RNA–Protein interactions for RNA: ENST00000397298.7

MRPL23-205, Transcript of mitochondrial ribosomal protein L23, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL23, Length 736 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL23-205ENST00000397298 NISCHQ9Y2I1 1504 aa60.38■■■■■ 7.26
MRPL23-205ENST00000397298 ABCC9O60706 1549 aa54.41■■■■■ 6.3
MRPL23-205ENST00000397298 CCDC180Q9P1Z9 1646 aa54.15■■■■■ 6.26
MRPL23-205ENST00000397298 RB1CC1Q8TDY2 1594 aa51.73■■■■■ 5.87
MRPL23-205ENST00000397298 NACADO15069 1562 aa51.36■■■■■ 5.81
MRPL23-205ENST00000397298 DNAJC5BQ9UF47 199 aa51.26■■■■■ 5.8
MRPL23-205ENST00000397298 DCAF8L2P0C7V8 631 aa51.22■■■■■ 5.79
MRPL23-205ENST00000397298 PABPN1Q86U42 306 aaKnown RBP eCLIP50.72■■■■■ 5.71
MRPL23-205ENST00000397298 MYO15BQ96JP2 1530 aa50.63■■■■■ 5.7
MRPL23-205ENST00000397298 UNC13AQ9UPW8 1703 aa50.31■■■■■ 5.64
MRPL23-205ENST00000397298 BICRAQ9NZM4 1560 aa50.13■■■■■ 5.62
MRPL23-205ENST00000397298 ZCCHC6Q5VYS8 1495 aaKnown RBP49.95■■■■■ 5.59
MRPL23-205ENST00000397298 DCAF1Q9Y4B6 1507 aa49.89■■■■■ 5.58
MRPL23-205ENST00000397298 SHROOM4Q9ULL8 1493 aa49.59■■■■■ 5.53
MRPL23-205ENST00000397298 SCRIBQ14160 1630 aa49.31■■■■■ 5.48
MRPL23-205ENST00000397298 CC2D2AQ9P2K1 1620 aa49.09■■■■■ 5.45
MRPL23-205ENST00000397298 CECR2Q9BXF3 1484 aa49.07■■■■■ 5.45
MRPL23-205ENST00000397298 EIF4G1Q04637 1599 aaKnown RBP48.97■■■■■ 5.43
MRPL23-205ENST00000397298 NCAPD3P42695 1498 aa47.47■■■■■ 5.19
MRPL23-205ENST00000397298 DNAJC5Q9H3Z4 198 aa47.31■■■■■ 5.16
MRPL23-205ENST00000397298 ATAD2BQ9ULI0 1458 aa47.25■■■■■ 5.15
MRPL23-205ENST00000397298 SMARCA2P51531 1590 aa47.11■■■■■ 5.13
MRPL23-205ENST00000397298 SMARCA4P51532 1647 aa47.05■■■■■ 5.12
MRPL23-205ENST00000397298 ERCC6Q03468 1493 aa47.05■■■■■ 5.12
MRPL23-205ENST00000397298 CUX2O14529 1486 aa47.02■■■■■ 5.12
MRPL23-205ENST00000397298 HMGXB3Q12766 1538 aa47■■■■■ 5.12
MRPL23-205ENST00000397298 BAZ1AQ9NRL2 1556 aaPredicted RBP46.88■■■■■ 5.1
MRPL23-205ENST00000397298 BAZ1BQ9UIG0 1483 aaKnown RBP46.78■■■■■ 5.08
MRPL23-205ENST00000397298 NESP48681 1621 aa46.65■■■■■ 5.06
MRPL23-205ENST00000397298 PEG3Q9GZU2 1588 aa46.64■■■■■ 5.06
MRPL23-205ENST00000397298 MROH2BQ7Z745 1585 aa46.47■■■■■ 5.03
MRPL23-205ENST00000397298 LAMC3Q9Y6N6 1575 aa46.35■■■■■ 5.01
MRPL23-205ENST00000397298 PDS5BQ9NTI5 1447 aa46.21■■■■■ 4.99
MRPL23-205ENST00000397298 THOC2Q8NI27 1593 aaKnown RBP46.13■■■■■ 4.98
MRPL23-205ENST00000397298 CADPSQ9ULU8 1353 aa46.05■■■■■ 4.96
MRPL23-205ENST00000397298 KIF21AQ7Z4S6 1674 aa45.92■■■■■ 4.94
MRPL23-205ENST00000397298 WIZO95785 1651 aa45.84■■■■■ 4.93
MRPL23-205ENST00000397298 MRC2Q9UBG0 1479 aa45.72■■■■■ 4.91
MRPL23-205ENST00000397298 WDR62O43379 1518 aa45.56■■■■■ 4.88
MRPL23-205ENST00000397298 RSF1Q96T23 1441 aaPredicted RBP45.52■■■■■ 4.88
MRPL23-205ENST00000397298 CEP164Q9UPV0 1460 aa45.5■■■■■ 4.87
MRPL23-205ENST00000397298 FANCD2Q9BXW9 1451 aa45.45■■■■■ 4.87
MRPL23-205ENST00000397298 CFTRP13569 1480 aa45.43■■■■■ 4.86
MRPL23-205ENST00000397298 TOP2AP11388 1531 aaKnown RBP45.31■■■■■ 4.84
MRPL23-205ENST00000397298 TRIM41Q8WV44 630 aa45.11■■■■■ 4.81
MRPL23-205ENST00000397298 URB2Q14146 1524 aaKnown RBP45.03■■■■■ 4.8
MRPL23-205ENST00000397298 OSCARQ8IYS5 282 aa45■■■■■ 4.79
MRPL23-205ENST00000397298 CCDC88BA6NC98 1476 aa44.87■■■■■ 4.77
MRPL23-205ENST00000397298 PRDM2Q13029 1718 aa44.71■■■■■ 4.75
MRPL23-205ENST00000397298 IFT140Q96RY7 1462 aa44.64■■■■■ 4.74
MRPL23-205ENST00000397298 ABCC8Q09428 1581 aa44.56■■■■■ 4.72
MRPL23-205ENST00000397298 TOPBP1Q92547 1522 aa44.54■■■■■ 4.72
MRPL23-205ENST00000397298 ZNF608Q9ULD9 1512 aaPredicted RBP44.5■■■■■ 4.71
MRPL23-205ENST00000397298 DNMBPQ6XZF7 1577 aa44.33■■■■■ 4.69
MRPL23-205ENST00000397298 EIF4G3O43432 1585 aaKnown RBP44.18■■■■■ 4.66
MRPL23-205ENST00000397298 RIMBP3CA6NJZ7 1639 aa44.15■■■■■ 4.66
MRPL23-205ENST00000397298 RIMBP3BA6NNM3 1639 aa44.15■■■■■ 4.66
MRPL23-205ENST00000397298 RIMBP3Q9UFD9 1639 aa44.15■■■■■ 4.66
MRPL23-205ENST00000397298 AQRO60306 1485 aaKnown RBP eCLIP44.15■■■■■ 4.66
MRPL23-205ENST00000397298 TARBP1Q13395 1621 aaKnown RBP44.1■■■■■ 4.65
MRPL23-205ENST00000397298 POLA1P09884 1462 aaPredicted RBP44.07■■■■■ 4.65
MRPL23-205ENST00000397298 ARHGEF11O15085 1522 aa44.06■■■■■ 4.64
MRPL23-205ENST00000397298 FBLN2P98095 1184 aa44■■■■■ 4.63
MRPL23-205ENST00000397298 SOGA1O94964 1423 aa43.98■■■■■ 4.63
MRPL23-205ENST00000397298 CYB5RLQ6IPT4 315 aa43.92■■■■■ 4.62
MRPL23-205ENST00000397298 RAD54L2Q9Y4B4 1467 aa43.91■■■■■ 4.62
MRPL23-205ENST00000397298 TDRD9Q8NDG6 1382 aaKnown RBP43.88■■■■■ 4.61
MRPL23-205ENST00000397298 CHD1O14646 1710 aa43.82■■■■■ 4.6
MRPL23-205ENST00000397298 FGD5Q6ZNL6 1462 aa43.76■■■■■ 4.6
MRPL23-205ENST00000397298 WDR97A6NE52 1622 aa43.7■■■■■ 4.59
MRPL23-205ENST00000397298 CHMP7Q8WUX9 453 aaPredicted RBP43.68■■■■■ 4.58
MRPL23-205ENST00000397298 CUX1P39880 1505 aa43.67■■■■■ 4.58
MRPL23-205ENST00000397298 SNAPC4Q5SXM2 1469 aa43.64■■■■■ 4.58
MRPL23-205ENST00000397298 ARAP1Q96P48 1450 aa43.6■■■■■ 4.57
MRPL23-205ENST00000397298 GRIN2BQ13224 1484 aa43.57■■■■■ 4.57
MRPL23-205ENST00000397298 MAGI1Q96QZ7 1491 aaPredicted RBP43.57■■■■■ 4.57
MRPL23-205ENST00000397298 TRHP20396 242 aaPredicted RBP43.5■■■■■ 4.55
MRPL23-205ENST00000397298 SUPT5HO00267 1087 aaKnown RBP43.46■■■■■ 4.55
MRPL23-205ENST00000397298 SYNJ2O15056 1496 aa43.44■■■■■ 4.54
MRPL23-205ENST00000397298 SYNJ1O43426 1573 aa43.42■■■■■ 4.54
MRPL23-205ENST00000397298 CLASP1Q7Z460 1538 aa43.42■■■■■ 4.54
MRPL23-205ENST00000397298 GAPVD1Q14C86 1478 aa43.38■■■■■ 4.54
MRPL23-205ENST00000397298 ABCA10Q8WWZ4 1543 aa43.29■■■■■ 4.52
MRPL23-205ENST00000397298 WRNQ14191 1432 aaPredicted RBP eCLIP43.17■■■■■ 4.5
MRPL23-205ENST00000397298 PBRM1Q86U86 1689 aa43.17■■■■■ 4.5
MRPL23-205ENST00000397298 ABCA5Q8WWZ7 1642 aa43.13■■■■■ 4.49
MRPL23-205ENST00000397298 GRIN2AQ12879 1464 aa42.96■■■■■ 4.47
MRPL23-205ENST00000397298 TOP2BQ02880 1626 aa42.93■■■■■ 4.46
MRPL23-205ENST00000397298 BIVM-ERCC5R4GMW8 1640 aa42.87■■■■■ 4.45
MRPL23-205ENST00000397298 FHAD1B1AJZ9 1412 aa42.86■■■■■ 4.45
MRPL23-205ENST00000397298 NUP160Q12769 1436 aa42.84■■■■■ 4.45
MRPL23-205ENST00000397298 ADAMTS12P58397 1594 aa42.82■■■■■ 4.45
MRPL23-205ENST00000397298 ERICH3Q5RHP9 1530 aa42.75■■■■■ 4.43
MRPL23-205ENST00000397298 CEP170Q5SW79 1584 aa42.73■■■■■ 4.43
MRPL23-205ENST00000397298 ERCC6L2Q5T890 1561 aa42.69■■■■■ 4.42
MRPL23-205ENST00000397298 SHROOM2Q13796 1616 aa42.57■■■■■ 4.41
MRPL23-205ENST00000397298 JPH4Q96JJ6 628 aa42.55■■■■■ 4.4
MRPL23-205ENST00000397298 PRG4Q92954 1404 aaPredicted RBP42.49■■■■■ 4.39
MRPL23-205ENST00000397298 AEBP2Q6ZN18 517 aaPredicted RBP42.4■■■■■ 4.38
MRPL23-205ENST00000397298 NPM1P06748 294 aaKnown RBP eCLIP42.25■■■■■ 4.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms