RNA–Protein interactions for RNA: ENST00000371185.6

NFIA-203, Transcript of nuclear factor I A, humanhuman

TSL 5 BASIC

Gene NFIA, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIA-203ENST00000371185 NISCHQ9Y2I1 1504 aa24.66■■□□□ 1.54
NFIA-203ENST00000371185 CCDC180Q9P1Z9 1646 aa21.77■■□□□ 1.08
NFIA-203ENST00000371185 ABCC9O60706 1549 aa21.11■□□□□ 0.97
NFIA-203ENST00000371185 ZCCHC6Q5VYS8 1495 aaKnown RBP20.62■□□□□ 0.89
NFIA-203ENST00000371185 DCAF8L2P0C7V8 631 aa20.49■□□□□ 0.87
NFIA-203ENST00000371185 NACADO15069 1562 aa20.38■□□□□ 0.85
NFIA-203ENST00000371185 DCAF1Q9Y4B6 1507 aa20.36■□□□□ 0.85
NFIA-203ENST00000371185 RB1CC1Q8TDY2 1594 aa20.34■□□□□ 0.85
NFIA-203ENST00000371185 MYO15BQ96JP2 1530 aa20.32■□□□□ 0.84
NFIA-203ENST00000371185 UNC13AQ9UPW8 1703 aa20.01■□□□□ 0.79
NFIA-203ENST00000371185 SCRIBQ14160 1630 aa19.98■□□□□ 0.79
NFIA-203ENST00000371185 BICRAQ9NZM4 1560 aa19.82■□□□□ 0.76
NFIA-203ENST00000371185 PABPN1Q86U42 306 aaKnown RBP eCLIP19.78■□□□□ 0.76
NFIA-203ENST00000371185 SHROOM4Q9ULL8 1493 aa19.74■□□□□ 0.75
NFIA-203ENST00000371185 CECR2Q9BXF3 1484 aa19.25■□□□□ 0.67
NFIA-203ENST00000371185 EIF4G1Q04637 1599 aaKnown RBP19.23■□□□□ 0.67
NFIA-203ENST00000371185 DNAJC5BQ9UF47 199 aa19.17■□□□□ 0.66
NFIA-203ENST00000371185 SMARCA4P51532 1647 aa19.1■□□□□ 0.65
NFIA-203ENST00000371185 CC2D2AQ9P2K1 1620 aa19.1■□□□□ 0.65
NFIA-203ENST00000371185 MROH2BQ7Z745 1585 aa19.06■□□□□ 0.64
NFIA-203ENST00000371185 BAZ1AQ9NRL2 1556 aaPredicted RBP19.06■□□□□ 0.64
NFIA-203ENST00000371185 RSF1Q96T23 1441 aaPredicted RBP18.91■□□□□ 0.62
NFIA-203ENST00000371185 ATAD2BQ9ULI0 1458 aa18.91■□□□□ 0.62
NFIA-203ENST00000371185 WIZO95785 1651 aa18.89■□□□□ 0.61
NFIA-203ENST00000371185 PEG3Q9GZU2 1588 aa18.88■□□□□ 0.61
NFIA-203ENST00000371185 SMARCA2P51531 1590 aa18.85■□□□□ 0.61
NFIA-203ENST00000371185 NCAPD3P42695 1498 aa18.82■□□□□ 0.6
NFIA-203ENST00000371185 HMGXB3Q12766 1538 aa18.76■□□□□ 0.59
NFIA-203ENST00000371185 BAZ1BQ9UIG0 1483 aaKnown RBP18.75■□□□□ 0.59
NFIA-203ENST00000371185 SUPT5HO00267 1087 aaKnown RBP18.66■□□□□ 0.58
NFIA-203ENST00000371185 TOP2AP11388 1531 aaKnown RBP18.64■□□□□ 0.58
NFIA-203ENST00000371185 CCDC88BA6NC98 1476 aa18.45■□□□□ 0.54
NFIA-203ENST00000371185 NESP48681 1621 aa18.39■□□□□ 0.53
NFIA-203ENST00000371185 CADPSQ9ULU8 1353 aa18.29■□□□□ 0.52
NFIA-203ENST00000371185 LAMC3Q9Y6N6 1575 aa18.27■□□□□ 0.51
NFIA-203ENST00000371185 CFTRP13569 1480 aa18.25■□□□□ 0.51
NFIA-203ENST00000371185 KIF21AQ7Z4S6 1674 aa18.17■□□□□ 0.5
NFIA-203ENST00000371185 PRDM2Q13029 1718 aa18.16■□□□□ 0.5
NFIA-203ENST00000371185 PDS5BQ9NTI5 1447 aa18.11■□□□□ 0.49
NFIA-203ENST00000371185 ERCC6Q03468 1493 aa18.11■□□□□ 0.49
NFIA-203ENST00000371185 FANCD2Q9BXW9 1451 aa18.1■□□□□ 0.49
NFIA-203ENST00000371185 CEP164Q9UPV0 1460 aa18.03■□□□□ 0.48
NFIA-203ENST00000371185 THOC2Q8NI27 1593 aaKnown RBP18.02■□□□□ 0.47
NFIA-203ENST00000371185 MRC2Q9UBG0 1479 aa17.95■□□□□ 0.46
NFIA-203ENST00000371185 URB2Q14146 1524 aaKnown RBP17.95■□□□□ 0.46
NFIA-203ENST00000371185 ABCC8Q09428 1581 aa17.91■□□□□ 0.46
NFIA-203ENST00000371185 WDR62O43379 1518 aa17.91■□□□□ 0.46
NFIA-203ENST00000371185 CUX1P39880 1505 aa17.86■□□□□ 0.45
NFIA-203ENST00000371185 TOPBP1Q92547 1522 aa17.86■□□□□ 0.45
NFIA-203ENST00000371185 DNMBPQ6XZF7 1577 aa17.84■□□□□ 0.45
NFIA-203ENST00000371185 SYNJ1O43426 1573 aa17.82■□□□□ 0.44
NFIA-203ENST00000371185 WRNQ14191 1432 aaPredicted RBP eCLIP17.8■□□□□ 0.44
NFIA-203ENST00000371185 CUX2O14529 1486 aa17.78■□□□□ 0.44
NFIA-203ENST00000371185 TOP2BQ02880 1626 aa17.75■□□□□ 0.43
NFIA-203ENST00000371185 BIVM-ERCC5R4GMW8 1640 aa17.75■□□□□ 0.43
NFIA-203ENST00000371185 POLA1P09884 1462 aaPredicted RBP17.74■□□□□ 0.43
NFIA-203ENST00000371185 FGD5Q6ZNL6 1462 aa17.74■□□□□ 0.43
NFIA-203ENST00000371185 RAD54L2Q9Y4B4 1467 aa17.69■□□□□ 0.42
NFIA-203ENST00000371185 TARBP1Q13395 1621 aaKnown RBP17.66■□□□□ 0.42
NFIA-203ENST00000371185 IFT140Q96RY7 1462 aa17.63■□□□□ 0.41
NFIA-203ENST00000371185 SOGA1O94964 1423 aa17.62■□□□□ 0.41
NFIA-203ENST00000371185 ZNF608Q9ULD9 1512 aaPredicted RBP17.62■□□□□ 0.41
NFIA-203ENST00000371185 WDR97A6NE52 1622 aa17.6■□□□□ 0.41
NFIA-203ENST00000371185 CHIC1Q5VXU3 224 aa17.57■□□□□ 0.4
NFIA-203ENST00000371185 TRIM41Q8WV44 630 aa17.55■□□□□ 0.4
NFIA-203ENST00000371185 ABCA10Q8WWZ4 1543 aa17.54■□□□□ 0.4
NFIA-203ENST00000371185 EIF4G3O43432 1585 aaKnown RBP17.54■□□□□ 0.4
NFIA-203ENST00000371185 TDRD9Q8NDG6 1382 aaKnown RBP17.54■□□□□ 0.4
NFIA-203ENST00000371185 AQRO60306 1485 aaKnown RBP eCLIP17.53■□□□□ 0.41e-7■■□□□ 12.1
NFIA-203ENST00000371185 ABCA5Q8WWZ7 1642 aa17.49■□□□□ 0.39
NFIA-203ENST00000371185 GAPVD1Q14C86 1478 aa17.44■□□□□ 0.38
NFIA-203ENST00000371185 RUSC2Q8N2Y8 1516 aa17.43■□□□□ 0.38
NFIA-203ENST00000371185 PBRM1Q86U86 1689 aa17.42■□□□□ 0.38
NFIA-203ENST00000371185 GRIN2BQ13224 1484 aa17.37■□□□□ 0.37
NFIA-203ENST00000371185 KIF27Q86VH2 1401 aa17.37■□□□□ 0.37
NFIA-203ENST00000371185 SNAPC4Q5SXM2 1469 aa17.37■□□□□ 0.37
NFIA-203ENST00000371185 ERICH3Q5RHP9 1530 aa17.32■□□□□ 0.36
NFIA-203ENST00000371185 IGF1RP08069 1367 aa17.31■□□□□ 0.36
NFIA-203ENST00000371185 ADAMTS12P58397 1594 aa17.3■□□□□ 0.36
NFIA-203ENST00000371185 MAGI1Q96QZ7 1491 aaPredicted RBP17.3■□□□□ 0.36
NFIA-203ENST00000371185 CHD1O14646 1710 aa17.28■□□□□ 0.36
NFIA-203ENST00000371185 FAM9AQ8IZU1 332 aaPredicted RBP17.26■□□□□ 0.35
NFIA-203ENST00000371185 SYNJ2O15056 1496 aa17.24■□□□□ 0.35
NFIA-203ENST00000371185 CUL7Q14999 1698 aa17.22■□□□□ 0.35
NFIA-203ENST00000371185 FBLN2P98095 1184 aa17.22■□□□□ 0.35
NFIA-203ENST00000371185 FHAD1B1AJZ9 1412 aa17.22■□□□□ 0.35
NFIA-203ENST00000371185 CARMIL1Q5VZK9 1371 aa17.18■□□□□ 0.34
NFIA-203ENST00000371185 GRIN2AQ12879 1464 aa17.18■□□□□ 0.34
NFIA-203ENST00000371185 CHMP7Q8WUX9 453 aaPredicted RBP17.18■□□□□ 0.34
NFIA-203ENST00000371185 EEA1Q15075 1411 aa17.17■□□□□ 0.34
NFIA-203ENST00000371185 CSRNP3Q8WYN3 585 aa17.16■□□□□ 0.34
NFIA-203ENST00000371185 PRXQ9BXM0 1461 aa17.15■□□□□ 0.34
NFIA-203ENST00000371185 CEP170Q5SW79 1584 aa17.14■□□□□ 0.33
NFIA-203ENST00000371185 RAPGEF2Q9Y4G8 1499 aa17.12■□□□□ 0.33
NFIA-203ENST00000371185 NUP160Q12769 1436 aa17.09■□□□□ 0.33
NFIA-203ENST00000371185 OSCARQ8IYS5 282 aa17.09■□□□□ 0.33
NFIA-203ENST00000371185 CLASP1Q7Z460 1538 aa17.07■□□□□ 0.32
NFIA-203ENST00000371185 EHMT2Q96KQ7 1210 aa17.07■□□□□ 0.32
NFIA-203ENST00000371185 KIF21BO75037 1637 aa17.06■□□□□ 0.32
NFIA-203ENST00000371185 HRCP23327 699 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms