RNA–Protein interactions for RNA: ENST00000403491.7

NFIA-207, Transcript of nuclear factor I A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NFIA, Length 9,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIA-207ENST00000403491 DCAF8L2P0C7V8 631 aa19.91■□□□□ 0.78
NFIA-207ENST00000403491 SUPT5HO00267 1087 aaKnown RBP18.51■□□□□ 0.55
NFIA-207ENST00000403491 EHMT2Q96KQ7 1210 aa18.46■□□□□ 0.55
NFIA-207ENST00000403491 SHROOM4Q9ULL8 1493 aa18.07■□□□□ 0.48
NFIA-207ENST00000403491 PELP1Q8IZL8 1130 aaKnown RBP17.87■□□□□ 0.45
NFIA-207ENST00000403491 APLP2Q06481 763 aa17.86■□□□□ 0.45
NFIA-207ENST00000403491 TTBK1Q5TCY1 1321 aaPredicted RBP17.77■□□□□ 0.44
NFIA-207ENST00000403491 FAM9AQ8IZU1 332 aaPredicted RBP17.7■□□□□ 0.42
NFIA-207ENST00000403491 RANGAP1P46060 587 aaPredicted RBP17.61■□□□□ 0.41
NFIA-207ENST00000403491 ATP1B4Q9UN42 357 aaPredicted RBP17.52■□□□□ 0.4
NFIA-207ENST00000403491 PCGF6Q9BYE7 350 aa17.4■□□□□ 0.38
NFIA-207ENST00000403491 ERICH6Q7L0X2 663 aa17.33■□□□□ 0.36
NFIA-207ENST00000403491 NISCHQ9Y2I1 1504 aa17.29■□□□□ 0.36
NFIA-207ENST00000403491 CCER1Q8TC90 406 aaPredicted RBP17.12■□□□□ 0.33
NFIA-207ENST00000403491 UBTFP17480 764 aaKnown RBP17.06■□□□□ 0.32
NFIA-207ENST00000403491 MYT1LQ9UL68 1186 aa17.01■□□□□ 0.31
NFIA-207ENST00000403491 CENPBP07199 599 aaPredicted RBP17■□□□□ 0.31
NFIA-207ENST00000403491 TRIM41Q8WV44 630 aa16.99■□□□□ 0.31
NFIA-207ENST00000403491 YTHDC1Q96MU7 727 aaKnown RBP16.91■□□□□ 0.3
NFIA-207ENST00000403491 NEFLP07196 543 aa16.9■□□□□ 0.3
NFIA-207ENST00000403491 CHIC1Q5VXU3 224 aa16.87■□□□□ 0.29
NFIA-207ENST00000403491 PPARGC1BQ86YN6 1023 aaKnown RBP16.86■□□□□ 0.29
NFIA-207ENST00000403491 POLR3GLQ9BT43 218 aa16.84■□□□□ 0.29
NFIA-207ENST00000403491 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.81■□□□□ 0.28
NFIA-207ENST00000403491 HNRNPUL2Q1KMD3 747 aaKnown RBP16.81■□□□□ 0.28
NFIA-207ENST00000403491 CNGB1Q14028 1251 aaPredicted RBP16.79■□□□□ 0.28
NFIA-207ENST00000403491 ITGAEP38570 1179 aa16.73■□□□□ 0.27
NFIA-207ENST00000403491 ZEB1P37275 1124 aaPredicted RBP16.72■□□□□ 0.27
NFIA-207ENST00000403491 MYT1Q01538 1121 aa16.68■□□□□ 0.26
NFIA-207ENST00000403491 SLC4A1APQ9BWU0 796 aaKnown RBP16.67■□□□□ 0.26
NFIA-207ENST00000403491 DAXXQ9UER7 740 aaPredicted RBP16.65■□□□□ 0.26
NFIA-207ENST00000403491 CLSPNQ9HAW4 1339 aa16.34■□□□□ 0.21
NFIA-207ENST00000403491 SLC24A1O60721 1099 aa16.23■□□□□ 0.19
NFIA-207ENST00000403491 BCL11AQ9H165 835 aa16.21■□□□□ 0.18
NFIA-207ENST00000403491 TRIM26Q12899 539 aaPredicted RBP16.2■□□□□ 0.18
NFIA-207ENST00000403491 ZNF316A6NFI3 1004 aaPredicted RBP16.19■□□□□ 0.18
NFIA-207ENST00000403491 LOC105371045A0A1W2PR82 267 aa16.17■□□□□ 0.18
NFIA-207ENST00000403491 FAM50AQ14320 339 aaKnown RBP16.13■□□□□ 0.17
NFIA-207ENST00000403491 TRIM52Q96A61 297 aa16.1■□□□□ 0.17
NFIA-207ENST00000403491 HRCP23327 699 aa16.08■□□□□ 0.16
NFIA-207ENST00000403491 BCANQ96GW7 911 aa16.08■□□□□ 0.16
NFIA-207ENST00000403491 FBLN2P98095 1184 aa16.05■□□□□ 0.16
NFIA-207ENST00000403491 ZNF326Q5BKZ1 582 aaKnown RBP16.03■□□□□ 0.16
NFIA-207ENST00000403491 NEUROD1Q13562 356 aa16.03■□□□□ 0.16
NFIA-207ENST00000403491 RTL5Q5HYW3 569 aaPredicted RBP16.02■□□□□ 0.16
NFIA-207ENST00000403491 ZBTB47Q9UFB7 747 aaPredicted RBP16.01■□□□□ 0.15
NFIA-207ENST00000403491 PLPPR3Q6T4P5 718 aa15.92■□□□□ 0.14
NFIA-207ENST00000403491 PABPN1Q86U42 306 aaKnown RBP eCLIP15.88■□□□□ 0.13
NFIA-207ENST00000403491 DIEXFQ68CQ4 756 aaKnown RBP15.86■□□□□ 0.13
NFIA-207ENST00000403491 ARID3CA6NKF2 412 aa15.83■□□□□ 0.13
NFIA-207ENST00000403491 CANXP27824 592 aaKnown RBP15.83■□□□□ 0.12
NFIA-207ENST00000403491 NEFMP07197 916 aa15.81■□□□□ 0.12
NFIA-207ENST00000403491 ANP32CO43423 234 aa15.73■□□□□ 0.11
NFIA-207ENST00000403491 ESF1Q9H501 851 aaKnown RBP15.71■□□□□ 0.11
NFIA-207ENST00000403491 P3H3Q8IVL6 736 aa15.7■□□□□ 0.1
NFIA-207ENST00000403491 ZNF777Q9ULD5 760 aaPredicted RBP15.67■□□□□ 0.1
NFIA-207ENST00000403491 CDK11AQ9UQ88 783 aaPredicted RBP15.65■□□□□ 0.1
NFIA-207ENST00000403491 STAG3Q9UJ98 1225 aa15.64■□□□□ 0.09
NFIA-207ENST00000403491 CHGAP10645 457 aaKnown RBP15.64■□□□□ 0.09
NFIA-207ENST00000403491 ABCC9O60706 1549 aa15.62■□□□□ 0.09
NFIA-207ENST00000403491 A0A0G2JS52 829 aa15.57■□□□□ 0.08
NFIA-207ENST00000403491 SCAF1Q9H7N4 1312 aaKnown RBP15.55■□□□□ 0.08
NFIA-207ENST00000403491 NPM2Q86SE8 214 aaKnown RBP15.54■□□□□ 0.08
NFIA-207ENST00000403491 PLEKHG5O94827 1062 aa15.52■□□□□ 0.07
NFIA-207ENST00000403491 HSP90AA1P07900 732 aaKnown RBP15.51■□□□□ 0.07
NFIA-207ENST00000403491 GTF3C3Q9Y5Q9 886 aa15.5■□□□□ 0.07
NFIA-207ENST00000403491 SALL2Q9Y467 1007 aaPredicted RBP15.49■□□□□ 0.07
NFIA-207ENST00000403491 SENP3Q9H4L4 574 aaPredicted RBP15.45■□□□□ 0.06
NFIA-207ENST00000403491 NPM1P06748 294 aaKnown RBP eCLIP15.43■□□□□ 0.06
NFIA-207ENST00000403491 ANP32AP39687 249 aaKnown RBP15.41■□□□□ 0.06
NFIA-207ENST00000403491 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.39■□□□□ 0.058e-10■■■□□ 18.4
NFIA-207ENST00000403491 ANP32BQ92688 251 aaKnown RBP15.37■□□□□ 0.05
NFIA-207ENST00000403491 ZBTB7CA1YPR0 619 aa15.33■□□□□ 0.05
NFIA-207ENST00000403491 EIF5BO60841 1220 aaKnown RBP15.32■□□□□ 0.04
NFIA-207ENST00000403491 FAM9BQ8IZU0 186 aa15.31■□□□□ 0.04
NFIA-207ENST00000403491 ARXQ96QS3 562 aa15.31■□□□□ 0.04
NFIA-207ENST00000403491 UPF2Q9HAU5 1272 aaKnown RBP15.31■□□□□ 0.04
NFIA-207ENST00000403491 C14orf37Q86TY3 774 aa15.29■□□□□ 0.04
NFIA-207ENST00000403491 KDM2AQ9Y2K7 1162 aa15.26■□□□□ 0.03
NFIA-207ENST00000403491 HNRNPUQ00839 825 aaKnown RBP eCLIP15.24■□□□□ 0.036e-6■□□□□ 8.3
NFIA-207ENST00000403491 CHIC2Q9UKJ5 165 aa15.24■□□□□ 0.03
NFIA-207ENST00000403491 TMC1Q8TDI8 760 aa15.22■□□□□ 0.03
NFIA-207ENST00000403491 TONSLQ96HA7 1378 aa15.21■□□□□ 0.03
NFIA-207ENST00000403491 FKBP8Q14318 412 aa15.21■□□□□ 0.03
NFIA-207ENST00000403491 CDK11BP21127 795 aaKnown RBP15.2■□□□□ 0.02
NFIA-207ENST00000403491 DDX10Q13206 875 aaKnown RBP15.2■□□□□ 0.02
NFIA-207ENST00000403491 TULP1O00294 542 aaPredicted RBP15.19■□□□□ 0.02
NFIA-207ENST00000403491 HAP1P54257 671 aaPredicted RBP15.17■□□□□ 0.02
NFIA-207ENST00000403491 WDR43Q15061 677 aaKnown RBP eCLIP15.16■□□□□ 0.02
NFIA-207ENST00000403491 CSRNP3Q8WYN3 585 aa15.16■□□□□ 0.02
NFIA-207ENST00000403491 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.15■□□□□ 0.02
NFIA-207ENST00000403491 NBR1Q14596 966 aa15.12■□□□□ 0.01
NFIA-207ENST00000403491 CCDC136Q96JN2 1154 aa15.1■□□□□ 0.01
NFIA-207ENST00000403491 TSPY4P0CV99 314 aa15.1■□□□□ 0.01
NFIA-207ENST00000403491 TSPY10P0CW01 314 aa15.1■□□□□ 0.01
NFIA-207ENST00000403491 PPP1R15AO75807 674 aaPredicted RBP15.09■□□□□ 0.01
NFIA-207ENST00000403491 ARID4BQ4LE39 1312 aaPredicted RBP15.08■□□□□ 0
NFIA-207ENST00000403491 MYH16Q9H6N6 1097 aa15.08■□□□□ 0
NFIA-207ENST00000403491 KCNH8Q96L42 1107 aa15.07■□□□□ 0
NFIA-207ENST00000403491 HIRIP3Q9BW71 556 aaPredicted RBP15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms