RNA–Protein interactions for RNA: ENST00000496712.1

NFIA-214, Transcript of nuclear factor I A, humanhuman

TSL 3

Gene NFIA, Length 603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIA-214ENST00000496712 AEBP2Q6ZN18 517 aaPredicted RBP22.28■■□□□ 1.16
NFIA-214ENST00000496712 CHIC1Q5VXU3 224 aa22.1■■□□□ 1.13
NFIA-214ENST00000496712 PHF23Q9BUL5 403 aaPredicted RBP19.34■□□□□ 0.69
NFIA-214ENST00000496712 SENP3Q9H4L4 574 aaPredicted RBP19.05■□□□□ 0.64
NFIA-214ENST00000496712 PLPPR3Q6T4P5 718 aa18.09■□□□□ 0.49
NFIA-214ENST00000496712 FOXD1Q16676 465 aa17.51■□□□□ 0.39
NFIA-214ENST00000496712 ADRA2BP18089 450 aa16.95■□□□□ 0.3
NFIA-214ENST00000496712 PPP6R1Q9UPN7 881 aa16.94■□□□□ 0.3
NFIA-214ENST00000496712 PIAS4Q8N2W9 510 aaPredicted RBP16.62■□□□□ 0.25
NFIA-214ENST00000496712 POTEDQ86YR6 584 aa16.42■□□□□ 0.22
NFIA-214ENST00000496712 MSH5O43196 834 aa16.23■□□□□ 0.19
NFIA-214ENST00000496712 PPP4R3CPQ6ZMV5 832 aa15.89■□□□□ 0.13
NFIA-214ENST00000496712 SCAF1Q9H7N4 1312 aaKnown RBP15.71■□□□□ 0.11
NFIA-214ENST00000496712 KCNA4P22459 653 aa15.71■□□□□ 0.11
NFIA-214ENST00000496712 NCBP3Q53F19 620 aaKnown RBP15.64■□□□□ 0.09
NFIA-214ENST00000496712 CNKSR2Q8WXI2 1034 aa15.47■□□□□ 0.07
NFIA-214ENST00000496712 NPM3O75607 178 aaKnown RBP15.3■□□□□ 0.04
NFIA-214ENST00000496712 MAPK8IP2Q13387 824 aaPredicted RBP15.26■□□□□ 0.03
NFIA-214ENST00000496712 DMRT2Q9Y5R5 561 aa15.2■□□□□ 0.02
NFIA-214ENST00000496712 RNF216Q9NWF9 866 aaPredicted RBP15.12■□□□□ 0.01
NFIA-214ENST00000496712 SLC4A1APQ9BWU0 796 aaKnown RBP15.07■□□□□ 0
NFIA-214ENST00000496712 DNAJC5BQ9UF47 199 aa15.03■□□□□ -0
NFIA-214ENST00000496712 HOXD11P31277 338 aaPredicted RBP14.99□□□□□ -0.01
NFIA-214ENST00000496712 EHMT2Q96KQ7 1210 aa14.8□□□□□ -0.04
NFIA-214ENST00000496712 CSRNP3Q8WYN3 585 aa14.55□□□□□ -0.08
NFIA-214ENST00000496712 FOXD4L1Q9NU39 408 aa14.53□□□□□ -0.08
NFIA-214ENST00000496712 ZBTB22O15209 634 aa14.44□□□□□ -0.1
NFIA-214ENST00000496712 DCAF8L1A6NGE4 600 aa14.43□□□□□ -0.1
NFIA-214ENST00000496712 SLC4A2P04920 1241 aa14.36□□□□□ -0.11
NFIA-214ENST00000496712 MYCNP04198 464 aaPredicted RBP14.24□□□□□ -0.13
NFIA-214ENST00000496712 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.23□□□□□ -0.134e-15■■□□□ 13.6
NFIA-214ENST00000496712 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.08□□□□□ -0.16
NFIA-214ENST00000496712 HNRNPUL2Q1KMD3 747 aaKnown RBP14.08□□□□□ -0.16
NFIA-214ENST00000496712 ATXN8OSP0DMR3 200 aa14.06□□□□□ -0.16
NFIA-214ENST00000496712 U3KPZ7 1027 aaPredicted RBP14.02□□□□□ -0.17
NFIA-214ENST00000496712 SAMD1Q6SPF0 538 aaPredicted RBP14□□□□□ -0.17
NFIA-214ENST00000496712 APLP2Q06481 763 aa13.93□□□□□ -0.18
NFIA-214ENST00000496712 CACNB1Q02641 598 aaPredicted RBP13.88□□□□□ -0.19
NFIA-214ENST00000496712 RNF39Q9H2S5 420 aa13.85□□□□□ -0.19
NFIA-214ENST00000496712 C1QBPQ07021 282 aaKnown RBP13.76□□□□□ -0.21
NFIA-214ENST00000496712 ATF5Q9Y2D1 282 aaPredicted RBP13.64□□□□□ -0.23
NFIA-214ENST00000496712 ZNF219Q9P2Y4 722 aaPredicted RBP13.62□□□□□ -0.23
NFIA-214ENST00000496712 SPINK5Q9NQ38 1064 aaPredicted RBP13.5□□□□□ -0.25
NFIA-214ENST00000496712 CAPN15O75808 1086 aa13.49□□□□□ -0.25
NFIA-214ENST00000496712 TRHP20396 242 aaPredicted RBP13.44□□□□□ -0.26
NFIA-214ENST00000496712 ZBTB12Q9Y330 459 aaPredicted RBP13.29□□□□□ -0.28
NFIA-214ENST00000496712 POLA2Q14181 598 aa13.27□□□□□ -0.29
NFIA-214ENST00000496712 FBLN2P98095 1184 aa13.24□□□□□ -0.29
NFIA-214ENST00000496712 DSG3P32926 999 aa13.23□□□□□ -0.29
NFIA-214ENST00000496712 ABCB7O75027 752 aa13.19□□□□□ -0.3
NFIA-214ENST00000496712 FKBP8Q14318 412 aa13.17□□□□□ -0.3
NFIA-214ENST00000496712 MKRN4PQ13434 485 aaPredicted RBP13.12□□□□□ -0.31
NFIA-214ENST00000496712 SPDYE4A6NLX3 237 aa12.98□□□□□ -0.33
NFIA-214ENST00000496712 SPDYE2BA6NHP3 402 aa12.88□□□□□ -0.35
NFIA-214ENST00000496712 SPDYE6P0CI01 402 aa12.88□□□□□ -0.35
NFIA-214ENST00000496712 SPDYE2Q495Y8 402 aa12.88□□□□□ -0.35
NFIA-214ENST00000496712 PROM2Q8N271 834 aa12.88□□□□□ -0.35
NFIA-214ENST00000496712 OSCARQ8IYS5 282 aa12.86□□□□□ -0.35
NFIA-214ENST00000496712 FBXO3Q9UK99 471 aa12.78□□□□□ -0.36
NFIA-214ENST00000496712 SSUH2Q9Y2M2 353 aa12.78□□□□□ -0.36
NFIA-214ENST00000496712 POTEHQ6S545 545 aa12.77□□□□□ -0.37
NFIA-214ENST00000496712 ZNF692Q9BU19 519 aaPredicted RBP12.76□□□□□ -0.37
NFIA-214ENST00000496712 RBM42Q9BTD8 480 aaKnown RBP12.74□□□□□ -0.37
NFIA-214ENST00000496712 PABPN1Q86U42 306 aaKnown RBP eCLIP12.59□□□□□ -0.39
NFIA-214ENST00000496712 AKT1S1Q96B36 256 aa12.57□□□□□ -0.4
NFIA-214ENST00000496712 STAG3Q9UJ98 1225 aa12.57□□□□□ -0.4
NFIA-214ENST00000496712 VASPP50552 380 aaPredicted RBP12.53□□□□□ -0.4
NFIA-214ENST00000496712 AMER1Q5JTC6 1135 aaPredicted RBP12.51□□□□□ -0.41
NFIA-214ENST00000496712 SPDYE1Q8NFV5 336 aaPredicted RBP12.43□□□□□ -0.42
NFIA-214ENST00000496712 REM2Q8IYK8 340 aaPredicted RBP12.36□□□□□ -0.43
NFIA-214ENST00000496712 PLEKHG5O94827 1062 aa12.33□□□□□ -0.44
NFIA-214ENST00000496712 RTN4Q9NQC3 1192 aaKnown RBP12.31□□□□□ -0.44
NFIA-214ENST00000496712 PLCD3Q8N3E9 789 aa12.3□□□□□ -0.44
NFIA-214ENST00000496712 ZBTB47Q9UFB7 747 aaPredicted RBP12.3□□□□□ -0.44
NFIA-214ENST00000496712 IFNLR1Q8IU57 520 aaPredicted RBP12.29□□□□□ -0.44
NFIA-214ENST00000496712 CLEC11AQ9Y240 323 aa12.25□□□□□ -0.45
NFIA-214ENST00000496712 MIER1Q8N108 512 aa12.24□□□□□ -0.45
NFIA-214ENST00000496712 PITPNM1O00562 1244 aa12.23□□□□□ -0.45
NFIA-214ENST00000496712 PRR29P0C7W0 189 aa12.22□□□□□ -0.45
NFIA-214ENST00000496712 KLHL34Q8N239 644 aa12.2□□□□□ -0.46
NFIA-214ENST00000496712 SPOCK2Q92563 424 aa12.19□□□□□ -0.46
NFIA-214ENST00000496712 CREBZFQ9NS37 354 aa12.09□□□□□ -0.47
NFIA-214ENST00000496712 CHRDL2Q6WN34 429 aa12.01□□□□□ -0.49
NFIA-214ENST00000496712 NPM1P06748 294 aaKnown RBP eCLIP12□□□□□ -0.49
NFIA-214ENST00000496712 MNX1P50219 401 aaPredicted RBP12□□□□□ -0.49
NFIA-214ENST00000496712 TRIM41Q8WV44 630 aa11.99□□□□□ -0.49
NFIA-214ENST00000496712 FXR2P51116 673 aaKnown RBP eCLIP11.98□□□□□ -0.49
NFIA-214ENST00000496712 PKD2Q13563 968 aa11.97□□□□□ -0.49
NFIA-214ENST00000496712 GSE1Q14687 1217 aa11.96□□□□□ -0.49
NFIA-214ENST00000496712 NUBP1P53384 320 aa11.95□□□□□ -0.5
NFIA-214ENST00000496712 FAM212AQ96EL1 285 aa11.93□□□□□ -0.5
NFIA-214ENST00000496712 PRKAR2AP13861 404 aaKnown RBP11.91□□□□□ -0.5
NFIA-214ENST00000496712 ECM2O94769 699 aaPredicted RBP11.9□□□□□ -0.5
NFIA-214ENST00000496712 CHADLQ6NUI6 762 aa11.89□□□□□ -0.51
NFIA-214ENST00000496712 CIZ1Q9ULV3 898 aaPredicted RBP11.89□□□□□ -0.51
NFIA-214ENST00000496712 FARP1Q9Y4F1 1045 aaPredicted RBP11.89□□□□□ -0.51
NFIA-214ENST00000496712 PIP4P2Q8N4L2 257 aa11.88□□□□□ -0.51
NFIA-214ENST00000496712 RASEFQ8IZ41 740 aa11.82□□□□□ -0.52
NFIA-214ENST00000496712 DCAF8Q5TAQ9 597 aa11.8□□□□□ -0.52
NFIA-214ENST00000496712 PAK3O75914 559 aaPredicted RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms