RNA–Protein interactions for RNA: ENST00000566396.1

NKD1-203, Transcript of naked cuticle homolog 1, humanhuman

TSL 3

Gene NKD1, Length 748 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKD1-203ENST00000566396 NISCHQ9Y2I1 1504 aa34.7■■■■□ 3.14
NKD1-203ENST00000566396 ABCC9O60706 1549 aa31.49■■■□□ 2.63
NKD1-203ENST00000566396 CCDC180Q9P1Z9 1646 aa31.39■■■□□ 2.62
NKD1-203ENST00000566396 RB1CC1Q8TDY2 1594 aa30.06■■■□□ 2.4
NKD1-203ENST00000566396 NACADO15069 1562 aa29.81■■■□□ 2.36
NKD1-203ENST00000566396 DNAJC5BQ9UF47 199 aa29.68■■■□□ 2.34
NKD1-203ENST00000566396 MYO15BQ96JP2 1530 aa29.37■■■□□ 2.29
NKD1-203ENST00000566396 DCAF8L2P0C7V8 631 aa29.36■■■□□ 2.29
NKD1-203ENST00000566396 PABPN1Q86U42 306 aaKnown RBP eCLIP29.21■■■□□ 2.275e-11■□□□□ 8.7
NKD1-203ENST00000566396 UNC13AQ9UPW8 1703 aa29.09■■■□□ 2.25
NKD1-203ENST00000566396 SHROOM4Q9ULL8 1493 aa28.97■■■□□ 2.23
NKD1-203ENST00000566396 BICRAQ9NZM4 1560 aa28.95■■■□□ 2.22
NKD1-203ENST00000566396 DCAF1Q9Y4B6 1507 aa28.82■■■□□ 2.2
NKD1-203ENST00000566396 ZCCHC6Q5VYS8 1495 aaKnown RBP28.68■■■□□ 2.18
NKD1-203ENST00000566396 CECR2Q9BXF3 1484 aa28.52■■■□□ 2.16
NKD1-203ENST00000566396 CC2D2AQ9P2K1 1620 aa28.48■■■□□ 2.15
NKD1-203ENST00000566396 EIF4G1Q04637 1599 aaKnown RBP28.38■■■□□ 2.13
NKD1-203ENST00000566396 SCRIBQ14160 1630 aa28.35■■■□□ 2.13
NKD1-203ENST00000566396 DNAJC5Q9H3Z4 198 aa27.8■■■□□ 2.04
NKD1-203ENST00000566396 CUX2O14529 1486 aa27.54■■■□□ 2
NKD1-203ENST00000566396 NCAPD3P42695 1498 aa27.48■■□□□ 1.99
NKD1-203ENST00000566396 ERCC6Q03468 1493 aa27.39■■□□□ 1.98
NKD1-203ENST00000566396 SMARCA2P51531 1590 aa27.3■■□□□ 1.96
NKD1-203ENST00000566396 ATAD2BQ9ULI0 1458 aa27.25■■□□□ 1.95
NKD1-203ENST00000566396 HMGXB3Q12766 1538 aa27.25■■□□□ 1.95
NKD1-203ENST00000566396 SMARCA4P51532 1647 aa27.11■■□□□ 1.93
NKD1-203ENST00000566396 BAZ1AQ9NRL2 1556 aaPredicted RBP27.05■■□□□ 1.92
NKD1-203ENST00000566396 BAZ1BQ9UIG0 1483 aaKnown RBP27.02■■□□□ 1.92
NKD1-203ENST00000566396 PEG3Q9GZU2 1588 aa26.96■■□□□ 1.91
NKD1-203ENST00000566396 LAMC3Q9Y6N6 1575 aa26.93■■□□□ 1.9
NKD1-203ENST00000566396 NESP48681 1621 aa26.87■■□□□ 1.89
NKD1-203ENST00000566396 PDS5BQ9NTI5 1447 aa26.85■■□□□ 1.89
NKD1-203ENST00000566396 THOC2Q8NI27 1593 aaKnown RBP26.79■■□□□ 1.88
NKD1-203ENST00000566396 CADPSQ9ULU8 1353 aa26.61■■□□□ 1.85
NKD1-203ENST00000566396 MROH2BQ7Z745 1585 aa26.6■■□□□ 1.85
NKD1-203ENST00000566396 KIF21AQ7Z4S6 1674 aa26.57■■□□□ 1.84
NKD1-203ENST00000566396 MRC2Q9UBG0 1479 aa26.52■■□□□ 1.84
NKD1-203ENST00000566396 WDR62O43379 1518 aa26.44■■□□□ 1.82
NKD1-203ENST00000566396 CEP164Q9UPV0 1460 aa26.36■■□□□ 1.81
NKD1-203ENST00000566396 TRIM41Q8WV44 630 aa26.32■■□□□ 1.8
NKD1-203ENST00000566396 FANCD2Q9BXW9 1451 aa26.25■■□□□ 1.79
NKD1-203ENST00000566396 WIZO95785 1651 aa26.23■■□□□ 1.79
NKD1-203ENST00000566396 CFTRP13569 1480 aa26.22■■□□□ 1.79
NKD1-203ENST00000566396 OSCARQ8IYS5 282 aa26.21■■□□□ 1.79
NKD1-203ENST00000566396 TOP2AP11388 1531 aaKnown RBP26.05■■□□□ 1.76
NKD1-203ENST00000566396 RSF1Q96T23 1441 aaPredicted RBP26■■□□□ 1.75
NKD1-203ENST00000566396 URB2Q14146 1524 aaKnown RBP25.95■■□□□ 1.74
NKD1-203ENST00000566396 PRDM2Q13029 1718 aa25.9■■□□□ 1.74
NKD1-203ENST00000566396 IFT140Q96RY7 1462 aa25.89■■□□□ 1.73
NKD1-203ENST00000566396 ABCC8Q09428 1581 aa25.88■■□□□ 1.73
NKD1-203ENST00000566396 RIMBP3CA6NJZ7 1639 aa25.7■■□□□ 1.71
NKD1-203ENST00000566396 RIMBP3BA6NNM3 1639 aa25.7■■□□□ 1.71
NKD1-203ENST00000566396 RIMBP3Q9UFD9 1639 aa25.7■■□□□ 1.71
NKD1-203ENST00000566396 TOPBP1Q92547 1522 aa25.68■■□□□ 1.7
NKD1-203ENST00000566396 CCDC88BA6NC98 1476 aa25.68■■□□□ 1.7
NKD1-203ENST00000566396 ARHGEF11O15085 1522 aa25.65■■□□□ 1.7
NKD1-203ENST00000566396 ZNF608Q9ULD9 1512 aaPredicted RBP25.63■■□□□ 1.69
NKD1-203ENST00000566396 DNMBPQ6XZF7 1577 aa25.61■■□□□ 1.69
NKD1-203ENST00000566396 EIF4G3O43432 1585 aaKnown RBP25.56■■□□□ 1.68
NKD1-203ENST00000566396 CYB5RLQ6IPT4 315 aa25.47■■□□□ 1.67
NKD1-203ENST00000566396 WDR97A6NE52 1622 aa25.45■■□□□ 1.67
NKD1-203ENST00000566396 TARBP1Q13395 1621 aaKnown RBP25.45■■□□□ 1.66
NKD1-203ENST00000566396 AQRO60306 1485 aaKnown RBP eCLIP25.4■■□□□ 1.664e-10■■■□□ 18
NKD1-203ENST00000566396 FBLN2P98095 1184 aa25.39■■□□□ 1.66
NKD1-203ENST00000566396 POLA1P09884 1462 aaPredicted RBP25.39■■□□□ 1.65
NKD1-203ENST00000566396 CHD1O14646 1710 aa25.38■■□□□ 1.65
NKD1-203ENST00000566396 TRHP20396 242 aaPredicted RBP25.35■■□□□ 1.65
NKD1-203ENST00000566396 SOGA1O94964 1423 aa25.33■■□□□ 1.65
NKD1-203ENST00000566396 ARAP1Q96P48 1450 aa25.31■■□□□ 1.64
NKD1-203ENST00000566396 MAGI1Q96QZ7 1491 aaPredicted RBP25.28■■□□□ 1.64
NKD1-203ENST00000566396 SYNJ1O43426 1573 aa25.26■■□□□ 1.63
NKD1-203ENST00000566396 CHMP7Q8WUX9 453 aaPredicted RBP25.25■■□□□ 1.63
NKD1-203ENST00000566396 TDRD9Q8NDG6 1382 aaKnown RBP25.21■■□□□ 1.63
NKD1-203ENST00000566396 GRIN2BQ13224 1484 aa25.2■■□□□ 1.62
NKD1-203ENST00000566396 RAD54L2Q9Y4B4 1467 aa25.2■■□□□ 1.62
NKD1-203ENST00000566396 SNAPC4Q5SXM2 1469 aa25.19■■□□□ 1.62
NKD1-203ENST00000566396 FGD5Q6ZNL6 1462 aa25.17■■□□□ 1.62
NKD1-203ENST00000566396 CLASP1Q7Z460 1538 aa25.17■■□□□ 1.62
NKD1-203ENST00000566396 SYNJ2O15056 1496 aa25.15■■□□□ 1.62
NKD1-203ENST00000566396 CUX1P39880 1505 aa25.04■■□□□ 1.6
NKD1-203ENST00000566396 GAPVD1Q14C86 1478 aa25.02■■□□□ 1.6
NKD1-203ENST00000566396 AEBP2Q6ZN18 517 aaPredicted RBP24.99■■□□□ 1.59
NKD1-203ENST00000566396 ABCA10Q8WWZ4 1543 aa24.96■■□□□ 1.59
NKD1-203ENST00000566396 PBRM1Q86U86 1689 aa24.94■■□□□ 1.58
NKD1-203ENST00000566396 ABCA5Q8WWZ7 1642 aa24.86■■□□□ 1.57
NKD1-203ENST00000566396 WRNQ14191 1432 aaPredicted RBP eCLIP24.86■■□□□ 1.57
NKD1-203ENST00000566396 GRIN2AQ12879 1464 aa24.83■■□□□ 1.56
NKD1-203ENST00000566396 NUP160Q12769 1436 aa24.77■■□□□ 1.56
NKD1-203ENST00000566396 FHAD1B1AJZ9 1412 aa24.74■■□□□ 1.55
NKD1-203ENST00000566396 ADAMTS12P58397 1594 aa24.71■■□□□ 1.55
NKD1-203ENST00000566396 ERICH3Q5RHP9 1530 aa24.7■■□□□ 1.54
NKD1-203ENST00000566396 CEP170Q5SW79 1584 aa24.68■■□□□ 1.54
NKD1-203ENST00000566396 TOP2BQ02880 1626 aa24.65■■□□□ 1.54
NKD1-203ENST00000566396 SHROOM2Q13796 1616 aa24.65■■□□□ 1.54
NKD1-203ENST00000566396 BIVM-ERCC5R4GMW8 1640 aa24.64■■□□□ 1.53
NKD1-203ENST00000566396 NPM1P06748 294 aaKnown RBP eCLIP24.56■■□□□ 1.52
NKD1-203ENST00000566396 ERCC6L2Q5T890 1561 aa24.54■■□□□ 1.52
NKD1-203ENST00000566396 SUPT5HO00267 1087 aaKnown RBP24.53■■□□□ 1.52
NKD1-203ENST00000566396 JPH4Q96JJ6 628 aa24.53■■□□□ 1.52
NKD1-203ENST00000566396 PRG4Q92954 1404 aaPredicted RBP24.52■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms