Protein–RNA interactions for Protein: A0A0J9YXQ4

PNMA6E, Paraneoplastic antigen Ma6E, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNMA6EA0A0J9YXQ4 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
PNMA6EA0A0J9YXQ4 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC32.45■■■□□ 2.79
PNMA6EA0A0J9YXQ4 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC32.45■■■□□ 2.79
PNMA6EA0A0J9YXQ4 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC32.45■■■□□ 2.79
PNMA6EA0A0J9YXQ4 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.78
PNMA6EA0A0J9YXQ4 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
PNMA6EA0A0J9YXQ4 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC32.44■■■□□ 2.78
PNMA6EA0A0J9YXQ4 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
PNMA6EA0A0J9YXQ4 AC139426.1-201ENST00000568218 2529 ntBASIC32.43■■■□□ 2.78
PNMA6EA0A0J9YXQ4 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC32.43■■■□□ 2.78
PNMA6EA0A0J9YXQ4 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC32.43■■■□□ 2.78
PNMA6EA0A0J9YXQ4 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC32.43■■■□□ 2.78
PNMA6EA0A0J9YXQ4 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC32.43■■■□□ 2.78
PNMA6EA0A0J9YXQ4 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC32.42■■■□□ 2.78
PNMA6EA0A0J9YXQ4 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC32.42■■■□□ 2.78
PNMA6EA0A0J9YXQ4 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
PNMA6EA0A0J9YXQ4 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
PNMA6EA0A0J9YXQ4 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC32.41■■■□□ 2.78
PNMA6EA0A0J9YXQ4 HGH1-207ENST00000628266 258 ntTSL 5 BASIC32.41■■■□□ 2.78
PNMA6EA0A0J9YXQ4 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC32.4■■■□□ 2.78
PNMA6EA0A0J9YXQ4 DUX4L29-201ENST00000425409 679 ntBASIC32.39■■■□□ 2.78
PNMA6EA0A0J9YXQ4 ABCB10P3-201ENST00000561950 2166 ntBASIC32.39■■■□□ 2.78
PNMA6EA0A0J9YXQ4 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC32.38■■■□□ 2.77
PNMA6EA0A0J9YXQ4 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC32.38■■■□□ 2.77
PNMA6EA0A0J9YXQ4 EI24-212ENST00000615917 1407 ntTSL 2 BASIC32.38■■■□□ 2.77
PNMA6EA0A0J9YXQ4 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC32.38■■■□□ 2.77
PNMA6EA0A0J9YXQ4 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC32.38■■■□□ 2.77
PNMA6EA0A0J9YXQ4 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
PNMA6EA0A0J9YXQ4 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC32.37■■■□□ 2.77
PNMA6EA0A0J9YXQ4 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
PNMA6EA0A0J9YXQ4 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC32.36■■■□□ 2.77
PNMA6EA0A0J9YXQ4 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC32.36■■■□□ 2.77
PNMA6EA0A0J9YXQ4 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC32.36■■■□□ 2.77
PNMA6EA0A0J9YXQ4 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC32.36■■■□□ 2.77
PNMA6EA0A0J9YXQ4 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC32.36■■■□□ 2.77
PNMA6EA0A0J9YXQ4 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC32.36■■■□□ 2.77
PNMA6EA0A0J9YXQ4 AL139393.2-201ENST00000608721 2025 ntBASIC32.35■■■□□ 2.77
PNMA6EA0A0J9YXQ4 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
PNMA6EA0A0J9YXQ4 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
PNMA6EA0A0J9YXQ4 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
PNMA6EA0A0J9YXQ4 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
PNMA6EA0A0J9YXQ4 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC32.34■■■□□ 2.77
PNMA6EA0A0J9YXQ4 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
PNMA6EA0A0J9YXQ4 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC32.33■■■□□ 2.77
PNMA6EA0A0J9YXQ4 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC32.33■■■□□ 2.77
PNMA6EA0A0J9YXQ4 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC32.33■■■□□ 2.77
PNMA6EA0A0J9YXQ4 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
PNMA6EA0A0J9YXQ4 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC32.32■■■□□ 2.76
PNMA6EA0A0J9YXQ4 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
PNMA6EA0A0J9YXQ4 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC32.31■■■□□ 2.76
PNMA6EA0A0J9YXQ4 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC32.31■■■□□ 2.76
PNMA6EA0A0J9YXQ4 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
PNMA6EA0A0J9YXQ4 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC32.3■■■□□ 2.76
PNMA6EA0A0J9YXQ4 MLEC-202ENST00000412616 841 ntTSL 3 BASIC32.3■■■□□ 2.76
PNMA6EA0A0J9YXQ4 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC32.29■■■□□ 2.76
PNMA6EA0A0J9YXQ4 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
PNMA6EA0A0J9YXQ4 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC32.29■■■□□ 2.76
PNMA6EA0A0J9YXQ4 ABHD17AP4-201ENST00000411545 909 ntBASIC32.29■■■□□ 2.76
PNMA6EA0A0J9YXQ4 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC32.29■■■□□ 2.76
PNMA6EA0A0J9YXQ4 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
PNMA6EA0A0J9YXQ4 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC32.26■■■□□ 2.75
PNMA6EA0A0J9YXQ4 LINC00273-201ENST00000539813 1452 ntBASIC32.26■■■□□ 2.75
PNMA6EA0A0J9YXQ4 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
PNMA6EA0A0J9YXQ4 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC32.25■■■□□ 2.75
PNMA6EA0A0J9YXQ4 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC32.25■■■□□ 2.75
PNMA6EA0A0J9YXQ4 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC32.24■■■□□ 2.75
PNMA6EA0A0J9YXQ4 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC32.24■■■□□ 2.75
PNMA6EA0A0J9YXQ4 CALM3-209ENST00000597743 577 ntTSL 4 BASIC32.24■■■□□ 2.75
PNMA6EA0A0J9YXQ4 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC32.24■■■□□ 2.75
PNMA6EA0A0J9YXQ4 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC32.23■■■□□ 2.75
PNMA6EA0A0J9YXQ4 ZNRF2P2-203ENST00000454624 420 ntBASIC32.22■■■□□ 2.75
PNMA6EA0A0J9YXQ4 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC32.22■■■□□ 2.75
PNMA6EA0A0J9YXQ4 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC32.22■■■□□ 2.75
PNMA6EA0A0J9YXQ4 AC135983.2-203ENST00000454486 1613 ntBASIC32.22■■■□□ 2.75
PNMA6EA0A0J9YXQ4 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC32.21■■■□□ 2.75
PNMA6EA0A0J9YXQ4 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC32.2■■■□□ 2.74
PNMA6EA0A0J9YXQ4 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC32.2■■■□□ 2.74
PNMA6EA0A0J9YXQ4 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC32.2■■■□□ 2.74
PNMA6EA0A0J9YXQ4 WHAMMP2-203ENST00000563942 1603 ntBASIC32.19■■■□□ 2.74
PNMA6EA0A0J9YXQ4 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC32.19■■■□□ 2.74
PNMA6EA0A0J9YXQ4 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC32.18■■■□□ 2.74
PNMA6EA0A0J9YXQ4 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC32.18■■■□□ 2.74
PNMA6EA0A0J9YXQ4 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC32.18■■■□□ 2.74
PNMA6EA0A0J9YXQ4 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC32.17■■■□□ 2.74
PNMA6EA0A0J9YXQ4 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC32.17■■■□□ 2.74
PNMA6EA0A0J9YXQ4 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC32.17■■■□□ 2.74
PNMA6EA0A0J9YXQ4 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC32.17■■■□□ 2.74
PNMA6EA0A0J9YXQ4 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC32.16■■■□□ 2.74
PNMA6EA0A0J9YXQ4 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC32.16■■■□□ 2.74
PNMA6EA0A0J9YXQ4 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC32.15■■■□□ 2.74
PNMA6EA0A0J9YXQ4 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC32.14■■■□□ 2.74
PNMA6EA0A0J9YXQ4 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC32.14■■■□□ 2.74
PNMA6EA0A0J9YXQ4 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
PNMA6EA0A0J9YXQ4 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
PNMA6EA0A0J9YXQ4 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC32.13■■■□□ 2.73
PNMA6EA0A0J9YXQ4 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
PNMA6EA0A0J9YXQ4 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
PNMA6EA0A0J9YXQ4 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
PNMA6EA0A0J9YXQ4 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC32.11■■■□□ 2.73
PNMA6EA0A0J9YXQ4 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC32.11■■■□□ 2.73
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms