Protein–RNA interactions for Protein: P49588

AARS, Alanine--tRNA ligase, cytoplasmic, humanhuman

Known RBP eCLIP

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AARSP49588 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.267e-6■■□□□ 13.7
AARSP49588 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC15.66■□□□□ 0.17e-6■■□□□ 13.7
AARSP49588 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC15.56■□□□□ 0.087e-6■■□□□ 13.7
AARSP49588 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.047e-6■■□□□ 13.7
AARSP49588 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.027e-6■■□□□ 13.7
AARSP49588 EIF4A1-219ENST00000581770 447 ntTSL 215.06■□□□□ 07e-6■■□□□ 13.7
AARSP49588 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -07e-6■■□□□ 13.7
AARSP49588 EIF4A1-235ENST00000584860 1109 ntTSL 314.81□□□□□ -0.047e-6■■□□□ 13.7
AARSP49588 UBE2I-202ENST00000355803 3253 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.077e-6■■□□□ 13.7
AARSP49588 TGIF1-209ENST00000546979 554 ntTSL 314.41□□□□□ -0.17e-6■■□□□ 13.7
AARSP49588 EIF4A1-205ENST00000577738 531 ntTSL 213.93□□□□□ -0.187e-6■■□□□ 13.7
AARSP49588 KDM6A-214ENST00000621147 2876 ntTSL 1 (best) BASIC13.86□□□□□ -0.197e-6■■□□□ 13.7
AARSP49588 EIF4A1-214ENST00000580461 909 ntTSL 213.83□□□□□ -0.27e-6■■□□□ 13.7
AARSP49588 EEF2K-201ENST00000263026 7388 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.257e-6■■□□□ 13.7
AARSP49588 ZNF175-204ENST00000596504 580 ntTSL 2 BASIC13.48□□□□□ -0.257e-6■■□□□ 13.7
AARSP49588 AC087380.1-204ENST00000418729 1026 ntTSL 1 (best)13.22□□□□□ -0.297e-6■■□□□ 13.7
AARSP49588 ZNF175-203ENST00000545217 1239 ntTSL 1 (best) BASIC13.16□□□□□ -0.37e-6■■□□□ 13.7
AARSP49588 NFIA-210ENST00000479364 1010 ntTSL 513.12□□□□□ -0.317e-6■■□□□ 13.7
AARSP49588 EIF4A1-213ENST00000579139 568 ntTSL 412.78□□□□□ -0.367e-6■■□□□ 13.7
AARSP49588 KDM6A-201ENST00000377967 5438 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.397e-6■■□□□ 13.7
AARSP49588 NFIA-202ENST00000371184 1348 ntTSL 5 BASIC12.58□□□□□ -0.47e-6■■□□□ 13.7
AARSP49588 EIF4A1-226ENST00000582848 591 ntTSL 312.41□□□□□ -0.427e-6■■□□□ 13.7
AARSP49588 EIF4A1-236ENST00000584901 1021 ntTSL 212.41□□□□□ -0.427e-6■■□□□ 13.7
AARSP49588 EIF4A1-218ENST00000581544 1444 ntTSL 212.11□□□□□ -0.477e-6■■□□□ 13.7
AARSP49588 NFIA-207ENST00000403491 9487 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.497e-6■■□□□ 13.7
AARSP49588 AC016876.2-201ENST00000581621 4554 ntTSL 2 BASIC11.93□□□□□ -0.57e-6■■□□□ 13.7
AARSP49588 SENP3-EIF4A1-201ENST00000614237 3519 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.517e-6■■□□□ 13.7
AARSP49588 EIF4A1-223ENST00000582169 552 ntTSL 411.62□□□□□ -0.557e-6■■□□□ 13.7
AARSP49588 EIF4A1-229ENST00000583802 563 ntTSL 411.62□□□□□ -0.557e-6■■□□□ 13.7
AARSP49588 EIF4A1-225ENST00000582746 1645 ntTSL 5 BASIC11.6□□□□□ -0.557e-6■■□□□ 13.7
AARSP49588 NFIA-203ENST00000371185 1714 ntTSL 5 BASIC11.58□□□□□ -0.567e-6■■□□□ 13.7
AARSP49588 EIF4A1-231ENST00000584054 716 ntTSL 210.81□□□□□ -0.687e-6■■□□□ 13.7
AARSP49588 EIF4A1-215ENST00000580886 562 ntTSL 210.81□□□□□ -0.687e-6■■□□□ 13.7
AARSP49588 EIF4A1-217ENST00000581384 642 ntTSL 510.75□□□□□ -0.697e-6■■□□□ 13.7
AARSP49588 ZNF175-201ENST00000262259 6535 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.717e-6■■□□□ 13.7
AARSP49588 EIF4A1-233ENST00000584784 818 ntTSL 510.35□□□□□ -0.757e-6■■□□□ 13.7
AARSP49588 EIF4A1-232ENST00000584712 782 ntTSL 210.31□□□□□ -0.767e-6■■□□□ 13.7
AARSP49588 EIF4A1-209ENST00000578495 916 ntTSL 510.11□□□□□ -0.797e-6■■□□□ 13.7
AARSP49588 NFIA-212ENST00000485903 1674 ntTSL 5 BASIC10.09□□□□□ -0.797e-6■■□□□ 13.7
AARSP49588 HBE1-202ENST00000380237 913 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.87e-6■■□□□ 13.7
AARSP49588 TGIF1-216ENST00000550958 706 ntTSL 39.94□□□□□ -0.827e-6■■□□□ 13.7
AARSP49588 NFIA-208ENST00000407417 2123 ntTSL 2 BASIC9.63□□□□□ -0.877e-6■■□□□ 13.7
AARSP49588 EIF4A1-212ENST00000579085 569 ntTSL 49.63□□□□□ -0.877e-6■■□□□ 13.7
AARSP49588 NFIA-206ENST00000371191 1916 ntTSL 5 BASIC9.57□□□□□ -0.887e-6■■□□□ 13.7
AARSP49588 TGIF1-203ENST00000345133 1088 ntTSL 3 BASIC9.52□□□□□ -0.897e-6■■□□□ 13.7
AARSP49588 EIF4A1-237ENST00000585024 577 ntTSL 49.3□□□□□ -0.927e-6■■□□□ 13.7
AARSP49588 TGIF1-223ENST00000618001 3030 ntTSL 2 BASIC8.9□□□□□ -0.997e-6■■□□□ 13.7
AARSP49588 SMYD3-208ENST00000464398 540 ntTSL 38.74□□□□□ -1.017e-6■■□□□ 13.7
AARSP49588 EIF4A1-202ENST00000396527 1169 ntTSL 28.39□□□□□ -1.077e-6■■□□□ 13.7
AARSP49588 UGP2-220ENST00000487640 566 ntTSL 48.19□□□□□ -1.17e-6■■□□□ 13.7
AARSP49588 AC087380.1-201ENST00000420465 1001 ntTSL 37.96□□□□□ -1.147e-6■■□□□ 13.7
AARSP49588 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC7.76□□□□□ -1.177e-6■■□□□ 13.7
AARSP49588 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC7.54□□□□□ -1.27e-6■■□□□ 13.7
AARSP49588 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC7.03□□□□□ -1.287e-6■■□□□ 13.7
AARSP49588 EIF4A1-230ENST00000583899 665 ntTSL 36.81□□□□□ -1.327e-6■■□□□ 13.7
AARSP49588 AC087380.1-203ENST00000420726 752 ntTSL 56.42□□□□□ -1.387e-6■■□□□ 13.7
AARSP49588 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.97□□□□□ -1.457e-6■■□□□ 13.7
AARSP49588 EIF4A1-211ENST00000578754 547 ntTSL 45.9□□□□□ -1.467e-6■■□□□ 13.7
AARSP49588 USP15-213ENST00000549268 1087 ntTSL 55.88□□□□□ -1.477e-6■■□□□ 13.7
AARSP49588 HBE1-203ENST00000396895 578 ntTSL 55.85□□□□□ -1.477e-6■■□□□ 13.7
AARSP49588 TGIF1-215ENST00000549780 801 ntTSL 55.61□□□□□ -1.517e-6■■□□□ 13.7
AARSP49588 TGIF1-212ENST00000549253 563 ntTSL 35.55□□□□□ -1.527e-6■■□□□ 13.7
AARSP49588 TGIF1-214ENST00000549546 820 ntTSL 55.41□□□□□ -1.547e-6■■□□□ 13.7
AARSP49588 NFIA-214ENST00000496712 603 ntTSL 35.08□□□□□ -1.67e-6■■□□□ 13.7
AARSP49588 NFIA-209ENST00000476646 730 ntTSL 35.02□□□□□ -1.617e-6■■□□□ 13.7
AARSP49588 ANKRD28-202ENST00000412318 4408 ntTSL 24.6□□□□□ -1.677e-6■■□□□ 13.7
AARSP49588 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.36□□□□□ -1.717e-6■■□□□ 13.7
AARSP49588 EIF4A1-224ENST00000582213 560 ntTSL 44.15□□□□□ -1.757e-6■■□□□ 13.7
AARSP49588 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC3.67□□□□□ -1.827e-6■■□□□ 13.7
AARSP49588 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.867e-6■■□□□ 13.7
AARSP49588 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC26.34■■□□□ 1.812e-6■■□□□ 13.7
AARSP49588 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC24.79■■□□□ 1.562e-6■■□□□ 13.7
AARSP49588 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC24.61■■□□□ 1.532e-6■■□□□ 13.7
AARSP49588 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC23.67■■□□□ 1.382e-6■■□□□ 13.7
AARSP49588 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC29.63■■■□□ 2.332e-7■■□□□ 13.7
AARSP49588 SYNGAP1-206ENST00000479510 2073 ntTSL 227.37■■□□□ 1.972e-7■■□□□ 13.7
AARSP49588 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.562e-7■■□□□ 13.7
AARSP49588 SYNGAP1-227ENST00000638142 2499 ntTSL 522.48■■□□□ 1.192e-7■■□□□ 13.7
AARSP49588 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.122e-7■■□□□ 13.7
AARSP49588 PCED1A-204ENST00000448755 1170 ntTSL 320.02■□□□□ 0.82e-7■■□□□ 13.7
AARSP49588 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC19.89■□□□□ 0.772e-7■■□□□ 13.7
AARSP49588 DDX23-208ENST00000551098 1083 ntTSL 218.84■□□□□ 0.612e-7■■□□□ 13.7
AARSP49588 ERF-206ENST00000596818 566 ntTSL 317.5■□□□□ 0.392e-7■■□□□ 13.7
AARSP49588 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.43■□□□□ 0.382e-7■■□□□ 13.7
AARSP49588 PCED1A-203ENST00000439542 1187 ntTSL 217.19■□□□□ 0.342e-7■■□□□ 13.7
AARSP49588 PPP1R12C-203ENST00000586197 472 ntTSL 516.59■□□□□ 0.252e-7■■□□□ 13.7
AARSP49588 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC15.91■□□□□ 0.142e-7■■□□□ 13.7
AARSP49588 DDX23-218ENST00000553182 779 ntTSL 315.48■□□□□ 0.072e-7■■□□□ 13.7
AARSP49588 SYNGAP1-204ENST00000449372 3930 ntTSL 515.15■□□□□ 0.022e-7■■□□□ 13.7
AARSP49588 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.162e-7■■□□□ 13.7
AARSP49588 SYNGAP1-207ENST00000628646 4264 ntTSL 5 BASIC13.25□□□□□ -0.292e-7■■□□□ 13.7
AARSP49588 WDR60-201ENST00000397143 457 ntTSL 313.08□□□□□ -0.322e-7■■□□□ 13.7
AARSP49588 DDX23-207ENST00000550834 869 ntTSL 512.71□□□□□ -0.372e-7■■□□□ 13.7
AARSP49588 SYNGAP1-201ENST00000293748 4556 ntTSL 512.42□□□□□ -0.422e-7■■□□□ 13.7
AARSP49588 DDX23-201ENST00000308025 3248 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.512e-7■■□□□ 13.7
AARSP49588 DDX23-202ENST00000547135 1377 ntTSL 211.85□□□□□ -0.512e-7■■□□□ 13.7
AARSP49588 DDX23-209ENST00000551189 587 ntTSL 410.45□□□□□ -0.742e-7■■□□□ 13.7
AARSP49588 KIAA0368-203ENST00000374383 573 ntAPPRIS ALT2 TSL 29.21□□□□□ -0.942e-7■■□□□ 13.7
AARSP49588 DDX23-203ENST00000547165 958 ntTSL 58.78□□□□□ -12e-7■■□□□ 13.7
AARSP49588 GTF3C3-201ENST00000263956 4282 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.062e-7■■□□□ 13.7
Retrieved 100 of 8,200 protein–RNA pairs in 86.4 ms