640304 BAZ1BQ9UIG0 1483 aaKnown RBP26.39■■□□□ 1.82
RTKN-211ENST00000640304 CC2D2AQ9P2K1 1620 aa26.32■■□□□ 1.8
RTKN-211ENST00000640304 CCDC88BA6NC98 1476 aa26.24■■□□□ 1.79
RTKN-211ENST00000640304 CHIC1Q5VXU3 224 aa25.93■■□□□ 1.74
RTKN-211ENST00000640304 PRDM2Q13029 1718 aa25.88■■□□□ 1.73
RTKN-211ENST00000640304 CFTRP13569 1480 aa25.78■■□□□ 1.72
RTKN-211ENST00000640304 CADPSQ9ULU8 1353 aa25.63■■□□□ 1.69
RTKN-211ENST00000640304 ABCC8Q09428 1581 aa25.62■■□□□ 1.69
RTKN-211ENST00000640304 LAMC3Q9Y6N6 1575 aa25.59■■□□□ 1.69
RTKN-211ENST00000640304 WRNQ14191 1432 aaPredicted RBP eCLIP25.51■■□□□ 1.67
RTKN-211ENST00000640304 BIVM-ERCC5R4GMW8 1640 aa25.5■■□□□ 1.67
RTKN-211ENST00000640304 DNAJC5BQ9UF47 199 aa25.48■■□□□ 1.67
RTKN-211ENST00000640304 SYNJ1O43426 1573 aa25.48■■□□□ 1.67
RTKN-211ENST00000640304 TRIM41Q8WV44 630 aa25.47■■□□□ 1.67
RTKN-211ENST00000640304 TOP2BQ02880 1626 aa25.46■■□□□ 1.67
RTKN-211ENST00000640304 NESP48681 1621 aa25.37■■□□□ 1.65
RTKN-211ENST00000640304 FANCD2Q9BXW9 1451 aa25.36■■□□□ 1.65
RTKN-211ENST00000640304 CUX1P39880 1505 aa25.34■■□□□ 1.65
RTKN-211ENST00000640304 PDS5BQ9NTI5 1447 aa25.26■■□□□ 1.63
RTKN-211ENST00000640304 KIF21AQ7Z4S6 1674 aa25.24■■□□□ 1.63
RTKN-211ENST00000640304 CEP164Q9UPV0 1460 aa25.24■■□□□ 1.63
RTKN-211ENST00000640304 DNMBPQ6XZF7 1577 aa25.22■■□□□ 1.63
RTKN-211ENST00000640304 EEA1Q15075 1411 aa25.2■■□□□ 1.62
RTKN-211ENST00000640304 TOPBP1Q92547 1522 aa25.12■■□□□ 1.61
RTKN-211ENST00000640304 URB2Q14146 1524 aaKnown RBP25.08■■□□□ 1.61
RTKN-211ENST00000640304 SOGA1O94964 1423 aa25.05■■□□□ 1.6
RTKN-211ENST00000640304 FGD5Q6ZNL6 1462 aa25.05■■□□□ 1.6
RTKN-211ENST00000640304 MRC2Q9UBG0 1479 aa25■■□□□ 1.59
RTKN-211ENST00000640304 WDR97A6NE52 1622 aa24.98■■□□□ 1.59
RTKN-211ENST00000640304 POLA1P09884 1462 aaPredicted RBP24.97■■□□□ 1.59
RTKN-211ENST00000640304 RUSC2Q8N2Y8 1516 aa24.96■■□□□ 1.59
RTKN-211ENST00000640304 WDR62O43379 1518 aa24.96■■□□□ 1.59
RTKN-211ENST00000640304 KIF21BO75037 1637 aa24.94■■□□□ 1.58
RTKN-211ENST00000640304 THOC2Q8NI27 1593 aaKnown RBP24.93■■□□□ 1.58
RTKN-211ENST00000640304 ABCA10Q8WWZ4 1543 aa24.91■■□□□ 1.58
RTKN-211ENST00000640304 KIF27Q86VH2 1401 aa24.88■■□□□ 1.57
RTKN-211ENST00000640304 TARBP1Q13395 1621 aaKnown RBP24.83■■□□□ 1.57
RTKN-211ENST00000640304 FAM9AQ8IZU1 332 aaPredicted RBP24.82■■□□□ 1.56
RTKN-211ENST00000640304 CSRNP3Q8WYN3 585 aa24.82■■□□□ 1.56
RTKN-211ENST00000640304 ERCC6Q03468 1493 aa24.82■■□□□ 1.56
RTKN-211ENST00000640304 CUX2O14529 1486 aa24.8■■□□□ 1.56
RTKN-211ENST00000640304 ABCA5Q8WWZ7 1642 aa24.79■■□□□ 1.56
RTKN-211ENST00000640304 ERICH3Q5RHP9 1530 aa24.79■■□□□ 1.56
RTKN-211ENST00000640304 GOLGA3Q08378 1498 aa24.77■■□□□ 1.56
RTKN-211ENST00000640304 RAD54L2Q9Y4B4 1467 aa24.77■■□□□ 1.56
RTKN-211ENST00000640304 PRXQ9BXM0 1461 aa24.76■■□□□ 1.55
RTKN-211ENST00000640304 LOC105371045A0A1W2PR82 267 aa24.75■■□□□ 1.55
RTKN-211ENST00000640304 CUL7Q14999 1698 aa24.68■■□□□ 1.54
RTKN-211ENST00000640304 IFT140Q96RY7 1462 aa24.67■■□□□ 1.54
RTKN-211ENST00000640304 TNIKQ9UKE5 1360 aa24.64■■□□□ 1.53
RTKN-211ENST00000640304 IGF1RP08069 1367 aa24.63■■□□□ 1.53
RTKN-211ENST00000640304 RAPGEF2Q9Y4G8 1499 aa24.61■■□□□ 1.53
RTKN-211ENST00000640304 PBRM1Q86U86 1689 aa24.6■■□□□ 1.53
RTKN-211ENST00000640304 GAPVD1Q14C86 1478 aa24.58■■□□□ 1.52
RTKN-211ENST00000640304 EIF4G3O43432 1585 aaKnown RBP24.5■■□□□ 1.51
RTKN-211ENST00000640304 CARMIL1Q5VZK9 1371 aa24.48■■□□□ 1.51
RTKN-211ENST00000640304 CEP162Q5TB80 1403 aa24.46■■□□□ 1.51
RTKN-211ENST00000640304 TDRD9Q8NDG6 1382 aaKnown RBP24.46■■□□□ 1.51
RTKN-211ENST00000640304 ADAMTS12P58397 1594 aa24.46■■□□□ 1.51
RTKN-211ENST00000640304 GRIN2BQ13224 1484 aa24.44■■□□□ 1.5
RTKN-211ENST00000640304 ZNF608Q9ULD9 1512 aaPredicted RBP24.43■■□□□ 1.5
RTKN-211ENST00000640304 CTTNBP2Q8WZ74 1663 aa24.39■■□□□ 1.49
RTKN-211ENST00000640304 AQRO60306 1485 aaKnown RBP eCLIP24.38■■□□□ 1.493e-6■■■■□ 19.9
RTKN-211ENST00000640304 UBTFP17480 764 aaKnown RBP24.35■■□□□ 1.49
RTKN-211ENST00000640304 FHAD1B1AJZ9 1412 aa24.34■■□□□ 1.49
RTKN-211ENST00000640304 EHMT2Q96KQ7 1210 aa24.32■■□□□ 1.48
RTKN-211ENST00000640304 MAGI1Q96QZ7 1491 aaPredicted RBP24.32■■□□□ 1.48
RTKN-211ENST00000640304 CLIP1P30622 1438 aa24.29■■□□□ 1.48
RTKN-211ENST00000640304 SNAPC4Q5SXM2 1469 aa24.25■■□□□ 1.47
RTKN-211ENST00000640304 EFCAB5A4FU69 1503 aa24.18■■□□□ 1.46
RTKN-211ENST00000640304 SYNJ2O15056 1496 aa24.17■■□□□ 1.46
RTKN-211ENST00000640304 GRIN2AQ12879 1464 aa24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms