RNA–Protein interactions for RNA: ENST00000551189.1

DDX23-209, Transcript of DEAD-box helicase 23, humanhuman

TSL 4

Gene DDX23, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX23-209ENST00000551189 NISCHQ9Y2I1 1504 aa22.7■■□□□ 1.22
DDX23-209ENST00000551189 CCDC180Q9P1Z9 1646 aa19.96■□□□□ 0.79
DDX23-209ENST00000551189 ABCC9O60706 1549 aa19.1■□□□□ 0.65
DDX23-209ENST00000551189 ZCCHC6Q5VYS8 1495 aaKnown RBP19.02■□□□□ 0.63
DDX23-209ENST00000551189 DCAF8L2P0C7V8 631 aa18.89■□□□□ 0.61
DDX23-209ENST00000551189 DCAF1Q9Y4B6 1507 aa18.78■□□□□ 0.6
DDX23-209ENST00000551189 MYO15BQ96JP2 1530 aa18.65■□□□□ 0.58
DDX23-209ENST00000551189 NACADO15069 1562 aa18.65■□□□□ 0.58
DDX23-209ENST00000551189 RB1CC1Q8TDY2 1594 aa18.57■□□□□ 0.56
DDX23-209ENST00000551189 SHROOM4Q9ULL8 1493 aa18.36■□□□□ 0.53
DDX23-209ENST00000551189 SCRIBQ14160 1630 aa18.32■□□□□ 0.52
DDX23-209ENST00000551189 UNC13AQ9UPW8 1703 aa18.12■□□□□ 0.49
DDX23-209ENST00000551189 PABPN1Q86U42 306 aaKnown RBP eCLIP17.95■□□□□ 0.46
DDX23-209ENST00000551189 BICRAQ9NZM4 1560 aa17.94■□□□□ 0.46
DDX23-209ENST00000551189 CECR2Q9BXF3 1484 aa17.63■□□□□ 0.41
DDX23-209ENST00000551189 BAZ1AQ9NRL2 1556 aaPredicted RBP17.58■□□□□ 0.41
DDX23-209ENST00000551189 SUPT5HO00267 1087 aaKnown RBP17.53■□□□□ 0.4
DDX23-209ENST00000551189 SMARCA4P51532 1647 aa17.53■□□□□ 0.4
DDX23-209ENST00000551189 MROH2BQ7Z745 1585 aa17.52■□□□□ 0.39
DDX23-209ENST00000551189 RSF1Q96T23 1441 aaPredicted RBP17.49■□□□□ 0.39
DDX23-209ENST00000551189 EIF4G1Q04637 1599 aaKnown RBP17.46■□□□□ 0.39
DDX23-209ENST00000551189 WIZO95785 1651 aa17.36■□□□□ 0.37
DDX23-209ENST00000551189 SMARCA2P51531 1590 aa17.32■□□□□ 0.36
DDX23-209ENST00000551189 ATAD2BQ9ULI0 1458 aa17.3■□□□□ 0.36
DDX23-209ENST00000551189 PEG3Q9GZU2 1588 aa17.29■□□□□ 0.36
DDX23-209ENST00000551189 CC2D2AQ9P2K1 1620 aa17.28■□□□□ 0.36
DDX23-209ENST00000551189 BAZ1BQ9UIG0 1483 aaKnown RBP17.22■□□□□ 0.35
DDX23-209ENST00000551189 TOP2AP11388 1531 aaKnown RBP17.21■□□□□ 0.35
DDX23-209ENST00000551189 NCAPD3P42695 1498 aa17.18■□□□□ 0.34
DDX23-209ENST00000551189 HMGXB3Q12766 1538 aa17.16■□□□□ 0.34
DDX23-209ENST00000551189 DNAJC5BQ9UF47 199 aa17.01■□□□□ 0.31
DDX23-209ENST00000551189 CCDC88BA6NC98 1476 aa17■□□□□ 0.31
DDX23-209ENST00000551189 AEBP2Q6ZN18 517 aaPredicted RBP16.76■□□□□ 0.27
DDX23-209ENST00000551189 CADPSQ9ULU8 1353 aa16.75■□□□□ 0.27
DDX23-209ENST00000551189 CFTRP13569 1480 aa16.73■□□□□ 0.27
DDX23-209ENST00000551189 LAMC3Q9Y6N6 1575 aa16.68■□□□□ 0.26
DDX23-209ENST00000551189 NESP48681 1621 aa16.66■□□□□ 0.26
DDX23-209ENST00000551189 PRDM2Q13029 1718 aa16.65■□□□□ 0.26
DDX23-209ENST00000551189 CHIC1Q5VXU3 224 aa16.6■□□□□ 0.25
DDX23-209ENST00000551189 PDS5BQ9NTI5 1447 aa16.58■□□□□ 0.24
DDX23-209ENST00000551189 FANCD2Q9BXW9 1451 aa16.57■□□□□ 0.24
DDX23-209ENST00000551189 ABCC8Q09428 1581 aa16.56■□□□□ 0.24
DDX23-209ENST00000551189 TRIM41Q8WV44 630 aa16.52■□□□□ 0.24
DDX23-209ENST00000551189 WRNQ14191 1432 aaPredicted RBP eCLIP16.52■□□□□ 0.23
DDX23-209ENST00000551189 CEP164Q9UPV0 1460 aa16.51■□□□□ 0.23
DDX23-209ENST00000551189 KIF21AQ7Z4S6 1674 aa16.47■□□□□ 0.23
DDX23-209ENST00000551189 ERCC6Q03468 1493 aa16.47■□□□□ 0.23
DDX23-209ENST00000551189 SYNJ1O43426 1573 aa16.43■□□□□ 0.22
DDX23-209ENST00000551189 CUX1P39880 1505 aa16.41■□□□□ 0.22
DDX23-209ENST00000551189 TOP2BQ02880 1626 aa16.4■□□□□ 0.22
DDX23-209ENST00000551189 BIVM-ERCC5R4GMW8 1640 aa16.39■□□□□ 0.21
DDX23-209ENST00000551189 DNMBPQ6XZF7 1577 aa16.38■□□□□ 0.21
DDX23-209ENST00000551189 MRC2Q9UBG0 1479 aa16.37■□□□□ 0.21
DDX23-209ENST00000551189 URB2Q14146 1524 aaKnown RBP16.35■□□□□ 0.21
DDX23-209ENST00000551189 TOPBP1Q92547 1522 aa16.35■□□□□ 0.21
DDX23-209ENST00000551189 FGD5Q6ZNL6 1462 aa16.29■□□□□ 0.2
DDX23-209ENST00000551189 THOC2Q8NI27 1593 aaKnown RBP16.28■□□□□ 0.2
DDX23-209ENST00000551189 WDR62O43379 1518 aa16.28■□□□□ 0.2
DDX23-209ENST00000551189 POLA1P09884 1462 aaPredicted RBP16.23■□□□□ 0.19
DDX23-209ENST00000551189 SOGA1O94964 1423 aa16.2■□□□□ 0.18
DDX23-209ENST00000551189 FAM9AQ8IZU1 332 aaPredicted RBP16.2■□□□□ 0.18
DDX23-209ENST00000551189 RAD54L2Q9Y4B4 1467 aa16.18■□□□□ 0.18
DDX23-209ENST00000551189 EEA1Q15075 1411 aa16.16■□□□□ 0.18
DDX23-209ENST00000551189 CUX2O14529 1486 aa16.16■□□□□ 0.18
DDX23-209ENST00000551189 KIF27Q86VH2 1401 aa16.14■□□□□ 0.17
DDX23-209ENST00000551189 IFT140Q96RY7 1462 aa16.14■□□□□ 0.17
DDX23-209ENST00000551189 ABCA10Q8WWZ4 1543 aa16.14■□□□□ 0.17
DDX23-209ENST00000551189 RUSC2Q8N2Y8 1516 aa16.12■□□□□ 0.17
DDX23-209ENST00000551189 TARBP1Q13395 1621 aaKnown RBP16.11■□□□□ 0.17
DDX23-209ENST00000551189 WDR97A6NE52 1622 aa16.1■□□□□ 0.17
DDX23-209ENST00000551189 CSRNP3Q8WYN3 585 aa16.06■□□□□ 0.16
DDX23-209ENST00000551189 TDRD9Q8NDG6 1382 aaKnown RBP16.05■□□□□ 0.16
DDX23-209ENST00000551189 GAPVD1Q14C86 1478 aa16.03■□□□□ 0.16
DDX23-209ENST00000551189 ABCA5Q8WWZ7 1642 aa16.02■□□□□ 0.16
DDX23-209ENST00000551189 ZNF608Q9ULD9 1512 aaPredicted RBP16.01■□□□□ 0.15
DDX23-209ENST00000551189 EHMT2Q96KQ7 1210 aa16■□□□□ 0.15
DDX23-209ENST00000551189 AQRO60306 1485 aaKnown RBP eCLIP15.99■□□□□ 0.152e-6■□□□□ 8.5
DDX23-209ENST00000551189 EIF4G3O43432 1585 aaKnown RBP15.97■□□□□ 0.15
DDX23-209ENST00000551189 IGF1RP08069 1367 aa15.97■□□□□ 0.15
DDX23-209ENST00000551189 ERICH3Q5RHP9 1530 aa15.96■□□□□ 0.15
DDX23-209ENST00000551189 PBRM1Q86U86 1689 aa15.95■□□□□ 0.14
DDX23-209ENST00000551189 GRIN2BQ13224 1484 aa15.95■□□□□ 0.14
DDX23-209ENST00000551189 KIF21BO75037 1637 aa15.94■□□□□ 0.14
DDX23-209ENST00000551189 LOC105371045A0A1W2PR82 267 aa15.94■□□□□ 0.14
DDX23-209ENST00000551189 CARMIL1Q5VZK9 1371 aa15.93■□□□□ 0.14
DDX23-209ENST00000551189 CUL7Q14999 1698 aa15.92■□□□□ 0.14
DDX23-209ENST00000551189 GOLGA3Q08378 1498 aa15.92■□□□□ 0.14
DDX23-209ENST00000551189 PRXQ9BXM0 1461 aa15.91■□□□□ 0.14
DDX23-209ENST00000551189 SNAPC4Q5SXM2 1469 aa15.88■□□□□ 0.13
DDX23-209ENST00000551189 RAPGEF2Q9Y4G8 1499 aa15.88■□□□□ 0.13
DDX23-209ENST00000551189 UBTFP17480 764 aaKnown RBP15.87■□□□□ 0.13
DDX23-209ENST00000551189 ADAMTS12P58397 1594 aa15.86■□□□□ 0.13
DDX23-209ENST00000551189 FHAD1B1AJZ9 1412 aa15.85■□□□□ 0.13
DDX23-209ENST00000551189 MAGI1Q96QZ7 1491 aaPredicted RBP15.84■□□□□ 0.13
DDX23-209ENST00000551189 TNIKQ9UKE5 1360 aa15.79■□□□□ 0.12
DDX23-209ENST00000551189 FBLN2P98095 1184 aa15.78■□□□□ 0.12
DDX23-209ENST00000551189 CHMP7Q8WUX9 453 aaPredicted RBP15.78■□□□□ 0.12
DDX23-209ENST00000551189 SYNJ2O15056 1496 aa15.78■□□□□ 0.12
DDX23-209ENST00000551189 GRIN2AQ12879 1464 aa15.74■□□□□ 0.11
DDX23-209ENST00000551189 CTTNBP2Q8WZ74 1663 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms