Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
GAFA1Q96PS6 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
GAFA1Q96PS6 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC21.68■■□□□ 1.06
GAFA1Q96PS6 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
GAFA1Q96PS6 ABCB10P3-201ENST00000561950 2166 ntBASIC21.68■■□□□ 1.06
GAFA1Q96PS6 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC21.66■■□□□ 1.06
GAFA1Q96PS6 EI24-212ENST00000615917 1407 ntTSL 2 BASIC21.66■■□□□ 1.06
GAFA1Q96PS6 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
GAFA1Q96PS6 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
GAFA1Q96PS6 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
GAFA1Q96PS6 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC21.64■■□□□ 1.06
GAFA1Q96PS6 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
GAFA1Q96PS6 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
GAFA1Q96PS6 AL139393.2-201ENST00000608721 2025 ntBASIC21.63■■□□□ 1.05
GAFA1Q96PS6 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
GAFA1Q96PS6 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
GAFA1Q96PS6 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
GAFA1Q96PS6 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
GAFA1Q96PS6 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
GAFA1Q96PS6 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
GAFA1Q96PS6 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
GAFA1Q96PS6 DUX4L29-201ENST00000425409 679 ntBASIC21.6■■□□□ 1.05
GAFA1Q96PS6 AC021231.2-201ENST00000594613 730 ntBASIC21.6■■□□□ 1.05
GAFA1Q96PS6 AC139426.1-201ENST00000568218 2529 ntBASIC21.59■■□□□ 1.05
GAFA1Q96PS6 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
GAFA1Q96PS6 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
GAFA1Q96PS6 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
GAFA1Q96PS6 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
GAFA1Q96PS6 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
GAFA1Q96PS6 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
GAFA1Q96PS6 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
GAFA1Q96PS6 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
GAFA1Q96PS6 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
GAFA1Q96PS6 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC21.57■■□□□ 1.04
GAFA1Q96PS6 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
GAFA1Q96PS6 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC21.57■■□□□ 1.04
GAFA1Q96PS6 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC21.57■■□□□ 1.04
GAFA1Q96PS6 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC21.56■■□□□ 1.04
GAFA1Q96PS6 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
GAFA1Q96PS6 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
GAFA1Q96PS6 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
GAFA1Q96PS6 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC21.56■■□□□ 1.04
GAFA1Q96PS6 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
GAFA1Q96PS6 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC21.55■■□□□ 1.04
GAFA1Q96PS6 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC21.55■■□□□ 1.04
GAFA1Q96PS6 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
GAFA1Q96PS6 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC21.55■■□□□ 1.04
GAFA1Q96PS6 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC21.55■■□□□ 1.04
GAFA1Q96PS6 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC21.55■■□□□ 1.04
GAFA1Q96PS6 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC21.55■■□□□ 1.04
GAFA1Q96PS6 LINC00273-201ENST00000539813 1452 ntBASIC21.55■■□□□ 1.04
GAFA1Q96PS6 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
GAFA1Q96PS6 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
GAFA1Q96PS6 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC21.54■■□□□ 1.04
GAFA1Q96PS6 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
GAFA1Q96PS6 HGH1-207ENST00000628266 258 ntTSL 5 BASIC21.54■■□□□ 1.04
GAFA1Q96PS6 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
GAFA1Q96PS6 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
GAFA1Q96PS6 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC21.53■■□□□ 1.04
GAFA1Q96PS6 AP004833.2-201ENST00000532228 1454 ntBASIC21.53■■□□□ 1.04
GAFA1Q96PS6 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
GAFA1Q96PS6 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
GAFA1Q96PS6 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC21.53■■□□□ 1.04
GAFA1Q96PS6 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC21.53■■□□□ 1.04
GAFA1Q96PS6 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
GAFA1Q96PS6 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
GAFA1Q96PS6 MLEC-202ENST00000412616 841 ntTSL 3 BASIC21.52■■□□□ 1.04
GAFA1Q96PS6 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC21.52■■□□□ 1.04
GAFA1Q96PS6 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC21.52■■□□□ 1.04
GAFA1Q96PS6 CALM3-209ENST00000597743 577 ntTSL 4 BASIC21.52■■□□□ 1.04
GAFA1Q96PS6 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
GAFA1Q96PS6 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
GAFA1Q96PS6 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
GAFA1Q96PS6 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
GAFA1Q96PS6 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
GAFA1Q96PS6 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
GAFA1Q96PS6 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
GAFA1Q96PS6 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
GAFA1Q96PS6 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
GAFA1Q96PS6 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
GAFA1Q96PS6 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC21.5■■□□□ 1.03
GAFA1Q96PS6 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
GAFA1Q96PS6 AC135983.2-203ENST00000454486 1613 ntBASIC21.5■■□□□ 1.03
GAFA1Q96PS6 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC21.5■■□□□ 1.03
GAFA1Q96PS6 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
GAFA1Q96PS6 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
GAFA1Q96PS6 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC21.48■■□□□ 1.03
GAFA1Q96PS6 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
GAFA1Q96PS6 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC21.48■■□□□ 1.03
GAFA1Q96PS6 WHAMMP2-203ENST00000563942 1603 ntBASIC21.47■■□□□ 1.03
GAFA1Q96PS6 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC21.47■■□□□ 1.03
GAFA1Q96PS6 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC21.47■■□□□ 1.03
GAFA1Q96PS6 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
GAFA1Q96PS6 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
GAFA1Q96PS6 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC21.47■■□□□ 1.03
GAFA1Q96PS6 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
GAFA1Q96PS6 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
GAFA1Q96PS6 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
GAFA1Q96PS6 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC21.46■■□□□ 1.03
GAFA1Q96PS6 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 8.3 ms