RNA–Protein interactions for RNA: ENST00000485903.6

NFIA-212, Transcript of nuclear factor I A, humanhuman

TSL 5 BASIC

Gene NFIA, Length 1,674 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIA-212ENST00000485903 NISCHQ9Y2I1 1504 aa20.66■□□□□ 0.9
NFIA-212ENST00000485903 CCDC180Q9P1Z9 1646 aa18.47■□□□□ 0.55
NFIA-212ENST00000485903 ABCC9O60706 1549 aa18.34■□□□□ 0.53
NFIA-212ENST00000485903 RB1CC1Q8TDY2 1594 aa17.49■□□□□ 0.39
NFIA-212ENST00000485903 NACADO15069 1562 aa17.41■□□□□ 0.38
NFIA-212ENST00000485903 DCAF8L2P0C7V8 631 aa17.32■□□□□ 0.36
NFIA-212ENST00000485903 MYO15BQ96JP2 1530 aa17.21■□□□□ 0.35
NFIA-212ENST00000485903 UNC13AQ9UPW8 1703 aa17.21■□□□□ 0.34
NFIA-212ENST00000485903 ZCCHC6Q5VYS8 1495 aaKnown RBP17.16■□□□□ 0.34
NFIA-212ENST00000485903 DNAJC5BQ9UF47 199 aa17.13■□□□□ 0.33
NFIA-212ENST00000485903 PABPN1Q86U42 306 aaKnown RBP eCLIP17.1■□□□□ 0.33
NFIA-212ENST00000485903 BICRAQ9NZM4 1560 aa17.06■□□□□ 0.32
NFIA-212ENST00000485903 DCAF1Q9Y4B6 1507 aa17.06■□□□□ 0.32
NFIA-212ENST00000485903 SCRIBQ14160 1630 aa16.86■□□□□ 0.29
NFIA-212ENST00000485903 SHROOM4Q9ULL8 1493 aa16.74■□□□□ 0.27
NFIA-212ENST00000485903 CC2D2AQ9P2K1 1620 aa16.59■□□□□ 0.25
NFIA-212ENST00000485903 EIF4G1Q04637 1599 aaKnown RBP16.58■□□□□ 0.25
NFIA-212ENST00000485903 CECR2Q9BXF3 1484 aa16.49■□□□□ 0.23
NFIA-212ENST00000485903 SMARCA4P51532 1647 aa16.1■□□□□ 0.17
NFIA-212ENST00000485903 NCAPD3P42695 1498 aa16.08■□□□□ 0.16
NFIA-212ENST00000485903 ATAD2BQ9ULI0 1458 aa16.07■□□□□ 0.16
NFIA-212ENST00000485903 BAZ1AQ9NRL2 1556 aaPredicted RBP16.01■□□□□ 0.15
NFIA-212ENST00000485903 SMARCA2P51531 1590 aa16■□□□□ 0.15
NFIA-212ENST00000485903 HMGXB3Q12766 1538 aa15.98■□□□□ 0.15
NFIA-212ENST00000485903 PELP1Q8IZL8 1130 aaKnown RBP15.97■□□□□ 0.15
NFIA-212ENST00000485903 MROH2BQ7Z745 1585 aa15.95■□□□□ 0.14
NFIA-212ENST00000485903 PEG3Q9GZU2 1588 aa15.94■□□□□ 0.14
NFIA-212ENST00000485903 BAZ1BQ9UIG0 1483 aaKnown RBP15.89■□□□□ 0.13
NFIA-212ENST00000485903 NESP48681 1621 aa15.83■□□□□ 0.13
NFIA-212ENST00000485903 WIZO95785 1651 aa15.78■□□□□ 0.12
NFIA-212ENST00000485903 ERCC6Q03468 1493 aa15.77■□□□□ 0.12
NFIA-212ENST00000485903 MYT1Q01538 1121 aa15.75■□□□□ 0.11
NFIA-212ENST00000485903 CUX2O14529 1486 aa15.71■□□□□ 0.1
NFIA-212ENST00000485903 LAMC3Q9Y6N6 1575 aa15.69■□□□□ 0.1
NFIA-212ENST00000485903 RSF1Q96T23 1441 aaPredicted RBP15.65■□□□□ 0.1
NFIA-212ENST00000485903 THOC2Q8NI27 1593 aaKnown RBP15.64■□□□□ 0.09
NFIA-212ENST00000485903 KIF21AQ7Z4S6 1674 aa15.64■□□□□ 0.09
NFIA-212ENST00000485903 CADPSQ9ULU8 1353 aa15.58■□□□□ 0.09
NFIA-212ENST00000485903 PDS5BQ9NTI5 1447 aa15.56■□□□□ 0.08
NFIA-212ENST00000485903 TOP2AP11388 1531 aaKnown RBP15.55■□□□□ 0.08
NFIA-212ENST00000485903 DNAJC5Q9H3Z4 198 aa15.54■□□□□ 0.08
NFIA-212ENST00000485903 CFTRP13569 1480 aa15.46■□□□□ 0.06
NFIA-212ENST00000485903 MRC2Q9UBG0 1479 aa15.44■□□□□ 0.06
NFIA-212ENST00000485903 WDR62O43379 1518 aa15.43■□□□□ 0.06
NFIA-212ENST00000485903 FANCD2Q9BXW9 1451 aa15.42■□□□□ 0.06
NFIA-212ENST00000485903 CEP164Q9UPV0 1460 aa15.41■□□□□ 0.06
NFIA-212ENST00000485903 CHIC1Q5VXU3 224 aa15.4■□□□□ 0.06
NFIA-212ENST00000485903 CCDC88BA6NC98 1476 aa15.38■□□□□ 0.05
NFIA-212ENST00000485903 PRDM2Q13029 1718 aa15.35■□□□□ 0.05
NFIA-212ENST00000485903 SUPT5HO00267 1087 aaKnown RBP15.33■□□□□ 0.04
NFIA-212ENST00000485903 URB2Q14146 1524 aaKnown RBP15.32■□□□□ 0.04
NFIA-212ENST00000485903 TOPBP1Q92547 1522 aa15.16■□□□□ 0.02
NFIA-212ENST00000485903 TTBK1Q5TCY1 1321 aaPredicted RBP15.15■□□□□ 0.02
NFIA-212ENST00000485903 ZNF608Q9ULD9 1512 aaPredicted RBP15.11■□□□□ 0.01
NFIA-212ENST00000485903 DNMBPQ6XZF7 1577 aa15.11■□□□□ 0.01
NFIA-212ENST00000485903 IFT140Q96RY7 1462 aa15.09■□□□□ 0.01
NFIA-212ENST00000485903 ABCC8Q09428 1581 aa15.07■□□□□ 0
NFIA-212ENST00000485903 TARBP1Q13395 1621 aaKnown RBP15.04■□□□□ -0
NFIA-212ENST00000485903 EIF4G3O43432 1585 aaKnown RBP15.02■□□□□ -0
NFIA-212ENST00000485903 POLA1P09884 1462 aaPredicted RBP15.02■□□□□ -0
NFIA-212ENST00000485903 OSCARQ8IYS5 282 aa15□□□□□ -0.01
NFIA-212ENST00000485903 AQRO60306 1485 aaKnown RBP eCLIP14.98□□□□□ -0.011e-7■■□□□ 12.1
NFIA-212ENST00000485903 RAD54L2Q9Y4B4 1467 aa14.98□□□□□ -0.01
NFIA-212ENST00000485903 CUX1P39880 1505 aa14.97□□□□□ -0.01
NFIA-212ENST00000485903 FGD5Q6ZNL6 1462 aa14.94□□□□□ -0.02
NFIA-212ENST00000485903 SOGA1O94964 1423 aa14.92□□□□□ -0.02
NFIA-212ENST00000485903 TRIM41Q8WV44 630 aa14.91□□□□□ -0.02
NFIA-212ENST00000485903 CHD1O14646 1710 aa14.91□□□□□ -0.02
NFIA-212ENST00000485903 TDRD9Q8NDG6 1382 aaKnown RBP14.9□□□□□ -0.02
NFIA-212ENST00000485903 HRCP23327 699 aa14.9□□□□□ -0.02
NFIA-212ENST00000485903 WDR97A6NE52 1622 aa14.87□□□□□ -0.03
NFIA-212ENST00000485903 RIMBP3CA6NJZ7 1639 aa14.86□□□□□ -0.03
NFIA-212ENST00000485903 RIMBP3BA6NNM3 1639 aa14.86□□□□□ -0.03
NFIA-212ENST00000485903 RIMBP3Q9UFD9 1639 aa14.86□□□□□ -0.03
NFIA-212ENST00000485903 SNAPC4Q5SXM2 1469 aa14.81□□□□□ -0.04
NFIA-212ENST00000485903 ARHGEF11O15085 1522 aa14.81□□□□□ -0.04
NFIA-212ENST00000485903 FBLN2P98095 1184 aa14.79□□□□□ -0.04
NFIA-212ENST00000485903 PBRM1Q86U86 1689 aa14.78□□□□□ -0.04
NFIA-212ENST00000485903 GRIN2BQ13224 1484 aa14.77□□□□□ -0.04
NFIA-212ENST00000485903 ABCA10Q8WWZ4 1543 aa14.77□□□□□ -0.04
NFIA-212ENST00000485903 SYNJ1O43426 1573 aa14.77□□□□□ -0.04
NFIA-212ENST00000485903 BIVM-ERCC5R4GMW8 1640 aa14.77□□□□□ -0.05
NFIA-212ENST00000485903 ABCA5Q8WWZ7 1642 aa14.76□□□□□ -0.05
NFIA-212ENST00000485903 MAGI1Q96QZ7 1491 aaPredicted RBP14.76□□□□□ -0.05
NFIA-212ENST00000485903 TOP2BQ02880 1626 aa14.76□□□□□ -0.05
NFIA-212ENST00000485903 GAPVD1Q14C86 1478 aa14.75□□□□□ -0.05
NFIA-212ENST00000485903 WRNQ14191 1432 aaPredicted RBP eCLIP14.74□□□□□ -0.05
NFIA-212ENST00000485903 CLASP1Q7Z460 1538 aa14.72□□□□□ -0.05
NFIA-212ENST00000485903 SYNJ2O15056 1496 aa14.71□□□□□ -0.05
NFIA-212ENST00000485903 CHMP7Q8WUX9 453 aaPredicted RBP14.7□□□□□ -0.06
NFIA-212ENST00000485903 ARAP1Q96P48 1450 aa14.69□□□□□ -0.06
NFIA-212ENST00000485903 CYB5RLQ6IPT4 315 aa14.66□□□□□ -0.06
NFIA-212ENST00000485903 ADAMTS12P58397 1594 aa14.63□□□□□ -0.07
NFIA-212ENST00000485903 AEBP2Q6ZN18 517 aaPredicted RBP14.61□□□□□ -0.07
NFIA-212ENST00000485903 GRIN2AQ12879 1464 aa14.6□□□□□ -0.07
NFIA-212ENST00000485903 ERICH3Q5RHP9 1530 aa14.57□□□□□ -0.08
NFIA-212ENST00000485903 CEP170Q5SW79 1584 aa14.57□□□□□ -0.08
NFIA-212ENST00000485903 FHAD1B1AJZ9 1412 aa14.55□□□□□ -0.08
NFIA-212ENST00000485903 NUP160Q12769 1436 aa14.55□□□□□ -0.08
NFIA-212ENST00000485903 ERCC6L2Q5T890 1561 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms