Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
SIX5Q8N196 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
SIX5Q8N196 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC26.89■■□□□ 1.9
SIX5Q8N196 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC26.89■■□□□ 1.9
SIX5Q8N196 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
SIX5Q8N196 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC26.87■■□□□ 1.89
SIX5Q8N196 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
SIX5Q8N196 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
SIX5Q8N196 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
SIX5Q8N196 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC26.85■■□□□ 1.89
SIX5Q8N196 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
SIX5Q8N196 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC26.83■■□□□ 1.89
SIX5Q8N196 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC26.83■■□□□ 1.89
SIX5Q8N196 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
SIX5Q8N196 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
SIX5Q8N196 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC26.82■■□□□ 1.88
SIX5Q8N196 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
SIX5Q8N196 LINC00273-201ENST00000539813 1452 ntBASIC26.81■■□□□ 1.88
SIX5Q8N196 HES4-202ENST00000428771 1040 ntTSL 2 BASIC26.81■■□□□ 1.88
SIX5Q8N196 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
SIX5Q8N196 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
SIX5Q8N196 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC26.8■■□□□ 1.88
SIX5Q8N196 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
SIX5Q8N196 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC26.79■■□□□ 1.88
SIX5Q8N196 AL033527.3-201ENST00000566366 1196 ntBASIC26.79■■□□□ 1.88
SIX5Q8N196 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
SIX5Q8N196 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
SIX5Q8N196 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC26.78■■□□□ 1.88
SIX5Q8N196 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC26.77■■□□□ 1.88
SIX5Q8N196 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC26.77■■□□□ 1.88
SIX5Q8N196 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
SIX5Q8N196 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
SIX5Q8N196 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC26.77■■□□□ 1.88
SIX5Q8N196 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
SIX5Q8N196 AC008813.1-201ENST00000536597 885 ntBASIC26.77■■□□□ 1.88
SIX5Q8N196 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC26.77■■□□□ 1.88
SIX5Q8N196 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC26.77■■□□□ 1.88
SIX5Q8N196 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC26.77■■□□□ 1.88
SIX5Q8N196 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
SIX5Q8N196 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC26.76■■□□□ 1.87
SIX5Q8N196 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC26.76■■□□□ 1.87
SIX5Q8N196 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
SIX5Q8N196 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
SIX5Q8N196 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
SIX5Q8N196 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC26.75■■□□□ 1.87
SIX5Q8N196 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
SIX5Q8N196 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC26.75■■□□□ 1.87
SIX5Q8N196 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
SIX5Q8N196 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
SIX5Q8N196 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
SIX5Q8N196 AC018358.1-201ENST00000631079 1402 ntBASIC26.73■■□□□ 1.87
SIX5Q8N196 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
SIX5Q8N196 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC26.73■■□□□ 1.87
SIX5Q8N196 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC26.73■■□□□ 1.87
SIX5Q8N196 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
SIX5Q8N196 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC26.72■■□□□ 1.87
SIX5Q8N196 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC26.71■■□□□ 1.87
SIX5Q8N196 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC26.71■■□□□ 1.87
SIX5Q8N196 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
SIX5Q8N196 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC26.7■■□□□ 1.86
SIX5Q8N196 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC26.69■■□□□ 1.86
SIX5Q8N196 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
SIX5Q8N196 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
SIX5Q8N196 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC26.69■■□□□ 1.86
SIX5Q8N196 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
SIX5Q8N196 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC26.68■■□□□ 1.86
SIX5Q8N196 AC120057.4-201ENST00000624722 1615 ntBASIC26.68■■□□□ 1.86
SIX5Q8N196 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
SIX5Q8N196 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
SIX5Q8N196 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC26.66■■□□□ 1.86
SIX5Q8N196 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC26.66■■□□□ 1.86
SIX5Q8N196 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
SIX5Q8N196 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
SIX5Q8N196 U85056.1-201ENST00000616429 682 ntBASIC26.65■■□□□ 1.86
SIX5Q8N196 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
SIX5Q8N196 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC26.64■■□□□ 1.85
SIX5Q8N196 HYI-213ENST00000583037 1322 ntTSL 5 BASIC26.64■■□□□ 1.85
SIX5Q8N196 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC26.63■■□□□ 1.85
SIX5Q8N196 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC26.63■■□□□ 1.85
SIX5Q8N196 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC26.62■■□□□ 1.85
SIX5Q8N196 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
SIX5Q8N196 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
SIX5Q8N196 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
SIX5Q8N196 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC26.6■■□□□ 1.85
SIX5Q8N196 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC26.6■■□□□ 1.85
SIX5Q8N196 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC26.6■■□□□ 1.85
SIX5Q8N196 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC26.59■■□□□ 1.85
SIX5Q8N196 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
SIX5Q8N196 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
SIX5Q8N196 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
SIX5Q8N196 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC26.58■■□□□ 1.85
SIX5Q8N196 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
SIX5Q8N196 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
SIX5Q8N196 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC26.56■■□□□ 1.84
SIX5Q8N196 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC26.55■■□□□ 1.84
SIX5Q8N196 GFER-205ENST00000569451 517 ntTSL 5 BASIC26.55■■□□□ 1.84
SIX5Q8N196 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC26.55■■□□□ 1.84
SIX5Q8N196 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC26.54■■□□□ 1.84
SIX5Q8N196 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC26.54■■□□□ 1.84
SIX5Q8N196 TSPY13P-201ENST00000338964 914 ntBASIC26.54■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms