RNA–Protein interactions for RNA: ENST00000397515.6

UBE2I-204, Transcript of ubiquitin conjugating enzyme E2 I, humanhuman

APPRIS P1 TSL 3 BASIC

Gene UBE2I, Length 3,109 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2I-204ENST00000397515 NISCHQ9Y2I1 1504 aa26.8■■□□□ 1.88
UBE2I-204ENST00000397515 SHROOM4Q9ULL8 1493 aa24.65■■□□□ 1.54
UBE2I-204ENST00000397515 SUPT5HO00267 1087 aaKnown RBP24.33■■□□□ 1.49
UBE2I-204ENST00000397515 DCAF8L2P0C7V8 631 aa24.18■■□□□ 1.46
UBE2I-204ENST00000397515 PCGF6Q9BYE7 350 aa23.2■■□□□ 1.3
UBE2I-204ENST00000397515 EHMT2Q96KQ7 1210 aa23.19■■□□□ 1.3
UBE2I-204ENST00000397515 PPARGC1BQ86YN6 1023 aaKnown RBP23■■□□□ 1.27
UBE2I-204ENST00000397515 CHIC1Q5VXU3 224 aa22.99■■□□□ 1.27
UBE2I-204ENST00000397515 LOC105371045A0A1W2PR82 267 aa22.96■■□□□ 1.27
UBE2I-204ENST00000397515 MYO15BQ96JP2 1530 aa22.88■■□□□ 1.25
UBE2I-204ENST00000397515 CCDC180Q9P1Z9 1646 aa22.82■■□□□ 1.24
UBE2I-204ENST00000397515 FAM9AQ8IZU1 332 aaPredicted RBP22.76■■□□□ 1.23
UBE2I-204ENST00000397515 ZCCHC6Q5VYS8 1495 aaKnown RBP22.69■■□□□ 1.22
UBE2I-204ENST00000397515 HRCP23327 699 aa22.68■■□□□ 1.22
UBE2I-204ENST00000397515 TTBK1Q5TCY1 1321 aaPredicted RBP22.37■■□□□ 1.17
UBE2I-204ENST00000397515 TRIM41Q8WV44 630 aa22.17■■□□□ 1.14
UBE2I-204ENST00000397515 DCAF1Q9Y4B6 1507 aa22.05■■□□□ 1.12
UBE2I-204ENST00000397515 TRIM26Q12899 539 aaPredicted RBP22■■□□□ 1.11
UBE2I-204ENST00000397515 SCRIBQ14160 1630 aa21.76■■□□□ 1.07
UBE2I-204ENST00000397515 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.75■■□□□ 1.07
UBE2I-204ENST00000397515 RANGAP1P46060 587 aaPredicted RBP21.68■■□□□ 1.06
UBE2I-204ENST00000397515 ABCC9O60706 1549 aa21.67■■□□□ 1.06
UBE2I-204ENST00000397515 CCER1Q8TC90 406 aaPredicted RBP21.6■■□□□ 1.05
UBE2I-204ENST00000397515 RSF1Q96T23 1441 aaPredicted RBP21.55■■□□□ 1.04
UBE2I-204ENST00000397515 RB1CC1Q8TDY2 1594 aa21.43■■□□□ 1.02
UBE2I-204ENST00000397515 CECR2Q9BXF3 1484 aa21.4■■□□□ 1.02
UBE2I-204ENST00000397515 YTHDC1Q96MU7 727 aaKnown RBP21.36■■□□□ 1.01
UBE2I-204ENST00000397515 SCAF1Q9H7N4 1312 aaKnown RBP21.36■■□□□ 1.01
UBE2I-204ENST00000397515 UBTFP17480 764 aaKnown RBP21.35■■□□□ 1.01
UBE2I-204ENST00000397515 ZEB1P37275 1124 aaPredicted RBP21.33■■□□□ 1.01
UBE2I-204ENST00000397515 PABPN1Q86U42 306 aaKnown RBP eCLIP21.28■■□□□ 1
UBE2I-204ENST00000397515 HNRNPUL2Q1KMD3 747 aaKnown RBP21.21■□□□□ 0.99
UBE2I-204ENST00000397515 MROH2BQ7Z745 1585 aa21.12■□□□□ 0.97
UBE2I-204ENST00000397515 NEUROD1Q13562 356 aa21.11■□□□□ 0.97
UBE2I-204ENST00000397515 NACADO15069 1562 aa21.1■□□□□ 0.97
UBE2I-204ENST00000397515 DIEXFQ68CQ4 756 aaKnown RBP21.09■□□□□ 0.97
UBE2I-204ENST00000397515 GTF3C3Q9Y5Q9 886 aa21.02■□□□□ 0.95
UBE2I-204ENST00000397515 WIZO95785 1651 aa21.01■□□□□ 0.95
UBE2I-204ENST00000397515 ABCC8Q09428 1581 aa20.96■□□□□ 0.95
UBE2I-204ENST00000397515 SOGA1O94964 1423 aa20.88■□□□□ 0.93
UBE2I-204ENST00000397515 ACIN1Q9UKV3 1341 aaKnown RBP20.87■□□□□ 0.93
UBE2I-204ENST00000397515 CCDC88BA6NC98 1476 aa20.86■□□□□ 0.93
UBE2I-204ENST00000397515 ITGAEP38570 1179 aa20.84■□□□□ 0.93
UBE2I-204ENST00000397515 APLP2Q06481 763 aa20.8■□□□□ 0.92
UBE2I-204ENST00000397515 CSRNP3Q8WYN3 585 aa20.8■□□□□ 0.92
UBE2I-204ENST00000397515 RUSC2Q8N2Y8 1516 aa20.8■□□□□ 0.92
UBE2I-204ENST00000397515 CENPBP07199 599 aaPredicted RBP20.78■□□□□ 0.92
UBE2I-204ENST00000397515 CEP162Q5TB80 1403 aa20.74■□□□□ 0.91
UBE2I-204ENST00000397515 MIER1Q8N108 512 aa20.67■□□□□ 0.9
UBE2I-204ENST00000397515 ZNF316A6NFI3 1004 aaPredicted RBP20.62■□□□□ 0.89
UBE2I-204ENST00000397515 BAZ1AQ9NRL2 1556 aaPredicted RBP20.62■□□□□ 0.89
UBE2I-204ENST00000397515 ATP1B4Q9UN42 357 aaPredicted RBP20.6■□□□□ 0.89
UBE2I-204ENST00000397515 PELP1Q8IZL8 1130 aaKnown RBP20.5■□□□□ 0.87
UBE2I-204ENST00000397515 EIF4G1Q04637 1599 aaKnown RBP20.49■□□□□ 0.87
UBE2I-204ENST00000397515 TOP2AP11388 1531 aaKnown RBP20.42■□□□□ 0.86
UBE2I-204ENST00000397515 SMARCA4P51532 1647 aa20.41■□□□□ 0.86
UBE2I-204ENST00000397515 UNC13AQ9UPW8 1703 aa20.39■□□□□ 0.85
UBE2I-204ENST00000397515 TNIKQ9UKE5 1360 aa20.38■□□□□ 0.85
UBE2I-204ENST00000397515 P3H3Q8IVL6 736 aa20.38■□□□□ 0.85
UBE2I-204ENST00000397515 WRNQ14191 1432 aaPredicted RBP eCLIP20.35■□□□□ 0.85
UBE2I-204ENST00000397515 HIRIP3Q9BW71 556 aaPredicted RBP20.35■□□□□ 0.85
UBE2I-204ENST00000397515 CLIP1P30622 1438 aa20.35■□□□□ 0.85
UBE2I-204ENST00000397515 BCANQ96GW7 911 aa20.34■□□□□ 0.85
UBE2I-204ENST00000397515 KANK4Q5T7N3 995 aaPredicted RBP20.31■□□□□ 0.84
UBE2I-204ENST00000397515 SMARCA2P51531 1590 aa20.29■□□□□ 0.84
UBE2I-204ENST00000397515 GOLGA3Q08378 1498 aa20.26■□□□□ 0.83
UBE2I-204ENST00000397515 KCNH8Q96L42 1107 aa20.22■□□□□ 0.83
UBE2I-204ENST00000397515 RAPGEF2Q9Y4G8 1499 aa20.21■□□□□ 0.83
UBE2I-204ENST00000397515 BICRAQ9NZM4 1560 aa20.2■□□□□ 0.82
UBE2I-204ENST00000397515 FAM50AQ14320 339 aaKnown RBP20.19■□□□□ 0.82
UBE2I-204ENST00000397515 CNGB1Q14028 1251 aaPredicted RBP20.13■□□□□ 0.81
UBE2I-204ENST00000397515 SYNJ1O43426 1573 aa20.07■□□□□ 0.8
UBE2I-204ENST00000397515 SIN3AQ96ST3 1273 aa20.06■□□□□ 0.8
UBE2I-204ENST00000397515 CEP164Q9UPV0 1460 aa20.06■□□□□ 0.8
UBE2I-204ENST00000397515 DDX10Q13206 875 aaKnown RBP20.05■□□□□ 0.8
UBE2I-204ENST00000397515 PEG3Q9GZU2 1588 aa20.05■□□□□ 0.8
UBE2I-204ENST00000397515 ARID3CA6NKF2 412 aa20.05■□□□□ 0.8
UBE2I-204ENST00000397515 EEA1Q15075 1411 aa20.04■□□□□ 0.8
UBE2I-204ENST00000397515 BAZ1BQ9UIG0 1483 aaKnown RBP20.02■□□□□ 0.8
UBE2I-204ENST00000397515 VPS8Q8N3P4 1428 aa20.02■□□□□ 0.79
UBE2I-204ENST00000397515 TRIM52Q96A61 297 aa19.97■□□□□ 0.79
UBE2I-204ENST00000397515 ATAD2BQ9ULI0 1458 aa19.93■□□□□ 0.78
UBE2I-204ENST00000397515 SUPT16HQ9Y5B9 1047 aaKnown RBP19.9■□□□□ 0.78
UBE2I-204ENST00000397515 SENP3-EIF4A1A0A087X0R7 540 aa19.89■□□□□ 0.77
UBE2I-204ENST00000397515 DHX57Q6P158 1386 aaKnown RBP19.89■□□□□ 0.77
UBE2I-204ENST00000397515 FKBP8Q14318 412 aa19.85■□□□□ 0.77
UBE2I-204ENST00000397515 KIF21BO75037 1637 aa19.84■□□□□ 0.77
UBE2I-204ENST00000397515 IRX6P78412 446 aaPredicted RBP19.83■□□□□ 0.77
UBE2I-204ENST00000397515 ARAP1Q96P48 1450 aa19.77■□□□□ 0.76
UBE2I-204ENST00000397515 CHIC2Q9UKJ5 165 aa19.75■□□□□ 0.75
UBE2I-204ENST00000397515 CCNB3Q8WWL7 1395 aa19.73■□□□□ 0.75
UBE2I-204ENST00000397515 RAB3GAP2Q9H2M9 1393 aa19.72■□□□□ 0.75
UBE2I-204ENST00000397515 POLR3GLQ9BT43 218 aa19.72■□□□□ 0.75
UBE2I-204ENST00000397515 CUX2O14529 1486 aa19.66■□□□□ 0.74
UBE2I-204ENST00000397515 KIF27Q86VH2 1401 aa19.66■□□□□ 0.74
UBE2I-204ENST00000397515 NEFLP07196 543 aa19.63■□□□□ 0.73
UBE2I-204ENST00000397515 TSHZ2Q9NRE2 1034 aa19.62■□□□□ 0.73
UBE2I-204ENST00000397515 RRP7BPQ9NSQ0 103 aa19.61■□□□□ 0.73
UBE2I-204ENST00000397515 TOP2BQ02880 1626 aa19.61■□□□□ 0.73
UBE2I-204ENST00000397515 FOXD1Q16676 465 aa19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms