RNA–Protein interactions for RNA: ENST00000535222.5

CPSF7-214, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 940 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-214ENST00000535222 NISCHQ9Y2I1 1504 aa20.16■□□□□ 0.82
CPSF7-214ENST00000535222 ABCC9O60706 1549 aa19.32■□□□□ 0.68
CPSF7-214ENST00000535222 DNAJC5BQ9UF47 199 aa19.14■□□□□ 0.65
CPSF7-214ENST00000535222 CCDC180Q9P1Z9 1646 aa18.45■□□□□ 0.54
CPSF7-214ENST00000535222 DNAJC5Q9H3Z4 198 aa18.31■□□□□ 0.52
CPSF7-214ENST00000535222 RB1CC1Q8TDY2 1594 aa18.03■□□□□ 0.48
CPSF7-214ENST00000535222 PABPN1Q86U42 306 aaKnown RBP eCLIP17.87■□□□□ 0.45
CPSF7-214ENST00000535222 NACADO15069 1562 aa17.73■□□□□ 0.43
CPSF7-214ENST00000535222 BICRAQ9NZM4 1560 aa17.59■□□□□ 0.41
CPSF7-214ENST00000535222 CECR2Q9BXF3 1484 aa17.57■□□□□ 0.4
CPSF7-214ENST00000535222 UNC13AQ9UPW8 1703 aa17.55■□□□□ 0.4
CPSF7-214ENST00000535222 CC2D2AQ9P2K1 1620 aa17.44■□□□□ 0.38
CPSF7-214ENST00000535222 SHROOM4Q9ULL8 1493 aa17.34■□□□□ 0.37
CPSF7-214ENST00000535222 MYO15BQ96JP2 1530 aa17.3■□□□□ 0.36
CPSF7-214ENST00000535222 DCAF8L2P0C7V8 631 aa17.25■□□□□ 0.35
CPSF7-214ENST00000535222 EIF4G1Q04637 1599 aaKnown RBP17.2■□□□□ 0.34
CPSF7-214ENST00000535222 CUX2O14529 1486 aa17.17■□□□□ 0.34
CPSF7-214ENST00000535222 TRIM41Q8WV44 630 aa16.88■□□□□ 0.29
CPSF7-214ENST00000535222 ERCC6Q03468 1493 aa16.73■□□□□ 0.27
CPSF7-214ENST00000535222 SCRIBQ14160 1630 aa16.7■□□□□ 0.26
CPSF7-214ENST00000535222 DCAF1Q9Y4B6 1507 aa16.68■□□□□ 0.26
CPSF7-214ENST00000535222 ZCCHC6Q5VYS8 1495 aaKnown RBP16.48■□□□□ 0.23
CPSF7-214ENST00000535222 NCAPD3P42695 1498 aa16.45■□□□□ 0.22
CPSF7-214ENST00000535222 THOC2Q8NI27 1593 aaKnown RBP16.39■□□□□ 0.21
CPSF7-214ENST00000535222 NESP48681 1621 aa16.35■□□□□ 0.21
CPSF7-214ENST00000535222 OSCARQ8IYS5 282 aa16.23■□□□□ 0.19
CPSF7-214ENST00000535222 ATAD2BQ9ULI0 1458 aa16.19■□□□□ 0.18
CPSF7-214ENST00000535222 HMGXB3Q12766 1538 aa16.16■□□□□ 0.18
CPSF7-214ENST00000535222 LAMC3Q9Y6N6 1575 aa16.13■□□□□ 0.17
CPSF7-214ENST00000535222 AEBP2Q6ZN18 517 aaPredicted RBP16.13■□□□□ 0.17
CPSF7-214ENST00000535222 PDS5BQ9NTI5 1447 aa16.1■□□□□ 0.17
CPSF7-214ENST00000535222 SMARCA2P51531 1590 aa16.09■□□□□ 0.17
CPSF7-214ENST00000535222 BAZ1AQ9NRL2 1556 aaPredicted RBP16.09■□□□□ 0.17
CPSF7-214ENST00000535222 KIF21AQ7Z4S6 1674 aa16.04■□□□□ 0.16
CPSF7-214ENST00000535222 RIMBP3CA6NJZ7 1639 aa16.02■□□□□ 0.16
CPSF7-214ENST00000535222 RIMBP3BA6NNM3 1639 aa16.02■□□□□ 0.16
CPSF7-214ENST00000535222 RIMBP3Q9UFD9 1639 aa16.02■□□□□ 0.16
CPSF7-214ENST00000535222 WDR62O43379 1518 aa15.99■□□□□ 0.15
CPSF7-214ENST00000535222 MRC2Q9UBG0 1479 aa15.97■□□□□ 0.15
CPSF7-214ENST00000535222 BAZ1BQ9UIG0 1483 aaKnown RBP15.91■□□□□ 0.14
CPSF7-214ENST00000535222 ARHGEF11O15085 1522 aa15.9■□□□□ 0.14
CPSF7-214ENST00000535222 TRHP20396 242 aaPredicted RBP15.89■□□□□ 0.13
CPSF7-214ENST00000535222 CADPSQ9ULU8 1353 aa15.87■□□□□ 0.13
CPSF7-214ENST00000535222 SMARCA4P51532 1647 aa15.86■□□□□ 0.13
CPSF7-214ENST00000535222 PEG3Q9GZU2 1588 aa15.83■□□□□ 0.13
CPSF7-214ENST00000535222 CYB5RLQ6IPT4 315 aa15.83■□□□□ 0.12
CPSF7-214ENST00000535222 ILDR1Q86SU0 546 aaPredicted RBP15.71■□□□□ 0.11
CPSF7-214ENST00000535222 ARAP1Q96P48 1450 aa15.69■□□□□ 0.1
CPSF7-214ENST00000535222 CEP164Q9UPV0 1460 aa15.68■□□□□ 0.1
CPSF7-214ENST00000535222 FANCD2Q9BXW9 1451 aa15.6■□□□□ 0.09
CPSF7-214ENST00000535222 RSF1Q96T23 1441 aaPredicted RBP15.58■□□□□ 0.08
CPSF7-214ENST00000535222 URB2Q14146 1524 aaKnown RBP15.55■□□□□ 0.08
CPSF7-214ENST00000535222 ZNF608Q9ULD9 1512 aaPredicted RBP15.51■□□□□ 0.07
CPSF7-214ENST00000535222 CFTRP13569 1480 aa15.49■□□□□ 0.07
CPSF7-214ENST00000535222 MROH2BQ7Z745 1585 aa15.48■□□□□ 0.07
CPSF7-214ENST00000535222 IFT140Q96RY7 1462 aa15.47■□□□□ 0.07
CPSF7-214ENST00000535222 CHD1O14646 1710 aa15.34■□□□□ 0.05
CPSF7-214ENST00000535222 EIF4G3O43432 1585 aaKnown RBP15.31■□□□□ 0.04
CPSF7-214ENST00000535222 CLASP1Q7Z460 1538 aa15.27■□□□□ 0.03
CPSF7-214ENST00000535222 KDM4FA0A1W2PPD8 638 aa15.26■□□□□ 0.03
CPSF7-214ENST00000535222 AQRO60306 1485 aaKnown RBP eCLIP15.25■□□□□ 0.033e-7■■■■■ 40.5
CPSF7-214ENST00000535222 FBLN2P98095 1184 aa15.24■□□□□ 0.03
CPSF7-214ENST00000535222 TOPBP1Q92547 1522 aa15.21■□□□□ 0.03
CPSF7-214ENST00000535222 WIZO95785 1651 aa15.18■□□□□ 0.02
CPSF7-214ENST00000535222 ABCC8Q09428 1581 aa15.17■□□□□ 0.02
CPSF7-214ENST00000535222 TARBP1Q13395 1621 aaKnown RBP15.16■□□□□ 0.02
CPSF7-214ENST00000535222 GAPVD1Q14C86 1478 aa15.15■□□□□ 0.02
CPSF7-214ENST00000535222 SYNJ1O43426 1573 aa15.11■□□□□ 0.01
CPSF7-214ENST00000535222 PRDM2Q13029 1718 aa15.09■□□□□ 0.01
CPSF7-214ENST00000535222 CHMP7Q8WUX9 453 aaPredicted RBP15.06■□□□□ 0
CPSF7-214ENST00000535222 DNMBPQ6XZF7 1577 aa15.06■□□□□ 0
CPSF7-214ENST00000535222 FBXO41Q8TF61 875 aa15.03■□□□□ -0
CPSF7-214ENST00000535222 KIF13AQ9H1H9 1805 aa15.03■□□□□ -0
CPSF7-214ENST00000535222 SNAPC4Q5SXM2 1469 aa15.02■□□□□ -0
CPSF7-214ENST00000535222 MAGI1Q96QZ7 1491 aaPredicted RBP15.01□□□□□ -0.01
CPSF7-214ENST00000535222 POLA1P09884 1462 aaPredicted RBP15.01□□□□□ -0.01
CPSF7-214ENST00000535222 ERCC6L2Q5T890 1561 aa15□□□□□ -0.01
CPSF7-214ENST00000535222 TDRD9Q8NDG6 1382 aaKnown RBP14.99□□□□□ -0.01
CPSF7-214ENST00000535222 WDR97A6NE52 1622 aa14.99□□□□□ -0.01
CPSF7-214ENST00000535222 TOP2AP11388 1531 aaKnown RBP14.97□□□□□ -0.01
CPSF7-214ENST00000535222 SYNJ2O15056 1496 aa14.97□□□□□ -0.01
CPSF7-214ENST00000535222 RAD54L2Q9Y4B4 1467 aa14.93□□□□□ -0.02
CPSF7-214ENST00000535222 SOGA1O94964 1423 aa14.92□□□□□ -0.02
CPSF7-214ENST00000535222 ABCC10Q5T3U5 1492 aa14.91□□□□□ -0.02
CPSF7-214ENST00000535222 HECW2Q9P2P5 1572 aa14.9□□□□□ -0.02
CPSF7-214ENST00000535222 GRIN2BQ13224 1484 aa14.89□□□□□ -0.03
CPSF7-214ENST00000535222 FAM69CQ0P6D2 419 aa14.89□□□□□ -0.03
CPSF7-214ENST00000535222 KDM6BO15054 1643 aa14.84□□□□□ -0.03
CPSF7-214ENST00000535222 CCDC88BA6NC98 1476 aa14.84□□□□□ -0.03
CPSF7-214ENST00000535222 LMTK3Q96Q04 1460 aa14.83□□□□□ -0.03
CPSF7-214ENST00000535222 SOCS7O14512 581 aa14.83□□□□□ -0.04
CPSF7-214ENST00000535222 ADGRL1O94910 1474 aa14.81□□□□□ -0.04
CPSF7-214ENST00000535222 CEP170Q5SW79 1584 aa14.8□□□□□ -0.04
CPSF7-214ENST00000535222 MAPKBP1O60336 1514 aa14.79□□□□□ -0.04
CPSF7-214ENST00000535222 DIP2BQ9P265 1576 aa14.77□□□□□ -0.05
CPSF7-214ENST00000535222 SHROOM2Q13796 1616 aa14.76□□□□□ -0.05
CPSF7-214ENST00000535222 NUP160Q12769 1436 aa14.75□□□□□ -0.05
CPSF7-214ENST00000535222 FGD5Q6ZNL6 1462 aa14.73□□□□□ -0.05
CPSF7-214ENST00000535222 ILDR2Q71H61 639 aa14.71□□□□□ -0.05
CPSF7-214ENST00000535222 GRIN2AQ12879 1464 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms