RNA–Protein interactions for RNA: ENST00000492013.1

RTKN-210, Transcript of rhotekin, humanhuman

TSL 2

Gene RTKN, Length 853 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTKN-210ENST00000492013 NISCHQ9Y2I1 1504 aa28.61■■■□□ 2.17
RTKN-210ENST00000492013 CCDC180Q9P1Z9 1646 aa25.13■■□□□ 1.61
RTKN-210ENST00000492013 ZCCHC6Q5VYS8 1495 aaKnown RBP24.06■■□□□ 1.44
RTKN-210ENST00000492013 DCAF1Q9Y4B6 1507 aa23.74■■□□□ 1.39
RTKN-210ENST00000492013 ABCC9O60706 1549 aa23.54■■□□□ 1.36
RTKN-210ENST00000492013 MYO15BQ96JP2 1530 aa23.46■■□□□ 1.35
RTKN-210ENST00000492013 DCAF8L2P0C7V8 631 aa23.43■■□□□ 1.34
RTKN-210ENST00000492013 NACADO15069 1562 aa23.32■■□□□ 1.32
RTKN-210ENST00000492013 SHROOM4Q9ULL8 1493 aa23.17■■□□□ 1.3
RTKN-210ENST00000492013 RB1CC1Q8TDY2 1594 aa23.13■■□□□ 1.29
RTKN-210ENST00000492013 SCRIBQ14160 1630 aa22.97■■□□□ 1.27
RTKN-210ENST00000492013 UNC13AQ9UPW8 1703 aa22.74■■□□□ 1.23
RTKN-210ENST00000492013 BICRAQ9NZM4 1560 aa22.38■■□□□ 1.17
RTKN-210ENST00000492013 SUPT5HO00267 1087 aaKnown RBP22.27■■□□□ 1.16
RTKN-210ENST00000492013 CECR2Q9BXF3 1484 aa22.15■■□□□ 1.14
RTKN-210ENST00000492013 BAZ1AQ9NRL2 1556 aaPredicted RBP22.14■■□□□ 1.13
RTKN-210ENST00000492013 RSF1Q96T23 1441 aaPredicted RBP22.13■■□□□ 1.13
RTKN-210ENST00000492013 PABPN1Q86U42 306 aaKnown RBP eCLIP22.09■■□□□ 1.139e-7■□□□□ 8.3
RTKN-210ENST00000492013 MROH2BQ7Z745 1585 aa22.07■■□□□ 1.12
RTKN-210ENST00000492013 SMARCA4P51532 1647 aa22.06■■□□□ 1.12
RTKN-210ENST00000492013 WIZO95785 1651 aa21.94■■□□□ 1.1
RTKN-210ENST00000492013 PEG3Q9GZU2 1588 aa21.8■■□□□ 1.08
RTKN-210ENST00000492013 TOP2AP11388 1531 aaKnown RBP21.75■■□□□ 1.07
RTKN-210ENST00000492013 EIF4G1Q04637 1599 aaKnown RBP21.7■■□□□ 1.06
RTKN-210ENST00000492013 SMARCA2P51531 1590 aa21.69■■□□□ 1.06
RTKN-210ENST00000492013 ATAD2BQ9ULI0 1458 aa21.61■■□□□ 1.05
RTKN-210ENST00000492013 BAZ1BQ9UIG0 1483 aaKnown RBP21.52■■□□□ 1.04
RTKN-210ENST00000492013 HMGXB3Q12766 1538 aa21.5■■□□□ 1.03
RTKN-210ENST00000492013 NCAPD3P42695 1498 aa21.44■■□□□ 1.02
RTKN-210ENST00000492013 CCDC88BA6NC98 1476 aa21.43■■□□□ 1.02
RTKN-210ENST00000492013 CC2D2AQ9P2K1 1620 aa21.39■■□□□ 1.01
RTKN-210ENST00000492013 CHIC1Q5VXU3 224 aa21.34■■□□□ 1.01
RTKN-210ENST00000492013 PRDM2Q13029 1718 aa21.11■□□□□ 0.97
RTKN-210ENST00000492013 ABCC8Q09428 1581 aa20.99■□□□□ 0.95
RTKN-210ENST00000492013 TRIM41Q8WV44 630 aa20.98■□□□□ 0.95
RTKN-210ENST00000492013 CFTRP13569 1480 aa20.96■□□□□ 0.95
RTKN-210ENST00000492013 WRNQ14191 1432 aaPredicted RBP eCLIP20.86■□□□□ 0.93
RTKN-210ENST00000492013 CADPSQ9ULU8 1353 aa20.85■□□□□ 0.93
RTKN-210ENST00000492013 SYNJ1O43426 1573 aa20.81■□□□□ 0.92
RTKN-210ENST00000492013 BIVM-ERCC5R4GMW8 1640 aa20.81■□□□□ 0.92
RTKN-210ENST00000492013 LAMC3Q9Y6N6 1575 aa20.8■□□□□ 0.92
RTKN-210ENST00000492013 TOP2BQ02880 1626 aa20.77■□□□□ 0.92
RTKN-210ENST00000492013 FANCD2Q9BXW9 1451 aa20.66■□□□□ 0.9
RTKN-210ENST00000492013 CUX1P39880 1505 aa20.66■□□□□ 0.9
RTKN-210ENST00000492013 NESP48681 1621 aa20.66■□□□□ 0.9
RTKN-210ENST00000492013 EEA1Q15075 1411 aa20.62■□□□□ 0.89
RTKN-210ENST00000492013 DNAJC5BQ9UF47 199 aa20.62■□□□□ 0.89
RTKN-210ENST00000492013 KIF21AQ7Z4S6 1674 aa20.57■□□□□ 0.88
RTKN-210ENST00000492013 CEP164Q9UPV0 1460 aa20.56■□□□□ 0.88
RTKN-210ENST00000492013 PDS5BQ9NTI5 1447 aa20.55■□□□□ 0.88
RTKN-210ENST00000492013 DNMBPQ6XZF7 1577 aa20.55■□□□□ 0.88
RTKN-210ENST00000492013 FAM9AQ8IZU1 332 aaPredicted RBP20.53■□□□□ 0.88
RTKN-210ENST00000492013 SOGA1O94964 1423 aa20.53■□□□□ 0.88
RTKN-210ENST00000492013 TOPBP1Q92547 1522 aa20.45■□□□□ 0.86
RTKN-210ENST00000492013 LOC105371045A0A1W2PR82 267 aa20.45■□□□□ 0.86
RTKN-210ENST00000492013 RUSC2Q8N2Y8 1516 aa20.44■□□□□ 0.86
RTKN-210ENST00000492013 FGD5Q6ZNL6 1462 aa20.43■□□□□ 0.86
RTKN-210ENST00000492013 URB2Q14146 1524 aaKnown RBP20.4■□□□□ 0.86
RTKN-210ENST00000492013 KIF21BO75037 1637 aa20.39■□□□□ 0.86
RTKN-210ENST00000492013 CSRNP3Q8WYN3 585 aa20.37■□□□□ 0.85
RTKN-210ENST00000492013 KIF27Q86VH2 1401 aa20.35■□□□□ 0.85
RTKN-210ENST00000492013 POLA1P09884 1462 aaPredicted RBP20.33■□□□□ 0.85
RTKN-210ENST00000492013 WDR97A6NE52 1622 aa20.33■□□□□ 0.84
RTKN-210ENST00000492013 MRC2Q9UBG0 1479 aa20.32■□□□□ 0.84
RTKN-210ENST00000492013 GOLGA3Q08378 1498 aa20.31■□□□□ 0.84
RTKN-210ENST00000492013 CUX2O14529 1486 aa20.28■□□□□ 0.84
RTKN-210ENST00000492013 ABCA10Q8WWZ4 1543 aa20.27■□□□□ 0.84
RTKN-210ENST00000492013 ERICH3Q5RHP9 1530 aa20.25■□□□□ 0.83
RTKN-210ENST00000492013 WDR62O43379 1518 aa20.24■□□□□ 0.83
RTKN-210ENST00000492013 ERCC6Q03468 1493 aa20.24■□□□□ 0.83
RTKN-210ENST00000492013 THOC2Q8NI27 1593 aaKnown RBP20.21■□□□□ 0.83
RTKN-210ENST00000492013 RAD54L2Q9Y4B4 1467 aa20.21■□□□□ 0.83
RTKN-210ENST00000492013 TNIKQ9UKE5 1360 aa20.2■□□□□ 0.82
RTKN-210ENST00000492013 PRXQ9BXM0 1461 aa20.19■□□□□ 0.82
RTKN-210ENST00000492013 EHMT2Q96KQ7 1210 aa20.19■□□□□ 0.82
RTKN-210ENST00000492013 TARBP1Q13395 1621 aaKnown RBP20.19■□□□□ 0.82
RTKN-210ENST00000492013 ABCA5Q8WWZ7 1642 aa20.17■□□□□ 0.82
RTKN-210ENST00000492013 RAPGEF2Q9Y4G8 1499 aa20.15■□□□□ 0.82
RTKN-210ENST00000492013 CUL7Q14999 1698 aa20.14■□□□□ 0.81
RTKN-210ENST00000492013 UBTFP17480 764 aaKnown RBP20.09■□□□□ 0.81
RTKN-210ENST00000492013 PBRM1Q86U86 1689 aa20.09■□□□□ 0.81
RTKN-210ENST00000492013 CEP162Q5TB80 1403 aa20.09■□□□□ 0.81
RTKN-210ENST00000492013 IGF1RP08069 1367 aa20.08■□□□□ 0.81
RTKN-210ENST00000492013 IFT140Q96RY7 1462 aa20.07■□□□□ 0.8
RTKN-210ENST00000492013 GAPVD1Q14C86 1478 aa20.05■□□□□ 0.8
RTKN-210ENST00000492013 AEBP2Q6ZN18 517 aaPredicted RBP20.03■□□□□ 0.8
RTKN-210ENST00000492013 CARMIL1Q5VZK9 1371 aa20.02■□□□□ 0.8
RTKN-210ENST00000492013 TDRD9Q8NDG6 1382 aaKnown RBP19.98■□□□□ 0.79
RTKN-210ENST00000492013 CTTNBP2Q8WZ74 1663 aa19.96■□□□□ 0.79
RTKN-210ENST00000492013 EIF4G3O43432 1585 aaKnown RBP19.94■□□□□ 0.78
RTKN-210ENST00000492013 CLIP1P30622 1438 aa19.93■□□□□ 0.78
RTKN-210ENST00000492013 GRIN2BQ13224 1484 aa19.91■□□□□ 0.78
RTKN-210ENST00000492013 ADAMTS12P58397 1594 aa19.91■□□□□ 0.78
RTKN-210ENST00000492013 ZNF608Q9ULD9 1512 aaPredicted RBP19.88■□□□□ 0.77
RTKN-210ENST00000492013 AQRO60306 1485 aaKnown RBP eCLIP19.87■□□□□ 0.772e-6■■■□□ 17.8
RTKN-210ENST00000492013 FHAD1B1AJZ9 1412 aa19.84■□□□□ 0.77
RTKN-210ENST00000492013 VPS8Q8N3P4 1428 aa19.78■□□□□ 0.76
RTKN-210ENST00000492013 MAGI1Q96QZ7 1491 aaPredicted RBP19.78■□□□□ 0.76
RTKN-210ENST00000492013 SNAPC4Q5SXM2 1469 aa19.76■□□□□ 0.75
RTKN-210ENST00000492013 ARAP1Q96P48 1450 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms