RNA–Protein interactions for RNA: ENST00000581770.5

EIF4A1-219, Transcript of eukaryotic translation initiation factor 4A1, humanhuman

TSL 2

Gene EIF4A1, Length 447 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A1-219ENST00000581770 NISCHQ9Y2I1 1504 aa35.02■■■■□ 3.2
EIF4A1-219ENST00000581770 ABCC9O60706 1549 aa31.74■■■□□ 2.67
EIF4A1-219ENST00000581770 CCDC180Q9P1Z9 1646 aa31.55■■■□□ 2.64
EIF4A1-219ENST00000581770 RB1CC1Q8TDY2 1594 aa30.16■■■□□ 2.42
EIF4A1-219ENST00000581770 DNAJC5BQ9UF47 199 aa29.93■■■□□ 2.38
EIF4A1-219ENST00000581770 NACADO15069 1562 aa29.9■■■□□ 2.38
EIF4A1-219ENST00000581770 DCAF8L2P0C7V8 631 aa29.6■■■□□ 2.33
EIF4A1-219ENST00000581770 MYO15BQ96JP2 1530 aa29.47■■■□□ 2.31
EIF4A1-219ENST00000581770 PABPN1Q86U42 306 aaKnown RBP eCLIP29.47■■■□□ 2.31
EIF4A1-219ENST00000581770 UNC13AQ9UPW8 1703 aa29.34■■■□□ 2.29
EIF4A1-219ENST00000581770 BICRAQ9NZM4 1560 aa29.22■■■□□ 2.27
EIF4A1-219ENST00000581770 ZCCHC6Q5VYS8 1495 aaKnown RBP29■■■□□ 2.23
EIF4A1-219ENST00000581770 DCAF1Q9Y4B6 1507 aa28.98■■■□□ 2.23
EIF4A1-219ENST00000581770 SHROOM4Q9ULL8 1493 aa28.97■■■□□ 2.23
EIF4A1-219ENST00000581770 SCRIBQ14160 1630 aa28.68■■■□□ 2.18
EIF4A1-219ENST00000581770 CC2D2AQ9P2K1 1620 aa28.66■■■□□ 2.18
EIF4A1-219ENST00000581770 CECR2Q9BXF3 1484 aa28.65■■■□□ 2.18
EIF4A1-219ENST00000581770 EIF4G1Q04637 1599 aaKnown RBP28.57■■■□□ 2.16
EIF4A1-219ENST00000581770 DNAJC5Q9H3Z4 198 aa27.74■■■□□ 2.03
EIF4A1-219ENST00000581770 NCAPD3P42695 1498 aa27.61■■■□□ 2.01
EIF4A1-219ENST00000581770 CUX2O14529 1486 aa27.55■■■□□ 2
EIF4A1-219ENST00000581770 ERCC6Q03468 1493 aa27.47■■□□□ 1.99
EIF4A1-219ENST00000581770 ATAD2BQ9ULI0 1458 aa27.47■■□□□ 1.99
EIF4A1-219ENST00000581770 SMARCA2P51531 1590 aa27.41■■□□□ 1.98
EIF4A1-219ENST00000581770 HMGXB3Q12766 1538 aa27.4■■□□□ 1.98
EIF4A1-219ENST00000581770 SMARCA4P51532 1647 aa27.36■■□□□ 1.97
EIF4A1-219ENST00000581770 BAZ1AQ9NRL2 1556 aaPredicted RBP27.23■■□□□ 1.95
EIF4A1-219ENST00000581770 BAZ1BQ9UIG0 1483 aaKnown RBP27.2■■□□□ 1.95
EIF4A1-219ENST00000581770 NESP48681 1621 aa27.16■■□□□ 1.94
EIF4A1-219ENST00000581770 PEG3Q9GZU2 1588 aa27.14■■□□□ 1.94
EIF4A1-219ENST00000581770 LAMC3Q9Y6N6 1575 aa27.03■■□□□ 1.92
EIF4A1-219ENST00000581770 THOC2Q8NI27 1593 aaKnown RBP26.99■■□□□ 1.91
EIF4A1-219ENST00000581770 MROH2BQ7Z745 1585 aa26.94■■□□□ 1.9
EIF4A1-219ENST00000581770 PDS5BQ9NTI5 1447 aa26.9■■□□□ 1.9
EIF4A1-219ENST00000581770 KIF21AQ7Z4S6 1674 aa26.79■■□□□ 1.88
EIF4A1-219ENST00000581770 CADPSQ9ULU8 1353 aa26.75■■□□□ 1.87
EIF4A1-219ENST00000581770 MRC2Q9UBG0 1479 aa26.66■■□□□ 1.86
EIF4A1-219ENST00000581770 WDR62O43379 1518 aa26.6■■□□□ 1.85
EIF4A1-219ENST00000581770 WIZO95785 1651 aa26.57■■□□□ 1.84
EIF4A1-219ENST00000581770 CEP164Q9UPV0 1460 aa26.5■■□□□ 1.83
EIF4A1-219ENST00000581770 FANCD2Q9BXW9 1451 aa26.43■■□□□ 1.82
EIF4A1-219ENST00000581770 CFTRP13569 1480 aa26.4■■□□□ 1.82
EIF4A1-219ENST00000581770 TRIM41Q8WV44 630 aa26.38■■□□□ 1.81
EIF4A1-219ENST00000581770 RSF1Q96T23 1441 aaPredicted RBP26.32■■□□□ 1.8
EIF4A1-219ENST00000581770 TOP2AP11388 1531 aaKnown RBP26.31■■□□□ 1.8
EIF4A1-219ENST00000581770 URB2Q14146 1524 aaKnown RBP26.2■■□□□ 1.79
EIF4A1-219ENST00000581770 OSCARQ8IYS5 282 aa26.2■■□□□ 1.78
EIF4A1-219ENST00000581770 PRDM2Q13029 1718 aa26.04■■□□□ 1.76
EIF4A1-219ENST00000581770 IFT140Q96RY7 1462 aa26■■□□□ 1.75
EIF4A1-219ENST00000581770 CCDC88BA6NC98 1476 aa25.98■■□□□ 1.75
EIF4A1-219ENST00000581770 ZNF608Q9ULD9 1512 aaPredicted RBP25.91■■□□□ 1.74
EIF4A1-219ENST00000581770 TOPBP1Q92547 1522 aa25.9■■□□□ 1.74
EIF4A1-219ENST00000581770 ABCC8Q09428 1581 aa25.89■■□□□ 1.73
EIF4A1-219ENST00000581770 RIMBP3CA6NJZ7 1639 aa25.85■■□□□ 1.73
EIF4A1-219ENST00000581770 RIMBP3BA6NNM3 1639 aa25.85■■□□□ 1.73
EIF4A1-219ENST00000581770 RIMBP3Q9UFD9 1639 aa25.85■■□□□ 1.73
EIF4A1-219ENST00000581770 DNMBPQ6XZF7 1577 aa25.8■■□□□ 1.72
EIF4A1-219ENST00000581770 ARHGEF11O15085 1522 aa25.78■■□□□ 1.72
EIF4A1-219ENST00000581770 EIF4G3O43432 1585 aaKnown RBP25.78■■□□□ 1.72
EIF4A1-219ENST00000581770 TARBP1Q13395 1621 aaKnown RBP25.66■■□□□ 1.7
EIF4A1-219ENST00000581770 AQRO60306 1485 aaKnown RBP eCLIP25.65■■□□□ 1.76e-7■■■□□ 15.2
EIF4A1-219ENST00000581770 POLA1P09884 1462 aaPredicted RBP25.62■■□□□ 1.69
EIF4A1-219ENST00000581770 CHD1O14646 1710 aa25.57■■□□□ 1.68
EIF4A1-219ENST00000581770 CYB5RLQ6IPT4 315 aa25.56■■□□□ 1.68
EIF4A1-219ENST00000581770 FBLN2P98095 1184 aa25.53■■□□□ 1.68
EIF4A1-219ENST00000581770 SOGA1O94964 1423 aa25.5■■□□□ 1.67
EIF4A1-219ENST00000581770 ARAP1Q96P48 1450 aa25.5■■□□□ 1.67
EIF4A1-219ENST00000581770 RAD54L2Q9Y4B4 1467 aa25.49■■□□□ 1.67
EIF4A1-219ENST00000581770 WDR97A6NE52 1622 aa25.48■■□□□ 1.67
EIF4A1-219ENST00000581770 TDRD9Q8NDG6 1382 aaKnown RBP25.45■■□□□ 1.67
EIF4A1-219ENST00000581770 FGD5Q6ZNL6 1462 aa25.42■■□□□ 1.66
EIF4A1-219ENST00000581770 SNAPC4Q5SXM2 1469 aa25.41■■□□□ 1.66
EIF4A1-219ENST00000581770 MAGI1Q96QZ7 1491 aaPredicted RBP25.38■■□□□ 1.65
EIF4A1-219ENST00000581770 TRHP20396 242 aaPredicted RBP25.36■■□□□ 1.65
EIF4A1-219ENST00000581770 CLASP1Q7Z460 1538 aa25.35■■□□□ 1.65
EIF4A1-219ENST00000581770 CUX1P39880 1505 aa25.34■■□□□ 1.65
EIF4A1-219ENST00000581770 CHMP7Q8WUX9 453 aaPredicted RBP25.34■■□□□ 1.65
EIF4A1-219ENST00000581770 SYNJ1O43426 1573 aa25.34■■□□□ 1.65
EIF4A1-219ENST00000581770 GRIN2BQ13224 1484 aa25.34■■□□□ 1.65
EIF4A1-219ENST00000581770 SYNJ2O15056 1496 aa25.28■■□□□ 1.64
EIF4A1-219ENST00000581770 GAPVD1Q14C86 1478 aa25.2■■□□□ 1.62
EIF4A1-219ENST00000581770 ABCA10Q8WWZ4 1543 aa25.16■■□□□ 1.62
EIF4A1-219ENST00000581770 PBRM1Q86U86 1689 aa25.14■■□□□ 1.62
EIF4A1-219ENST00000581770 ABCA5Q8WWZ7 1642 aa25.11■■□□□ 1.61
EIF4A1-219ENST00000581770 WRNQ14191 1432 aaPredicted RBP eCLIP25.01■■□□□ 1.593e-6■□□□□ 9.1
EIF4A1-219ENST00000581770 GRIN2AQ12879 1464 aa25■■□□□ 1.59
EIF4A1-219ENST00000581770 ADAMTS12P58397 1594 aa24.94■■□□□ 1.58
EIF4A1-219ENST00000581770 NUP160Q12769 1436 aa24.94■■□□□ 1.58
EIF4A1-219ENST00000581770 SUPT5HO00267 1087 aaKnown RBP24.92■■□□□ 1.58
EIF4A1-219ENST00000581770 FHAD1B1AJZ9 1412 aa24.89■■□□□ 1.58
EIF4A1-219ENST00000581770 TOP2BQ02880 1626 aa24.89■■□□□ 1.57
EIF4A1-219ENST00000581770 BIVM-ERCC5R4GMW8 1640 aa24.88■■□□□ 1.57
EIF4A1-219ENST00000581770 CEP170Q5SW79 1584 aa24.88■■□□□ 1.57
EIF4A1-219ENST00000581770 ERCC6L2Q5T890 1561 aa24.87■■□□□ 1.57
EIF4A1-219ENST00000581770 AEBP2Q6ZN18 517 aaPredicted RBP24.84■■□□□ 1.57
EIF4A1-219ENST00000581770 ERICH3Q5RHP9 1530 aa24.84■■□□□ 1.57
EIF4A1-219ENST00000581770 SHROOM2Q13796 1616 aa24.82■■□□□ 1.56
EIF4A1-219ENST00000581770 PRG4Q92954 1404 aaPredicted RBP24.69■■□□□ 1.54
EIF4A1-219ENST00000581770 JPH4Q96JJ6 628 aa24.65■■□□□ 1.54
EIF4A1-219ENST00000581770 RUSC2Q8N2Y8 1516 aa24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms