RNA–Protein interactions for RNA: ENST00000534769.5

CFL1-214, Transcript of cofilin 1, humanhuman

TSL 2 BASIC

Gene CFL1, Length 758 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Lamellipodium, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFL1-214ENST00000534769 NISCHQ9Y2I1 1504 aa35.78■■■■□ 3.32
CFL1-214ENST00000534769 ABCC9O60706 1549 aa32.31■■■□□ 2.76
CFL1-214ENST00000534769 CCDC180Q9P1Z9 1646 aa32.22■■■□□ 2.75
CFL1-214ENST00000534769 RB1CC1Q8TDY2 1594 aa30.66■■■□□ 2.5
CFL1-214ENST00000534769 NACADO15069 1562 aa30.4■■■□□ 2.46
CFL1-214ENST00000534769 DNAJC5BQ9UF47 199 aa30.37■■■□□ 2.45
CFL1-214ENST00000534769 UNC13AQ9UPW8 1703 aa30.16■■■□□ 2.42
CFL1-214ENST00000534769 DCAF8L2P0C7V8 631 aa30.12■■■□□ 2.41
CFL1-214ENST00000534769 PABPN1Q86U42 306 aaKnown RBP eCLIP29.99■■■□□ 2.39
CFL1-214ENST00000534769 MYO15BQ96JP2 1530 aa29.91■■■□□ 2.38
CFL1-214ENST00000534769 BICRAQ9NZM4 1560 aa29.87■■■□□ 2.37
CFL1-214ENST00000534769 ZCCHC6Q5VYS8 1495 aaKnown RBP29.68■■■□□ 2.34
CFL1-214ENST00000534769 DCAF1Q9Y4B6 1507 aa29.51■■■□□ 2.32
CFL1-214ENST00000534769 SCRIBQ14160 1630 aa29.39■■■□□ 2.3
CFL1-214ENST00000534769 SHROOM4Q9ULL8 1493 aa29.32■■■□□ 2.28
CFL1-214ENST00000534769 CC2D2AQ9P2K1 1620 aa29.21■■■□□ 2.27
CFL1-214ENST00000534769 EIF4G1Q04637 1599 aaKnown RBP29.1■■■□□ 2.25
CFL1-214ENST00000534769 CECR2Q9BXF3 1484 aa29.08■■■□□ 2.25
CFL1-214ENST00000534769 NCAPD3P42695 1498 aa28.03■■■□□ 2.08
CFL1-214ENST00000534769 SMARCA4P51532 1647 aa28■■■□□ 2.07
CFL1-214ENST00000534769 ATAD2BQ9ULI0 1458 aa27.99■■■□□ 2.07
CFL1-214ENST00000534769 HMGXB3Q12766 1538 aa27.9■■■□□ 2.06
CFL1-214ENST00000534769 SMARCA2P51531 1590 aa27.89■■■□□ 2.05
CFL1-214ENST00000534769 DNAJC5Q9H3Z4 198 aa27.88■■■□□ 2.05
CFL1-214ENST00000534769 ERCC6Q03468 1493 aa27.85■■■□□ 2.05
CFL1-214ENST00000534769 CUX2O14529 1486 aa27.84■■■□□ 2.05
CFL1-214ENST00000534769 BAZ1AQ9NRL2 1556 aaPredicted RBP27.77■■■□□ 2.04
CFL1-214ENST00000534769 NESP48681 1621 aa27.76■■■□□ 2.03
CFL1-214ENST00000534769 BAZ1BQ9UIG0 1483 aaKnown RBP27.71■■■□□ 2.03
CFL1-214ENST00000534769 PEG3Q9GZU2 1588 aa27.69■■■□□ 2.02
CFL1-214ENST00000534769 MROH2BQ7Z745 1585 aa27.61■■■□□ 2.01
CFL1-214ENST00000534769 THOC2Q8NI27 1593 aaKnown RBP27.55■■■□□ 2
CFL1-214ENST00000534769 LAMC3Q9Y6N6 1575 aa27.48■■□□□ 1.99
CFL1-214ENST00000534769 KIF21AQ7Z4S6 1674 aa27.46■■□□□ 1.99
CFL1-214ENST00000534769 WIZO95785 1651 aa27.32■■□□□ 1.96
CFL1-214ENST00000534769 PDS5BQ9NTI5 1447 aa27.24■■□□□ 1.95
CFL1-214ENST00000534769 CADPSQ9ULU8 1353 aa27.16■■□□□ 1.94
CFL1-214ENST00000534769 MRC2Q9UBG0 1479 aa27.1■■□□□ 1.93
CFL1-214ENST00000534769 WDR62O43379 1518 aa27.07■■□□□ 1.92
CFL1-214ENST00000534769 CEP164Q9UPV0 1460 aa26.97■■□□□ 1.91
CFL1-214ENST00000534769 RSF1Q96T23 1441 aaPredicted RBP26.94■■□□□ 1.9
CFL1-214ENST00000534769 FANCD2Q9BXW9 1451 aa26.93■■□□□ 1.9
CFL1-214ENST00000534769 TOP2AP11388 1531 aaKnown RBP26.91■■□□□ 1.9
CFL1-214ENST00000534769 CFTRP13569 1480 aa26.87■■□□□ 1.89
CFL1-214ENST00000534769 URB2Q14146 1524 aaKnown RBP26.76■■□□□ 1.87
CFL1-214ENST00000534769 PRDM2Q13029 1718 aa26.76■■□□□ 1.87
CFL1-214ENST00000534769 TRIM41Q8WV44 630 aa26.66■■□□□ 1.86
CFL1-214ENST00000534769 CCDC88BA6NC98 1476 aa26.57■■□□□ 1.84
CFL1-214ENST00000534769 ZNF608Q9ULD9 1512 aaPredicted RBP26.45■■□□□ 1.83
CFL1-214ENST00000534769 OSCARQ8IYS5 282 aa26.43■■□□□ 1.82
CFL1-214ENST00000534769 TOPBP1Q92547 1522 aa26.42■■□□□ 1.82
CFL1-214ENST00000534769 IFT140Q96RY7 1462 aa26.4■■□□□ 1.82
CFL1-214ENST00000534769 EIF4G3O43432 1585 aaKnown RBP26.34■■□□□ 1.81
CFL1-214ENST00000534769 DNMBPQ6XZF7 1577 aa26.33■■□□□ 1.8
CFL1-214ENST00000534769 RIMBP3CA6NJZ7 1639 aa26.32■■□□□ 1.8
CFL1-214ENST00000534769 RIMBP3BA6NNM3 1639 aa26.32■■□□□ 1.8
CFL1-214ENST00000534769 RIMBP3Q9UFD9 1639 aa26.32■■□□□ 1.8
CFL1-214ENST00000534769 TARBP1Q13395 1621 aaKnown RBP26.25■■□□□ 1.79
CFL1-214ENST00000534769 ABCC8Q09428 1581 aa26.24■■□□□ 1.79
CFL1-214ENST00000534769 CHD1O14646 1710 aa26.2■■□□□ 1.79
CFL1-214ENST00000534769 ARHGEF11O15085 1522 aa26.18■■□□□ 1.78
CFL1-214ENST00000534769 POLA1P09884 1462 aaPredicted RBP26.15■■□□□ 1.78
CFL1-214ENST00000534769 AQRO60306 1485 aaKnown RBP eCLIP26.14■■□□□ 1.782e-7■■■□□ 16.1
CFL1-214ENST00000534769 RAD54L2Q9Y4B4 1467 aa26.06■■□□□ 1.76
CFL1-214ENST00000534769 FGD5Q6ZNL6 1462 aa25.98■■□□□ 1.75
CFL1-214ENST00000534769 CUX1P39880 1505 aa25.96■■□□□ 1.75
CFL1-214ENST00000534769 ARAP1Q96P48 1450 aa25.94■■□□□ 1.74
CFL1-214ENST00000534769 SOGA1O94964 1423 aa25.94■■□□□ 1.74
CFL1-214ENST00000534769 TDRD9Q8NDG6 1382 aaKnown RBP25.94■■□□□ 1.74
CFL1-214ENST00000534769 SNAPC4Q5SXM2 1469 aa25.91■■□□□ 1.74
CFL1-214ENST00000534769 FBLN2P98095 1184 aa25.91■■□□□ 1.74
CFL1-214ENST00000534769 WDR97A6NE52 1622 aa25.9■■□□□ 1.74
CFL1-214ENST00000534769 CYB5RLQ6IPT4 315 aa25.87■■□□□ 1.73
CFL1-214ENST00000534769 CLASP1Q7Z460 1538 aa25.83■■□□□ 1.73
CFL1-214ENST00000534769 PBRM1Q86U86 1689 aa25.8■■□□□ 1.72
CFL1-214ENST00000534769 MAGI1Q96QZ7 1491 aaPredicted RBP25.78■■□□□ 1.72
CFL1-214ENST00000534769 GRIN2BQ13224 1484 aa25.76■■□□□ 1.71
CFL1-214ENST00000534769 SYNJ1O43426 1573 aa25.76■■□□□ 1.71
CFL1-214ENST00000534769 SYNJ2O15056 1496 aa25.7■■□□□ 1.7
CFL1-214ENST00000534769 ABCA5Q8WWZ7 1642 aa25.7■■□□□ 1.7
CFL1-214ENST00000534769 CHMP7Q8WUX9 453 aaPredicted RBP25.67■■□□□ 1.7
CFL1-214ENST00000534769 GAPVD1Q14C86 1478 aa25.66■■□□□ 1.7
CFL1-214ENST00000534769 ABCA10Q8WWZ4 1543 aa25.64■■□□□ 1.7
CFL1-214ENST00000534769 TRHP20396 242 aaPredicted RBP25.6■■□□□ 1.69
CFL1-214ENST00000534769 SUPT5HO00267 1087 aaKnown RBP25.59■■□□□ 1.69
CFL1-214ENST00000534769 BIVM-ERCC5R4GMW8 1640 aa25.53■■□□□ 1.68
CFL1-214ENST00000534769 ADAMTS12P58397 1594 aa25.52■■□□□ 1.68
CFL1-214ENST00000534769 TOP2BQ02880 1626 aa25.49■■□□□ 1.67
CFL1-214ENST00000534769 ERCC6L2Q5T890 1561 aa25.48■■□□□ 1.67
CFL1-214ENST00000534769 GRIN2AQ12879 1464 aa25.47■■□□□ 1.67
CFL1-214ENST00000534769 CEP170Q5SW79 1584 aa25.45■■□□□ 1.66
CFL1-214ENST00000534769 WRNQ14191 1432 aaPredicted RBP eCLIP25.45■■□□□ 1.66
CFL1-214ENST00000534769 NUP160Q12769 1436 aa25.38■■□□□ 1.65
CFL1-214ENST00000534769 SHROOM2Q13796 1616 aa25.34■■□□□ 1.65
CFL1-214ENST00000534769 FHAD1B1AJZ9 1412 aa25.31■■□□□ 1.64
CFL1-214ENST00000534769 ERICH3Q5RHP9 1530 aa25.31■■□□□ 1.64
CFL1-214ENST00000534769 RUSC2Q8N2Y8 1516 aa25.17■■□□□ 1.62
CFL1-214ENST00000534769 KIF13AQ9H1H9 1805 aa25.12■■□□□ 1.61
CFL1-214ENST00000534769 PRG4Q92954 1404 aaPredicted RBP25.12■■□□□ 1.61
CFL1-214ENST00000534769 JPH4Q96JJ6 628 aa25■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms