RNA–Protein interactions for RNA: ENST00000367214.5

ZC3H11A-204, Transcript of zinc finger CCCH-type containing 11A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene ZC3H11A, Length 3,451 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H11A-204ENST00000367214 NISCHQ9Y2I1 1504 aa13.45□□□□□ -0.26
ZC3H11A-204ENST00000367214 SHROOM4Q9ULL8 1493 aa11.75□□□□□ -0.53
ZC3H11A-204ENST00000367214 DCAF8L2P0C7V8 631 aa11.58□□□□□ -0.56
ZC3H11A-204ENST00000367214 SUPT5HO00267 1087 aaKnown RBP11.53□□□□□ -0.56
ZC3H11A-204ENST00000367214 ZCCHC6Q5VYS8 1495 aaKnown RBP11.34□□□□□ -0.59
ZC3H11A-204ENST00000367214 CCDC180Q9P1Z9 1646 aa11.33□□□□□ -0.6
ZC3H11A-204ENST00000367214 CHIC1Q5VXU3 224 aa11.02□□□□□ -0.65
ZC3H11A-204ENST00000367214 MYO15BQ96JP2 1530 aa10.92□□□□□ -0.66
ZC3H11A-204ENST00000367214 DCAF1Q9Y4B6 1507 aa10.91□□□□□ -0.66
ZC3H11A-204ENST00000367214 SCRIBQ14160 1630 aa10.83□□□□□ -0.68
ZC3H11A-204ENST00000367214 ABCC9O60706 1549 aa10.82□□□□□ -0.68
ZC3H11A-204ENST00000367214 LOC105371045A0A1W2PR82 267 aa10.8□□□□□ -0.68
ZC3H11A-204ENST00000367214 PCGF6Q9BYE7 350 aa10.79□□□□□ -0.68
ZC3H11A-204ENST00000367214 EHMT2Q96KQ7 1210 aa10.72□□□□□ -0.69
ZC3H11A-204ENST00000367214 FAM9AQ8IZU1 332 aaPredicted RBP10.7□□□□□ -0.7
ZC3H11A-204ENST00000367214 RSF1Q96T23 1441 aaPredicted RBP10.68□□□□□ -0.7
ZC3H11A-204ENST00000367214 TRIM41Q8WV44 630 aa10.67□□□□□ -0.7
ZC3H11A-204ENST00000367214 HRCP23327 699 aa10.63□□□□□ -0.71
ZC3H11A-204ENST00000367214 CECR2Q9BXF3 1484 aa10.58□□□□□ -0.72
ZC3H11A-204ENST00000367214 RB1CC1Q8TDY2 1594 aa10.57□□□□□ -0.72
ZC3H11A-204ENST00000367214 NACADO15069 1562 aa10.56□□□□□ -0.72
ZC3H11A-204ENST00000367214 PPARGC1BQ86YN6 1023 aaKnown RBP10.53□□□□□ -0.72
ZC3H11A-204ENST00000367214 MROH2BQ7Z745 1585 aa10.5□□□□□ -0.73
ZC3H11A-204ENST00000367214 TRIM26Q12899 539 aaPredicted RBP10.48□□□□□ -0.73
ZC3H11A-204ENST00000367214 WIZO95785 1651 aa10.44□□□□□ -0.74
ZC3H11A-204ENST00000367214 PABPN1Q86U42 306 aaKnown RBP eCLIP10.42□□□□□ -0.741e-7■■□□□ 12.5
ZC3H11A-204ENST00000367214 TTBK1Q5TCY1 1321 aaPredicted RBP10.34□□□□□ -0.75
ZC3H11A-204ENST00000367214 BAZ1AQ9NRL2 1556 aaPredicted RBP10.34□□□□□ -0.75
ZC3H11A-204ENST00000367214 ABCC8Q09428 1581 aa10.26□□□□□ -0.77
ZC3H11A-204ENST00000367214 SMARCA4P51532 1647 aa10.24□□□□□ -0.77
ZC3H11A-204ENST00000367214 CCDC88BA6NC98 1476 aa10.24□□□□□ -0.77
ZC3H11A-204ENST00000367214 UBTFP17480 764 aaKnown RBP10.23□□□□□ -0.77
ZC3H11A-204ENST00000367214 TOP2AP11388 1531 aaKnown RBP10.22□□□□□ -0.77
ZC3H11A-204ENST00000367214 UNC13AQ9UPW8 1703 aa10.21□□□□□ -0.78
ZC3H11A-204ENST00000367214 ZEB1P37275 1124 aaPredicted RBP10.2□□□□□ -0.78
ZC3H11A-204ENST00000367214 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.17□□□□□ -0.78
ZC3H11A-204ENST00000367214 SMARCA2P51531 1590 aa10.17□□□□□ -0.78
ZC3H11A-204ENST00000367214 SOGA1O94964 1423 aa10.17□□□□□ -0.78
ZC3H11A-204ENST00000367214 RANGAP1P46060 587 aaPredicted RBP10.17□□□□□ -0.78
ZC3H11A-204ENST00000367214 CCER1Q8TC90 406 aaPredicted RBP10.16□□□□□ -0.78
ZC3H11A-204ENST00000367214 CSRNP3Q8WYN3 585 aa10.14□□□□□ -0.79
ZC3H11A-204ENST00000367214 EIF4G1Q04637 1599 aaKnown RBP10.13□□□□□ -0.79
ZC3H11A-204ENST00000367214 BICRAQ9NZM4 1560 aa10.11□□□□□ -0.79
ZC3H11A-204ENST00000367214 RUSC2Q8N2Y8 1516 aa10.1□□□□□ -0.79
ZC3H11A-204ENST00000367214 CEP162Q5TB80 1403 aa10.1□□□□□ -0.79
ZC3H11A-204ENST00000367214 WRNQ14191 1432 aaPredicted RBP eCLIP10.08□□□□□ -0.8
ZC3H11A-204ENST00000367214 BAZ1BQ9UIG0 1483 aaKnown RBP10.05□□□□□ -0.8
ZC3H11A-204ENST00000367214 TNIKQ9UKE5 1360 aa10.03□□□□□ -0.8
ZC3H11A-204ENST00000367214 ATAD2BQ9ULI0 1458 aa10.03□□□□□ -0.8
ZC3H11A-204ENST00000367214 EEA1Q15075 1411 aa10.01□□□□□ -0.81
ZC3H11A-204ENST00000367214 APLP2Q06481 763 aa10□□□□□ -0.81
ZC3H11A-204ENST00000367214 GOLGA3Q08378 1498 aa10□□□□□ -0.81
ZC3H11A-204ENST00000367214 HNRNPUL2Q1KMD3 747 aaKnown RBP9.99□□□□□ -0.81
ZC3H11A-204ENST00000367214 SYNJ1O43426 1573 aa9.97□□□□□ -0.81
ZC3H11A-204ENST00000367214 PEG3Q9GZU2 1588 aa9.95□□□□□ -0.82
ZC3H11A-204ENST00000367214 CLIP1P30622 1438 aa9.94□□□□□ -0.82
ZC3H11A-204ENST00000367214 CEP164Q9UPV0 1460 aa9.94□□□□□ -0.82
ZC3H11A-204ENST00000367214 PELP1Q8IZL8 1130 aaKnown RBP9.91□□□□□ -0.82
ZC3H11A-204ENST00000367214 RAPGEF2Q9Y4G8 1499 aa9.9□□□□□ -0.82
ZC3H11A-204ENST00000367214 DIEXFQ68CQ4 756 aaKnown RBP9.88□□□□□ -0.83
ZC3H11A-204ENST00000367214 VPS8Q8N3P4 1428 aa9.84□□□□□ -0.83
ZC3H11A-204ENST00000367214 KIF21BO75037 1637 aa9.83□□□□□ -0.84
ZC3H11A-204ENST00000367214 TOP2BQ02880 1626 aa9.81□□□□□ -0.84
ZC3H11A-204ENST00000367214 ITGAEP38570 1179 aa9.8□□□□□ -0.84
ZC3H11A-204ENST00000367214 SCAF1Q9H7N4 1312 aaKnown RBP9.8□□□□□ -0.84
ZC3H11A-204ENST00000367214 NCAPD3P42695 1498 aa9.8□□□□□ -0.84
ZC3H11A-204ENST00000367214 YTHDC1Q96MU7 727 aaKnown RBP9.78□□□□□ -0.84
ZC3H11A-204ENST00000367214 ATP1B4Q9UN42 357 aaPredicted RBP9.78□□□□□ -0.84
ZC3H11A-204ENST00000367214 KIF27Q86VH2 1401 aa9.78□□□□□ -0.84
ZC3H11A-204ENST00000367214 ZNF316A6NFI3 1004 aaPredicted RBP9.77□□□□□ -0.85
ZC3H11A-204ENST00000367214 KANK4Q5T7N3 995 aaPredicted RBP9.76□□□□□ -0.85
ZC3H11A-204ENST00000367214 CUX1P39880 1505 aa9.76□□□□□ -0.85
ZC3H11A-204ENST00000367214 HMGXB3Q12766 1538 aa9.75□□□□□ -0.85
ZC3H11A-204ENST00000367214 NEUROD1Q13562 356 aa9.74□□□□□ -0.85
ZC3H11A-204ENST00000367214 P3H3Q8IVL6 736 aa9.73□□□□□ -0.85
ZC3H11A-204ENST00000367214 CENPBP07199 599 aaPredicted RBP9.73□□□□□ -0.85
ZC3H11A-204ENST00000367214 CFTRP13569 1480 aa9.73□□□□□ -0.85
ZC3H11A-204ENST00000367214 BIVM-ERCC5R4GMW8 1640 aa9.72□□□□□ -0.85
ZC3H11A-204ENST00000367214 CUX2O14529 1486 aa9.72□□□□□ -0.85
ZC3H11A-204ENST00000367214 PRXQ9BXM0 1461 aa9.72□□□□□ -0.85
ZC3H11A-204ENST00000367214 ACIN1Q9UKV3 1341 aaKnown RBP9.71□□□□□ -0.85
ZC3H11A-204ENST00000367214 MYT1Q01538 1121 aa9.7□□□□□ -0.86
ZC3H11A-204ENST00000367214 ARAP1Q96P48 1450 aa9.7□□□□□ -0.86
ZC3H11A-204ENST00000367214 CADPSQ9ULU8 1353 aa9.69□□□□□ -0.86
ZC3H11A-204ENST00000367214 ERICH3Q5RHP9 1530 aa9.68□□□□□ -0.86
ZC3H11A-204ENST00000367214 GTF3C3Q9Y5Q9 886 aa9.67□□□□□ -0.86
ZC3H11A-204ENST00000367214 MIER1Q8N108 512 aa9.66□□□□□ -0.86
ZC3H11A-204ENST00000367214 CARMIL1Q5VZK9 1371 aa9.65□□□□□ -0.86
ZC3H11A-204ENST00000367214 IGF1RP08069 1367 aa9.65□□□□□ -0.86
ZC3H11A-204ENST00000367214 FAM50AQ14320 339 aaKnown RBP9.65□□□□□ -0.87
ZC3H11A-204ENST00000367214 FGD5Q6ZNL6 1462 aa9.64□□□□□ -0.87
ZC3H11A-204ENST00000367214 ARHGAP35Q9NRY4 1499 aa9.64□□□□□ -0.87
ZC3H11A-204ENST00000367214 CC2D2AQ9P2K1 1620 aa9.62□□□□□ -0.87
ZC3H11A-204ENST00000367214 CCNB3Q8WWL7 1395 aa9.61□□□□□ -0.87
ZC3H11A-204ENST00000367214 FANCD2Q9BXW9 1451 aa9.6□□□□□ -0.87
ZC3H11A-204ENST00000367214 DHX57Q6P158 1386 aaKnown RBP9.6□□□□□ -0.87
ZC3H11A-204ENST00000367214 NESP48681 1621 aa9.59□□□□□ -0.87
ZC3H11A-204ENST00000367214 RAD54L2Q9Y4B4 1467 aa9.59□□□□□ -0.87
ZC3H11A-204ENST00000367214 FHOD3Q2V2M9 1422 aa9.55□□□□□ -0.88
ZC3H11A-204ENST00000367214 RRBP1Q9P2E9 1410 aaKnown RBP9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms