RNA–Protein interactions for RNA: ENST00000624145.3

ANKRD28-215, Transcript of ankyrin repeat domain 28, humanhuman

TSL 2 BASIC

Gene ANKRD28, Length 6,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD28-215ENST00000624145 DCAF8L2P0C7V8 631 aa6.74□□□□□ -1.33
ANKRD28-215ENST00000624145 PELP1Q8IZL8 1130 aaKnown RBP6.67□□□□□ -1.34
ANKRD28-215ENST00000624145 ERICH6Q7L0X2 663 aa6.41□□□□□ -1.38
ANKRD28-215ENST00000624145 CCER1Q8TC90 406 aaPredicted RBP6.36□□□□□ -1.39
ANKRD28-215ENST00000624145 APLP2Q06481 763 aa6.33□□□□□ -1.4
ANKRD28-215ENST00000624145 SUPT5HO00267 1087 aaKnown RBP6.32□□□□□ -1.4
ANKRD28-215ENST00000624145 FAM9AQ8IZU1 332 aaPredicted RBP6.32□□□□□ -1.4
ANKRD28-215ENST00000624145 EHMT2Q96KQ7 1210 aa6.28□□□□□ -1.4
ANKRD28-215ENST00000624145 MYT1Q01538 1121 aa6.25□□□□□ -1.41
ANKRD28-215ENST00000624145 CENPBP07199 599 aaPredicted RBP6.19□□□□□ -1.42
ANKRD28-215ENST00000624145 NEFLP07196 543 aa6.15□□□□□ -1.43
ANKRD28-215ENST00000624145 TTBK1Q5TCY1 1321 aaPredicted RBP6.1□□□□□ -1.43
ANKRD28-215ENST00000624145 DAXXQ9UER7 740 aaPredicted RBP6.09□□□□□ -1.43
ANKRD28-215ENST00000624145 SHROOM4Q9ULL8 1493 aa6.08□□□□□ -1.44
ANKRD28-215ENST00000624145 YTHDC1Q96MU7 727 aaKnown RBP6.07□□□□□ -1.44
ANKRD28-215ENST00000624145 PCGF6Q9BYE7 350 aa6.06□□□□□ -1.44
ANKRD28-215ENST00000624145 ATP1B4Q9UN42 357 aaPredicted RBP6.05□□□□□ -1.44
ANKRD28-215ENST00000624145 ZEB1P37275 1124 aaPredicted RBP6.03□□□□□ -1.44
ANKRD28-215ENST00000624145 RANGAP1P46060 587 aaPredicted RBP6.01□□□□□ -1.45
ANKRD28-215ENST00000624145 MYT1LQ9UL68 1186 aa5.93□□□□□ -1.46
ANKRD28-215ENST00000624145 ZNF316A6NFI3 1004 aaPredicted RBP5.92□□□□□ -1.46
ANKRD28-215ENST00000624145 RTL5Q5HYW3 569 aaPredicted RBP5.9□□□□□ -1.46
ANKRD28-215ENST00000624145 POLR3GLQ9BT43 218 aa5.9□□□□□ -1.47
ANKRD28-215ENST00000624145 UBTFP17480 764 aaKnown RBP5.88□□□□□ -1.47
ANKRD28-215ENST00000624145 CLSPNQ9HAW4 1339 aa5.88□□□□□ -1.47
ANKRD28-215ENST00000624145 SLC4A1APQ9BWU0 796 aaKnown RBP5.85□□□□□ -1.47
ANKRD28-215ENST00000624145 TRIM41Q8WV44 630 aa5.85□□□□□ -1.47
ANKRD28-215ENST00000624145 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.81□□□□□ -1.48
ANKRD28-215ENST00000624145 HNRNPUL2Q1KMD3 747 aaKnown RBP5.81□□□□□ -1.48
ANKRD28-215ENST00000624145 CHIC1Q5VXU3 224 aa5.81□□□□□ -1.48
ANKRD28-215ENST00000624145 CNGB1Q14028 1251 aaPredicted RBP5.8□□□□□ -1.48
ANKRD28-215ENST00000624145 ZBTB47Q9UFB7 747 aaPredicted RBP5.79□□□□□ -1.48
ANKRD28-215ENST00000624145 ITGAEP38570 1179 aa5.75□□□□□ -1.49
ANKRD28-215ENST00000624145 NISCHQ9Y2I1 1504 aa5.73□□□□□ -1.49
ANKRD28-215ENST00000624145 SLC24A1O60721 1099 aa5.71□□□□□ -1.5
ANKRD28-215ENST00000624145 PPARGC1BQ86YN6 1023 aaKnown RBP5.71□□□□□ -1.5
ANKRD28-215ENST00000624145 CANXP27824 592 aaKnown RBP5.67□□□□□ -1.5
ANKRD28-215ENST00000624145 TRIM26Q12899 539 aaPredicted RBP5.67□□□□□ -1.5
ANKRD28-215ENST00000624145 BCL11AQ9H165 835 aa5.66□□□□□ -1.5
ANKRD28-215ENST00000624145 NEFMP07197 916 aa5.66□□□□□ -1.5
ANKRD28-215ENST00000624145 ANP32BQ92688 251 aaKnown RBP5.66□□□□□ -1.5
ANKRD28-215ENST00000624145 HRCP23327 699 aa5.65□□□□□ -1.5
ANKRD28-215ENST00000624145 CDK11AQ9UQ88 783 aaPredicted RBP5.65□□□□□ -1.51
ANKRD28-215ENST00000624145 GLIPR1L2Q4G1C9 344 aa5.62□□□□□ -1.51
ANKRD28-215ENST00000624145 TRIM52Q96A61 297 aa5.61□□□□□ -1.51
ANKRD28-215ENST00000624145 CDK11BP21127 795 aaKnown RBP5.61□□□□□ -1.51
ANKRD28-215ENST00000624145 BCANQ96GW7 911 aa5.6□□□□□ -1.51
ANKRD28-215ENST00000624145 EIF5BO60841 1220 aaKnown RBP5.6□□□□□ -1.51
ANKRD28-215ENST00000624145 ANP32AP39687 249 aaKnown RBP5.6□□□□□ -1.51
ANKRD28-215ENST00000624145 HSP90AA1P07900 732 aaKnown RBP5.59□□□□□ -1.52
ANKRD28-215ENST00000624145 ANP32CO43423 234 aa5.58□□□□□ -1.52
ANKRD28-215ENST00000624145 FAM50AQ14320 339 aaKnown RBP5.58□□□□□ -1.52
ANKRD28-215ENST00000624145 ZNF326Q5BKZ1 582 aaKnown RBP5.58□□□□□ -1.52
ANKRD28-215ENST00000624145 DIEXFQ68CQ4 756 aaKnown RBP5.58□□□□□ -1.52
ANKRD28-215ENST00000624145 NEUROD1Q13562 356 aa5.55□□□□□ -1.52
ANKRD28-215ENST00000624145 NPM2Q86SE8 214 aaKnown RBP5.54□□□□□ -1.52
ANKRD28-215ENST00000624145 UPF2Q9HAU5 1272 aaKnown RBP5.54□□□□□ -1.52
ANKRD28-215ENST00000624145 ESF1Q9H501 851 aaKnown RBP5.49□□□□□ -1.53
ANKRD28-215ENST00000624145 GTF3C3Q9Y5Q9 886 aa5.48□□□□□ -1.53
ANKRD28-215ENST00000624145 STAG3Q9UJ98 1225 aa5.45□□□□□ -1.54
ANKRD28-215ENST00000624145 TNNT2P45379 298 aaPredicted RBP5.45□□□□□ -1.54
ANKRD28-215ENST00000624145 ARXQ96QS3 562 aa5.45□□□□□ -1.54
ANKRD28-215ENST00000624145 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.44□□□□□ -1.54
ANKRD28-215ENST00000624145 NCLP19338 710 aaKnown RBP5.43□□□□□ -1.54
ANKRD28-215ENST00000624145 FBLN2P98095 1184 aa5.43□□□□□ -1.54
ANKRD28-215ENST00000624145 A0A0G2JS52 829 aa5.43□□□□□ -1.54
ANKRD28-215ENST00000624145 LOC105371045A0A1W2PR82 267 aa5.42□□□□□ -1.54
ANKRD28-215ENST00000624145 MYH16Q9H6N6 1097 aa5.42□□□□□ -1.54
ANKRD28-215ENST00000624145 ZRSR1Q15695 479 aaKnown RBP5.41□□□□□ -1.54
ANKRD28-215ENST00000624145 SCAF1Q9H7N4 1312 aaKnown RBP5.41□□□□□ -1.54
ANKRD28-215ENST00000624145 CHGAP10645 457 aaKnown RBP5.41□□□□□ -1.54
ANKRD28-215ENST00000624145 TRIM44Q96DX7 344 aaPredicted RBP5.41□□□□□ -1.54
ANKRD28-215ENST00000624145 PLPPR3Q6T4P5 718 aa5.4□□□□□ -1.54
ANKRD28-215ENST00000624145 TULP1O00294 542 aaPredicted RBP5.4□□□□□ -1.54
ANKRD28-215ENST00000624145 NBR1Q14596 966 aa5.39□□□□□ -1.55
ANKRD28-215ENST00000624145 GOLGA6L22H0YM25 854 aa5.38□□□□□ -1.55
ANKRD28-215ENST00000624145 ANP32EQ9BTT0 268 aa5.38□□□□□ -1.55
ANKRD28-215ENST00000624145 ZNF777Q9ULD5 760 aaPredicted RBP5.38□□□□□ -1.55
ANKRD28-215ENST00000624145 PTMAP06454 111 aaKnown RBP5.38□□□□□ -1.55
ANKRD28-215ENST00000624145 FKBP8Q14318 412 aa5.38□□□□□ -1.55
ANKRD28-215ENST00000624145 CCDC136Q96JN2 1154 aa5.37□□□□□ -1.55
ANKRD28-215ENST00000624145 WDR43Q15061 677 aaKnown RBP eCLIP5.37□□□□□ -1.55
ANKRD28-215ENST00000624145 BECN1Q14457 450 aa5.36□□□□□ -1.55
ANKRD28-215ENST00000624145 DNTTIP2Q5QJE6 756 aaKnown RBP5.36□□□□□ -1.55
ANKRD28-215ENST00000624145 HNRNPUQ00839 825 aaKnown RBP eCLIP5.35□□□□□ -1.55
ANKRD28-215ENST00000624145 GOLGA6L6A8MZA4 724 aa5.35□□□□□ -1.55
ANKRD28-215ENST00000624145 ARID3CA6NKF2 412 aa5.35□□□□□ -1.55
ANKRD28-215ENST00000624145 NCBP3Q53F19 620 aaKnown RBP5.35□□□□□ -1.55
ANKRD28-215ENST00000624145 SALL2Q9Y467 1007 aaPredicted RBP5.35□□□□□ -1.55
ANKRD28-215ENST00000624145 ZBTB7CA1YPR0 619 aa5.34□□□□□ -1.55
ANKRD28-215ENST00000624145 FAM9BQ8IZU0 186 aa5.34□□□□□ -1.55
ANKRD28-215ENST00000624145 DDRGK1Q96HY6 314 aa5.34□□□□□ -1.55
ANKRD28-215ENST00000624145 ACIN1Q9UKV3 1341 aaKnown RBP5.34□□□□□ -1.55
ANKRD28-215ENST00000624145 CASC1Q6TDU7 716 aa5.33□□□□□ -1.56
ANKRD28-215ENST00000624145 TONSLQ96HA7 1378 aa5.33□□□□□ -1.56
ANKRD28-215ENST00000624145 TMC1Q8TDI8 760 aa5.33□□□□□ -1.56
ANKRD28-215ENST00000624145 NPM1P06748 294 aaKnown RBP eCLIP5.32□□□□□ -1.56
ANKRD28-215ENST00000624145 NRDCO43847 1150 aa5.32□□□□□ -1.56
ANKRD28-215ENST00000624145 CLSTN1O94985 981 aa5.32□□□□□ -1.56
ANKRD28-215ENST00000624145 C14orf37Q86TY3 774 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms