RNA–Protein interactions for RNA: ENST00000577738.5

EIF4A1-205, Transcript of eukaryotic translation initiation factor 4A1, humanhuman

TSL 2

Gene EIF4A1, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A1-205ENST00000577738 NISCHQ9Y2I1 1504 aa31.24■■■□□ 2.59
EIF4A1-205ENST00000577738 CCDC180Q9P1Z9 1646 aa27.77■■■□□ 2.04
EIF4A1-205ENST00000577738 ABCC9O60706 1549 aa26.74■■□□□ 1.87
EIF4A1-205ENST00000577738 ZCCHC6Q5VYS8 1495 aaKnown RBP26.14■■□□□ 1.78
EIF4A1-205ENST00000577738 NACADO15069 1562 aa25.91■■□□□ 1.74
EIF4A1-205ENST00000577738 DCAF1Q9Y4B6 1507 aa25.88■■□□□ 1.73
EIF4A1-205ENST00000577738 RB1CC1Q8TDY2 1594 aa25.87■■□□□ 1.73
EIF4A1-205ENST00000577738 MYO15BQ96JP2 1530 aa25.87■■□□□ 1.73
EIF4A1-205ENST00000577738 DCAF8L2P0C7V8 631 aa25.68■■□□□ 1.7
EIF4A1-205ENST00000577738 UNC13AQ9UPW8 1703 aa25.57■■□□□ 1.68
EIF4A1-205ENST00000577738 SCRIBQ14160 1630 aa25.3■■□□□ 1.64
EIF4A1-205ENST00000577738 BICRAQ9NZM4 1560 aa25.22■■□□□ 1.63
EIF4A1-205ENST00000577738 PABPN1Q86U42 306 aaKnown RBP eCLIP24.93■■□□□ 1.58
EIF4A1-205ENST00000577738 SHROOM4Q9ULL8 1493 aa24.84■■□□□ 1.57
EIF4A1-205ENST00000577738 EIF4G1Q04637 1599 aaKnown RBP24.46■■□□□ 1.51
EIF4A1-205ENST00000577738 DNAJC5BQ9UF47 199 aa24.44■■□□□ 1.5
EIF4A1-205ENST00000577738 CECR2Q9BXF3 1484 aa24.32■■□□□ 1.48
EIF4A1-205ENST00000577738 CC2D2AQ9P2K1 1620 aa24.29■■□□□ 1.48
EIF4A1-205ENST00000577738 SMARCA4P51532 1647 aa24.26■■□□□ 1.47
EIF4A1-205ENST00000577738 BAZ1AQ9NRL2 1556 aaPredicted RBP24.18■■□□□ 1.46
EIF4A1-205ENST00000577738 MROH2BQ7Z745 1585 aa24.12■■□□□ 1.45
EIF4A1-205ENST00000577738 PEG3Q9GZU2 1588 aa24.02■■□□□ 1.44
EIF4A1-205ENST00000577738 ATAD2BQ9ULI0 1458 aa23.95■■□□□ 1.42
EIF4A1-205ENST00000577738 WIZO95785 1651 aa23.93■■□□□ 1.42
EIF4A1-205ENST00000577738 SMARCA2P51531 1590 aa23.93■■□□□ 1.42
EIF4A1-205ENST00000577738 RSF1Q96T23 1441 aaPredicted RBP23.88■■□□□ 1.41
EIF4A1-205ENST00000577738 NCAPD3P42695 1498 aa23.87■■□□□ 1.41
EIF4A1-205ENST00000577738 HMGXB3Q12766 1538 aa23.87■■□□□ 1.41
EIF4A1-205ENST00000577738 BAZ1BQ9UIG0 1483 aaKnown RBP23.75■■□□□ 1.39
EIF4A1-205ENST00000577738 TOP2AP11388 1531 aaKnown RBP23.64■■□□□ 1.37
EIF4A1-205ENST00000577738 SUPT5HO00267 1087 aaKnown RBP23.3■■□□□ 1.32
EIF4A1-205ENST00000577738 CCDC88BA6NC98 1476 aa23.3■■□□□ 1.32
EIF4A1-205ENST00000577738 NESP48681 1621 aa23.3■■□□□ 1.32
EIF4A1-205ENST00000577738 LAMC3Q9Y6N6 1575 aa23.26■■□□□ 1.31
EIF4A1-205ENST00000577738 PRDM2Q13029 1718 aa23.22■■□□□ 1.31
EIF4A1-205ENST00000577738 DNAJC5Q9H3Z4 198 aa23.21■■□□□ 1.31
EIF4A1-205ENST00000577738 KIF21AQ7Z4S6 1674 aa23.15■■□□□ 1.3
EIF4A1-205ENST00000577738 CFTRP13569 1480 aa23.14■■□□□ 1.29
EIF4A1-205ENST00000577738 CADPSQ9ULU8 1353 aa23.14■■□□□ 1.29
EIF4A1-205ENST00000577738 THOC2Q8NI27 1593 aaKnown RBP22.98■■□□□ 1.27
EIF4A1-205ENST00000577738 PDS5BQ9NTI5 1447 aa22.94■■□□□ 1.26
EIF4A1-205ENST00000577738 ERCC6Q03468 1493 aa22.93■■□□□ 1.26
EIF4A1-205ENST00000577738 FANCD2Q9BXW9 1451 aa22.92■■□□□ 1.26
EIF4A1-205ENST00000577738 CEP164Q9UPV0 1460 aa22.87■■□□□ 1.25
EIF4A1-205ENST00000577738 MRC2Q9UBG0 1479 aa22.79■■□□□ 1.24
EIF4A1-205ENST00000577738 WDR62O43379 1518 aa22.79■■□□□ 1.24
EIF4A1-205ENST00000577738 URB2Q14146 1524 aaKnown RBP22.76■■□□□ 1.23
EIF4A1-205ENST00000577738 CUX2O14529 1486 aa22.66■■□□□ 1.22
EIF4A1-205ENST00000577738 DNMBPQ6XZF7 1577 aa22.66■■□□□ 1.22
EIF4A1-205ENST00000577738 TOPBP1Q92547 1522 aa22.64■■□□□ 1.21
EIF4A1-205ENST00000577738 CUX1P39880 1505 aa22.62■■□□□ 1.21
EIF4A1-205ENST00000577738 ABCC8Q09428 1581 aa22.62■■□□□ 1.21
EIF4A1-205ENST00000577738 BIVM-ERCC5R4GMW8 1640 aa22.57■■□□□ 1.2
EIF4A1-205ENST00000577738 SYNJ1O43426 1573 aa22.55■■□□□ 1.2
EIF4A1-205ENST00000577738 TOP2BQ02880 1626 aa22.5■■□□□ 1.19
EIF4A1-205ENST00000577738 POLA1P09884 1462 aaPredicted RBP22.47■■□□□ 1.19
EIF4A1-205ENST00000577738 TARBP1Q13395 1621 aaKnown RBP22.46■■□□□ 1.19
EIF4A1-205ENST00000577738 WRNQ14191 1432 aaPredicted RBP eCLIP22.46■■□□□ 1.193e-6■□□□□ 9.1
EIF4A1-205ENST00000577738 FGD5Q6ZNL6 1462 aa22.45■■□□□ 1.18
EIF4A1-205ENST00000577738 WDR97A6NE52 1622 aa22.45■■□□□ 1.18
EIF4A1-205ENST00000577738 IFT140Q96RY7 1462 aa22.35■■□□□ 1.17
EIF4A1-205ENST00000577738 RAD54L2Q9Y4B4 1467 aa22.34■■□□□ 1.17
EIF4A1-205ENST00000577738 EIF4G3O43432 1585 aaKnown RBP22.32■■□□□ 1.16
EIF4A1-205ENST00000577738 ZNF608Q9ULD9 1512 aaPredicted RBP22.31■■□□□ 1.16
EIF4A1-205ENST00000577738 SOGA1O94964 1423 aa22.26■■□□□ 1.15
EIF4A1-205ENST00000577738 ABCA5Q8WWZ7 1642 aa22.24■■□□□ 1.15
EIF4A1-205ENST00000577738 ABCA10Q8WWZ4 1543 aa22.23■■□□□ 1.15
EIF4A1-205ENST00000577738 PBRM1Q86U86 1689 aa22.2■■□□□ 1.15
EIF4A1-205ENST00000577738 AQRO60306 1485 aaKnown RBP eCLIP22.15■■□□□ 1.145e-7■■■□□ 17.9
EIF4A1-205ENST00000577738 TDRD9Q8NDG6 1382 aaKnown RBP22.12■■□□□ 1.13
EIF4A1-205ENST00000577738 GAPVD1Q14C86 1478 aa22.07■■□□□ 1.12
EIF4A1-205ENST00000577738 CHD1O14646 1710 aa22.03■■□□□ 1.12
EIF4A1-205ENST00000577738 GRIN2BQ13224 1484 aa22.02■■□□□ 1.12
EIF4A1-205ENST00000577738 SNAPC4Q5SXM2 1469 aa22■■□□□ 1.11
EIF4A1-205ENST00000577738 ADAMTS12P58397 1594 aa21.99■■□□□ 1.11
EIF4A1-205ENST00000577738 CHIC1Q5VXU3 224 aa21.98■■□□□ 1.11
EIF4A1-205ENST00000577738 ERICH3Q5RHP9 1530 aa21.97■■□□□ 1.11
EIF4A1-205ENST00000577738 TRIM41Q8WV44 630 aa21.96■■□□□ 1.11
EIF4A1-205ENST00000577738 RUSC2Q8N2Y8 1516 aa21.96■■□□□ 1.11
EIF4A1-205ENST00000577738 MAGI1Q96QZ7 1491 aaPredicted RBP21.95■■□□□ 1.1
EIF4A1-205ENST00000577738 KIF27Q86VH2 1401 aa21.92■■□□□ 1.1
EIF4A1-205ENST00000577738 CUL7Q14999 1698 aa21.89■■□□□ 1.1
EIF4A1-205ENST00000577738 SYNJ2O15056 1496 aa21.86■■□□□ 1.09
EIF4A1-205ENST00000577738 IGF1RP08069 1367 aa21.82■■□□□ 1.08
EIF4A1-205ENST00000577738 FHAD1B1AJZ9 1412 aa21.8■■□□□ 1.08
EIF4A1-205ENST00000577738 GRIN2AQ12879 1464 aa21.78■■□□□ 1.08
EIF4A1-205ENST00000577738 CEP170Q5SW79 1584 aa21.75■■□□□ 1.07
EIF4A1-205ENST00000577738 CLASP1Q7Z460 1538 aa21.73■■□□□ 1.07
EIF4A1-205ENST00000577738 EEA1Q15075 1411 aa21.69■■□□□ 1.06
EIF4A1-205ENST00000577738 NUP160Q12769 1436 aa21.68■■□□□ 1.06
EIF4A1-205ENST00000577738 PRXQ9BXM0 1461 aa21.67■■□□□ 1.06
EIF4A1-205ENST00000577738 CARMIL1Q5VZK9 1371 aa21.66■■□□□ 1.06
EIF4A1-205ENST00000577738 FBLN2P98095 1184 aa21.64■■□□□ 1.05
EIF4A1-205ENST00000577738 CHMP7Q8WUX9 453 aaPredicted RBP21.64■■□□□ 1.05
EIF4A1-205ENST00000577738 RAPGEF2Q9Y4G8 1499 aa21.62■■□□□ 1.05
EIF4A1-205ENST00000577738 CTTNBP2Q8WZ74 1663 aa21.62■■□□□ 1.05
EIF4A1-205ENST00000577738 KIF21BO75037 1637 aa21.62■■□□□ 1.05
EIF4A1-205ENST00000577738 OSCARQ8IYS5 282 aa21.6■■□□□ 1.05
EIF4A1-205ENST00000577738 SHROOM2Q13796 1616 aa21.59■■□□□ 1.05
EIF4A1-205ENST00000577738 FAM9AQ8IZU1 332 aaPredicted RBP21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms