RNA–Protein interactions for RNA: ENST00000590586.1

SEPT9-230, Transcript of septin 9, humanhuman

TSL 4

Gene SEPT9, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEPT9-230ENST00000590586 NISCHQ9Y2I1 1504 aa50■■■■■ 5.59
SEPT9-230ENST00000590586 CCDC180Q9P1Z9 1646 aa44.79■■■■■ 4.76
SEPT9-230ENST00000590586 ABCC9O60706 1549 aa44.04■■■■■ 4.64
SEPT9-230ENST00000590586 RB1CC1Q8TDY2 1594 aa42.33■■■■■ 4.37
SEPT9-230ENST00000590586 NACADO15069 1562 aa42.17■■■■■ 4.34
SEPT9-230ENST00000590586 DCAF8L2P0C7V8 631 aa41.91■■■■■ 4.3
SEPT9-230ENST00000590586 MYO15BQ96JP2 1530 aa41.78■■■■■ 4.28
SEPT9-230ENST00000590586 ZCCHC6Q5VYS8 1495 aaKnown RBP41.54■■■■■ 4.24
SEPT9-230ENST00000590586 DCAF1Q9Y4B6 1507 aa41.42■■■■■ 4.22
SEPT9-230ENST00000590586 UNC13AQ9UPW8 1703 aa41.4■■■■■ 4.22
SEPT9-230ENST00000590586 PABPN1Q86U42 306 aaKnown RBP eCLIP41.02■■■■■ 4.16
SEPT9-230ENST00000590586 BICRAQ9NZM4 1560 aa40.95■■■■■ 4.15
SEPT9-230ENST00000590586 DNAJC5BQ9UF47 199 aa40.7■■■■■ 4.11
SEPT9-230ENST00000590586 SCRIBQ14160 1630 aa40.68■■■■■ 4.1
SEPT9-230ENST00000590586 SHROOM4Q9ULL8 1493 aa40.63■■■■■ 4.09
SEPT9-230ENST00000590586 EIF4G1Q04637 1599 aaKnown RBP39.94■■■■□ 3.98
SEPT9-230ENST00000590586 CC2D2AQ9P2K1 1620 aa39.9■■■■□ 3.98
SEPT9-230ENST00000590586 CECR2Q9BXF3 1484 aa39.66■■■■□ 3.94
SEPT9-230ENST00000590586 SMARCA4P51532 1647 aa38.92■■■■□ 3.82
SEPT9-230ENST00000590586 BAZ1AQ9NRL2 1556 aaPredicted RBP38.84■■■■□ 3.81
SEPT9-230ENST00000590586 NCAPD3P42695 1498 aa38.84■■■■□ 3.81
SEPT9-230ENST00000590586 SMARCA2P51531 1590 aa38.8■■■■□ 3.8
SEPT9-230ENST00000590586 ATAD2BQ9ULI0 1458 aa38.77■■■■□ 3.8
SEPT9-230ENST00000590586 HMGXB3Q12766 1538 aa38.66■■■■□ 3.78
SEPT9-230ENST00000590586 PEG3Q9GZU2 1588 aa38.57■■■■□ 3.77
SEPT9-230ENST00000590586 MROH2BQ7Z745 1585 aa38.47■■■■□ 3.75
SEPT9-230ENST00000590586 BAZ1BQ9UIG0 1483 aaKnown RBP38.47■■■■□ 3.75
SEPT9-230ENST00000590586 WIZO95785 1651 aa38.09■■■■□ 3.69
SEPT9-230ENST00000590586 ERCC6Q03468 1493 aa38.08■■■■□ 3.69
SEPT9-230ENST00000590586 LAMC3Q9Y6N6 1575 aa37.97■■■■□ 3.67
SEPT9-230ENST00000590586 NESP48681 1621 aa37.95■■■■□ 3.67
SEPT9-230ENST00000590586 RSF1Q96T23 1441 aaPredicted RBP37.87■■■■□ 3.65
SEPT9-230ENST00000590586 CUX2O14529 1486 aa37.86■■■■□ 3.65
SEPT9-230ENST00000590586 PDS5BQ9NTI5 1447 aa37.7■■■■□ 3.62
SEPT9-230ENST00000590586 CADPSQ9ULU8 1353 aa37.68■■■■□ 3.62
SEPT9-230ENST00000590586 TOP2AP11388 1531 aaKnown RBP37.67■■■■□ 3.62
SEPT9-230ENST00000590586 KIF21AQ7Z4S6 1674 aa37.64■■■■□ 3.62
SEPT9-230ENST00000590586 THOC2Q8NI27 1593 aaKnown RBP37.57■■■■□ 3.6
SEPT9-230ENST00000590586 CFTRP13569 1480 aa37.36■■■■□ 3.57
SEPT9-230ENST00000590586 MRC2Q9UBG0 1479 aa37.29■■■■□ 3.56
SEPT9-230ENST00000590586 CEP164Q9UPV0 1460 aa37.27■■■■□ 3.56
SEPT9-230ENST00000590586 PRDM2Q13029 1718 aa37.26■■■■□ 3.56
SEPT9-230ENST00000590586 FANCD2Q9BXW9 1451 aa37.24■■■■□ 3.55
SEPT9-230ENST00000590586 WDR62O43379 1518 aa37.19■■■■□ 3.54
SEPT9-230ENST00000590586 CCDC88BA6NC98 1476 aa37.18■■■■□ 3.54
SEPT9-230ENST00000590586 DNAJC5Q9H3Z4 198 aa37.13■■■■□ 3.53
SEPT9-230ENST00000590586 URB2Q14146 1524 aaKnown RBP36.85■■■■□ 3.49
SEPT9-230ENST00000590586 ABCC8Q09428 1581 aa36.7■■■■□ 3.46
SEPT9-230ENST00000590586 TOPBP1Q92547 1522 aa36.59■■■■□ 3.45
SEPT9-230ENST00000590586 DNMBPQ6XZF7 1577 aa36.57■■■■□ 3.44
SEPT9-230ENST00000590586 SUPT5HO00267 1087 aaKnown RBP36.56■■■■□ 3.44
SEPT9-230ENST00000590586 IFT140Q96RY7 1462 aa36.51■■■■□ 3.44
SEPT9-230ENST00000590586 ZNF608Q9ULD9 1512 aaPredicted RBP36.28■■■■□ 3.4
SEPT9-230ENST00000590586 TARBP1Q13395 1621 aaKnown RBP36.26■■■■□ 3.39
SEPT9-230ENST00000590586 POLA1P09884 1462 aaPredicted RBP36.24■■■■□ 3.39
SEPT9-230ENST00000590586 EIF4G3O43432 1585 aaKnown RBP36.22■■■■□ 3.39
SEPT9-230ENST00000590586 OSCARQ8IYS5 282 aa36.19■■■■□ 3.38
SEPT9-230ENST00000590586 CUX1P39880 1505 aa36.13■■■■□ 3.37
SEPT9-230ENST00000590586 SOGA1O94964 1423 aa36.1■■■■□ 3.37
SEPT9-230ENST00000590586 FGD5Q6ZNL6 1462 aa36.1■■■■□ 3.37
SEPT9-230ENST00000590586 WDR97A6NE52 1622 aa36.08■■■■□ 3.37
SEPT9-230ENST00000590586 AQRO60306 1485 aaKnown RBP eCLIP36.04■■■■□ 3.36
SEPT9-230ENST00000590586 RAD54L2Q9Y4B4 1467 aa36.04■■■■□ 3.36
SEPT9-230ENST00000590586 CHD1O14646 1710 aa35.91■■■■□ 3.34
SEPT9-230ENST00000590586 TDRD9Q8NDG6 1382 aaKnown RBP35.89■■■■□ 3.34
SEPT9-230ENST00000590586 BIVM-ERCC5R4GMW8 1640 aa35.82■■■■□ 3.32
SEPT9-230ENST00000590586 TOP2BQ02880 1626 aa35.79■■■■□ 3.32
SEPT9-230ENST00000590586 WRNQ14191 1432 aaPredicted RBP eCLIP35.76■■■■□ 3.32
SEPT9-230ENST00000590586 GRIN2BQ13224 1484 aa35.76■■■■□ 3.32
SEPT9-230ENST00000590586 ABCA10Q8WWZ4 1543 aa35.76■■■■□ 3.31
SEPT9-230ENST00000590586 PBRM1Q86U86 1689 aa35.75■■■■□ 3.31
SEPT9-230ENST00000590586 MAGI1Q96QZ7 1491 aaPredicted RBP35.73■■■■□ 3.31
SEPT9-230ENST00000590586 FBLN2P98095 1184 aa35.73■■■■□ 3.31
SEPT9-230ENST00000590586 SNAPC4Q5SXM2 1469 aa35.72■■■■□ 3.31
SEPT9-230ENST00000590586 GAPVD1Q14C86 1478 aa35.7■■■■□ 3.31
SEPT9-230ENST00000590586 TRIM41Q8WV44 630 aa35.68■■■■□ 3.3
SEPT9-230ENST00000590586 SYNJ1O43426 1573 aa35.68■■■■□ 3.3
SEPT9-230ENST00000590586 ABCA5Q8WWZ7 1642 aa35.67■■■■□ 3.3
SEPT9-230ENST00000590586 RIMBP3CA6NJZ7 1639 aa35.65■■■■□ 3.3
SEPT9-230ENST00000590586 RIMBP3BA6NNM3 1639 aa35.65■■■■□ 3.3
SEPT9-230ENST00000590586 RIMBP3Q9UFD9 1639 aa35.65■■■■□ 3.3
SEPT9-230ENST00000590586 CHMP7Q8WUX9 453 aaPredicted RBP35.6■■■■□ 3.29
SEPT9-230ENST00000590586 SYNJ2O15056 1496 aa35.58■■■■□ 3.29
SEPT9-230ENST00000590586 ARHGEF11O15085 1522 aa35.57■■■■□ 3.29
SEPT9-230ENST00000590586 CLASP1Q7Z460 1538 aa35.42■■■■□ 3.26
SEPT9-230ENST00000590586 ERICH3Q5RHP9 1530 aa35.37■■■■□ 3.25
SEPT9-230ENST00000590586 ADAMTS12P58397 1594 aa35.34■■■■□ 3.25
SEPT9-230ENST00000590586 GRIN2AQ12879 1464 aa35.29■■■■□ 3.24
SEPT9-230ENST00000590586 FHAD1B1AJZ9 1412 aa35.27■■■■□ 3.24
SEPT9-230ENST00000590586 CYB5RLQ6IPT4 315 aa35.24■■■■□ 3.23
SEPT9-230ENST00000590586 ARAP1Q96P48 1450 aa35.21■■■■□ 3.23
SEPT9-230ENST00000590586 NUP160Q12769 1436 aa35.13■■■■□ 3.21
SEPT9-230ENST00000590586 CEP170Q5SW79 1584 aa35.1■■■■□ 3.21
SEPT9-230ENST00000590586 KIF27Q86VH2 1401 aa35.09■■■■□ 3.21
SEPT9-230ENST00000590586 CUL7Q14999 1698 aa35.01■■■■□ 3.2
SEPT9-230ENST00000590586 SHROOM2Q13796 1616 aa34.98■■■■□ 3.19
SEPT9-230ENST00000590586 IGF1RP08069 1367 aa34.92■■■■□ 3.18
SEPT9-230ENST00000590586 RUSC2Q8N2Y8 1516 aa34.83■■■■□ 3.17
SEPT9-230ENST00000590586 ERCC6L2Q5T890 1561 aa34.82■■■■□ 3.16
SEPT9-230ENST00000590586 JPH4Q96JJ6 628 aa34.77■■■■□ 3.16
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms