RNA–Protein interactions for RNA: ENST00000371187.7

NFIA-204, Transcript of nuclear factor I A, humanhuman

TSL 1 (best) BASIC

Gene NFIA, Length 2,683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIA-204ENST00000371187 NISCHQ9Y2I1 1504 aa13.87□□□□□ -0.19
NFIA-204ENST00000371187 AEBP2Q6ZN18 517 aaPredicted RBP12.79□□□□□ -0.36
NFIA-204ENST00000371187 CHIC1Q5VXU3 224 aa12.65□□□□□ -0.38
NFIA-204ENST00000371187 CCDC180Q9P1Z9 1646 aa12.24□□□□□ -0.45
NFIA-204ENST00000371187 PELP1Q8IZL8 1130 aaKnown RBP11.94□□□□□ -0.5
NFIA-204ENST00000371187 MYT1Q01538 1121 aa11.74□□□□□ -0.53
NFIA-204ENST00000371187 ABCC9O60706 1549 aa11.66□□□□□ -0.54
NFIA-204ENST00000371187 ZCCHC6Q5VYS8 1495 aaKnown RBP11.63□□□□□ -0.55
NFIA-204ENST00000371187 DCAF1Q9Y4B6 1507 aa11.5□□□□□ -0.57
NFIA-204ENST00000371187 DCAF8L2P0C7V8 631 aa11.43□□□□□ -0.58
NFIA-204ENST00000371187 MYO15BQ96JP2 1530 aa11.43□□□□□ -0.58
NFIA-204ENST00000371187 NACADO15069 1562 aa11.41□□□□□ -0.58
NFIA-204ENST00000371187 RB1CC1Q8TDY2 1594 aa11.36□□□□□ -0.59
NFIA-204ENST00000371187 TTBK1Q5TCY1 1321 aaPredicted RBP11.28□□□□□ -0.6
NFIA-204ENST00000371187 SENP3Q9H4L4 574 aaPredicted RBP11.22□□□□□ -0.61
NFIA-204ENST00000371187 HRCP23327 699 aa11.22□□□□□ -0.61
NFIA-204ENST00000371187 PHF23Q9BUL5 403 aaPredicted RBP11.2□□□□□ -0.62
NFIA-204ENST00000371187 SCRIBQ14160 1630 aa11.19□□□□□ -0.62
NFIA-204ENST00000371187 SHROOM4Q9ULL8 1493 aa11.14□□□□□ -0.63
NFIA-204ENST00000371187 UNC13AQ9UPW8 1703 aa11.1□□□□□ -0.63
NFIA-204ENST00000371187 BICRAQ9NZM4 1560 aa11□□□□□ -0.65
NFIA-204ENST00000371187 POTEDQ86YR6 584 aa10.94□□□□□ -0.66
NFIA-204ENST00000371187 SCAF1Q9H7N4 1312 aaKnown RBP10.92□□□□□ -0.66
NFIA-204ENST00000371187 PABPN1Q86U42 306 aaKnown RBP eCLIP10.92□□□□□ -0.66
NFIA-204ENST00000371187 PRKCSHP14314 528 aaPredicted RBP10.83□□□□□ -0.68
NFIA-204ENST00000371187 PPARGC1BQ86YN6 1023 aaKnown RBP10.78□□□□□ -0.68
NFIA-204ENST00000371187 CECR2Q9BXF3 1484 aa10.77□□□□□ -0.69
NFIA-204ENST00000371187 BAZ1AQ9NRL2 1556 aaPredicted RBP10.75□□□□□ -0.69
NFIA-204ENST00000371187 SMARCA4P51532 1647 aa10.72□□□□□ -0.69
NFIA-204ENST00000371187 BCL11AQ9H165 835 aa10.7□□□□□ -0.7
NFIA-204ENST00000371187 MROH2BQ7Z745 1585 aa10.7□□□□□ -0.7
NFIA-204ENST00000371187 EIF4G1Q04637 1599 aaKnown RBP10.68□□□□□ -0.7
NFIA-204ENST00000371187 ERICH6Q7L0X2 663 aa10.68□□□□□ -0.7
NFIA-204ENST00000371187 RSF1Q96T23 1441 aaPredicted RBP10.67□□□□□ -0.7
NFIA-204ENST00000371187 DNAJC5BQ9UF47 199 aa10.65□□□□□ -0.7
NFIA-204ENST00000371187 APLP2Q06481 763 aa10.64□□□□□ -0.71
NFIA-204ENST00000371187 SUPT5HO00267 1087 aaKnown RBP10.61□□□□□ -0.71
NFIA-204ENST00000371187 WIZO95785 1651 aa10.61□□□□□ -0.71
NFIA-204ENST00000371187 PEG3Q9GZU2 1588 aa10.6□□□□□ -0.71
NFIA-204ENST00000371187 SMARCA2P51531 1590 aa10.59□□□□□ -0.71
NFIA-204ENST00000371187 CC2D2AQ9P2K1 1620 aa10.57□□□□□ -0.72
NFIA-204ENST00000371187 ATAD2BQ9ULI0 1458 aa10.56□□□□□ -0.72
NFIA-204ENST00000371187 FAM9AQ8IZU1 332 aaPredicted RBP10.56□□□□□ -0.72
NFIA-204ENST00000371187 TOP2AP11388 1531 aaKnown RBP10.52□□□□□ -0.72
NFIA-204ENST00000371187 HMGXB3Q12766 1538 aa10.52□□□□□ -0.73
NFIA-204ENST00000371187 BAZ1BQ9UIG0 1483 aaKnown RBP10.51□□□□□ -0.73
NFIA-204ENST00000371187 PCGF6Q9BYE7 350 aa10.51□□□□□ -0.73
NFIA-204ENST00000371187 NCAPD3P42695 1498 aa10.51□□□□□ -0.73
NFIA-204ENST00000371187 CENPBP07199 599 aaPredicted RBP10.51□□□□□ -0.73
NFIA-204ENST00000371187 ACIN1Q9UKV3 1341 aaKnown RBP10.5□□□□□ -0.73
NFIA-204ENST00000371187 ZEB1P37275 1124 aaPredicted RBP10.38□□□□□ -0.75
NFIA-204ENST00000371187 CCDC88BA6NC98 1476 aa10.37□□□□□ -0.75
NFIA-204ENST00000371187 GTF3C3Q9Y5Q9 886 aa10.37□□□□□ -0.75
NFIA-204ENST00000371187 NEUROD1Q13562 356 aa10.36□□□□□ -0.75
NFIA-204ENST00000371187 PLPPR3Q6T4P5 718 aa10.36□□□□□ -0.75
NFIA-204ENST00000371187 SLC24A1O60721 1099 aa10.32□□□□□ -0.76
NFIA-204ENST00000371187 ANP32EQ9BTT0 268 aa10.29□□□□□ -0.76
NFIA-204ENST00000371187 FOXD1Q16676 465 aa10.29□□□□□ -0.76
NFIA-204ENST00000371187 CFTRP13569 1480 aa10.22□□□□□ -0.77
NFIA-204ENST00000371187 CADPSQ9ULU8 1353 aa10.21□□□□□ -0.77
NFIA-204ENST00000371187 PRDM2Q13029 1718 aa10.21□□□□□ -0.78
NFIA-204ENST00000371187 LAMC3Q9Y6N6 1575 aa10.21□□□□□ -0.78
NFIA-204ENST00000371187 NESP48681 1621 aa10.18□□□□□ -0.78
NFIA-204ENST00000371187 TRIM26Q12899 539 aaPredicted RBP10.13□□□□□ -0.79
NFIA-204ENST00000371187 CSRNP3Q8WYN3 585 aa10.13□□□□□ -0.79
NFIA-204ENST00000371187 PDS5BQ9NTI5 1447 aa10.12□□□□□ -0.79
NFIA-204ENST00000371187 FANCD2Q9BXW9 1451 aa10.11□□□□□ -0.79
NFIA-204ENST00000371187 ABCC8Q09428 1581 aa10.1□□□□□ -0.79
NFIA-204ENST00000371187 CEP164Q9UPV0 1460 aa10.09□□□□□ -0.79
NFIA-204ENST00000371187 MSH5O43196 834 aa10.09□□□□□ -0.79
NFIA-204ENST00000371187 KIF21AQ7Z4S6 1674 aa10.08□□□□□ -0.8
NFIA-204ENST00000371187 WRNQ14191 1432 aaPredicted RBP eCLIP10.06□□□□□ -0.8
NFIA-204ENST00000371187 ERCC6Q03468 1493 aa10.04□□□□□ -0.8
NFIA-204ENST00000371187 DAXXQ9UER7 740 aaPredicted RBP10.04□□□□□ -0.8
NFIA-204ENST00000371187 SYNJ1O43426 1573 aa10.04□□□□□ -0.8
NFIA-204ENST00000371187 LOC105371045A0A1W2PR82 267 aa10.03□□□□□ -0.8
NFIA-204ENST00000371187 BIVM-ERCC5R4GMW8 1640 aa10.03□□□□□ -0.8
NFIA-204ENST00000371187 CUX1P39880 1505 aa10.03□□□□□ -0.8
NFIA-204ENST00000371187 TOP2BQ02880 1626 aa10.02□□□□□ -0.81
NFIA-204ENST00000371187 DNMBPQ6XZF7 1577 aa10.02□□□□□ -0.81
NFIA-204ENST00000371187 MRC2Q9UBG0 1479 aa10.01□□□□□ -0.81
NFIA-204ENST00000371187 TRIM41Q8WV44 630 aa10□□□□□ -0.81
NFIA-204ENST00000371187 URB2Q14146 1524 aaKnown RBP10□□□□□ -0.81
NFIA-204ENST00000371187 TOPBP1Q92547 1522 aa9.99□□□□□ -0.81
NFIA-204ENST00000371187 THOC2Q8NI27 1593 aaKnown RBP9.99□□□□□ -0.81
NFIA-204ENST00000371187 WDR62O43379 1518 aa9.97□□□□□ -0.81
NFIA-204ENST00000371187 EIF5BO60841 1220 aaKnown RBP9.96□□□□□ -0.82
NFIA-204ENST00000371187 UBE2Q2Q8WVN8 375 aa9.96□□□□□ -0.82
NFIA-204ENST00000371187 FGD5Q6ZNL6 1462 aa9.95□□□□□ -0.82
NFIA-204ENST00000371187 POLA1P09884 1462 aaPredicted RBP9.92□□□□□ -0.82
NFIA-204ENST00000371187 DIEXFQ68CQ4 756 aaKnown RBP9.9□□□□□ -0.82
NFIA-204ENST00000371187 TSHZ2Q9NRE2 1034 aa9.9□□□□□ -0.82
NFIA-204ENST00000371187 CLSPNQ9HAW4 1339 aa9.9□□□□□ -0.82
NFIA-204ENST00000371187 ANO8Q9HCE9 1232 aaPredicted RBP9.9□□□□□ -0.82
NFIA-204ENST00000371187 WDR97A6NE52 1622 aa9.87□□□□□ -0.83
NFIA-204ENST00000371187 SOGA1O94964 1423 aa9.87□□□□□ -0.83
NFIA-204ENST00000371187 RAD54L2Q9Y4B4 1467 aa9.87□□□□□ -0.83
NFIA-204ENST00000371187 CUX2O14529 1486 aa9.86□□□□□ -0.83
NFIA-204ENST00000371187 ABCA10Q8WWZ4 1543 aa9.86□□□□□ -0.83
NFIA-204ENST00000371187 TARBP1Q13395 1621 aaKnown RBP9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms