RNA–Protein interactions for RNA: ENST00000371184.6

NFIA-202, Transcript of nuclear factor I A, humanhuman

TSL 5 BASIC

Gene NFIA, Length 1,348 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIA-202ENST00000371184 NISCHQ9Y2I1 1504 aa27.1■■□□□ 1.93
NFIA-202ENST00000371184 CCDC180Q9P1Z9 1646 aa23.66■■□□□ 1.38
NFIA-202ENST00000371184 ZCCHC6Q5VYS8 1495 aaKnown RBP22.73■■□□□ 1.23
NFIA-202ENST00000371184 ABCC9O60706 1549 aa22.58■■□□□ 1.21
NFIA-202ENST00000371184 DCAF8L2P0C7V8 631 aa22.53■■□□□ 1.2
NFIA-202ENST00000371184 DCAF1Q9Y4B6 1507 aa22.38■■□□□ 1.17
NFIA-202ENST00000371184 MYO15BQ96JP2 1530 aa22.15■■□□□ 1.14
NFIA-202ENST00000371184 NACADO15069 1562 aa22.1■■□□□ 1.13
NFIA-202ENST00000371184 SHROOM4Q9ULL8 1493 aa22.09■■□□□ 1.13
NFIA-202ENST00000371184 RB1CC1Q8TDY2 1594 aa21.95■■□□□ 1.1
NFIA-202ENST00000371184 SCRIBQ14160 1630 aa21.8■■□□□ 1.08
NFIA-202ENST00000371184 UNC13AQ9UPW8 1703 aa21.44■■□□□ 1.02
NFIA-202ENST00000371184 PABPN1Q86U42 306 aaKnown RBP eCLIP21.29■■□□□ 1
NFIA-202ENST00000371184 BICRAQ9NZM4 1560 aa21.27■■□□□ 1
NFIA-202ENST00000371184 SUPT5HO00267 1087 aaKnown RBP21.2■□□□□ 0.98
NFIA-202ENST00000371184 CECR2Q9BXF3 1484 aa21.09■□□□□ 0.97
NFIA-202ENST00000371184 RSF1Q96T23 1441 aaPredicted RBP20.98■□□□□ 0.95
NFIA-202ENST00000371184 MROH2BQ7Z745 1585 aa20.95■□□□□ 0.94
NFIA-202ENST00000371184 BAZ1AQ9NRL2 1556 aaPredicted RBP20.93■□□□□ 0.94
NFIA-202ENST00000371184 SMARCA4P51532 1647 aa20.85■□□□□ 0.93
NFIA-202ENST00000371184 WIZO95785 1651 aa20.75■□□□□ 0.91
NFIA-202ENST00000371184 EIF4G1Q04637 1599 aaKnown RBP20.65■□□□□ 0.9
NFIA-202ENST00000371184 PEG3Q9GZU2 1588 aa20.58■□□□□ 0.89
NFIA-202ENST00000371184 ATAD2BQ9ULI0 1458 aa20.57■□□□□ 0.88
NFIA-202ENST00000371184 TOP2AP11388 1531 aaKnown RBP20.55■□□□□ 0.88
NFIA-202ENST00000371184 SMARCA2P51531 1590 aa20.54■□□□□ 0.88
NFIA-202ENST00000371184 BAZ1BQ9UIG0 1483 aaKnown RBP20.45■□□□□ 0.86
NFIA-202ENST00000371184 NCAPD3P42695 1498 aa20.4■□□□□ 0.86
NFIA-202ENST00000371184 CC2D2AQ9P2K1 1620 aa20.39■□□□□ 0.86
NFIA-202ENST00000371184 HMGXB3Q12766 1538 aa20.35■□□□□ 0.85
NFIA-202ENST00000371184 CCDC88BA6NC98 1476 aa20.35■□□□□ 0.85
NFIA-202ENST00000371184 CHIC1Q5VXU3 224 aa20.18■□□□□ 0.82
NFIA-202ENST00000371184 DNAJC5BQ9UF47 199 aa20.03■□□□□ 0.8
NFIA-202ENST00000371184 TRIM41Q8WV44 630 aa19.92■□□□□ 0.78
NFIA-202ENST00000371184 CFTRP13569 1480 aa19.91■□□□□ 0.78
NFIA-202ENST00000371184 CADPSQ9ULU8 1353 aa19.89■□□□□ 0.77
NFIA-202ENST00000371184 ABCC8Q09428 1581 aa19.87■□□□□ 0.77
NFIA-202ENST00000371184 WRNQ14191 1432 aaPredicted RBP eCLIP19.77■□□□□ 0.76
NFIA-202ENST00000371184 NESP48681 1621 aa19.77■□□□□ 0.75
NFIA-202ENST00000371184 PRDM2Q13029 1718 aa19.74■□□□□ 0.75
NFIA-202ENST00000371184 LAMC3Q9Y6N6 1575 aa19.72■□□□□ 0.75
NFIA-202ENST00000371184 FANCD2Q9BXW9 1451 aa19.67■□□□□ 0.74
NFIA-202ENST00000371184 SYNJ1O43426 1573 aa19.67■□□□□ 0.74
NFIA-202ENST00000371184 PDS5BQ9NTI5 1447 aa19.6■□□□□ 0.73
NFIA-202ENST00000371184 CUX1P39880 1505 aa19.6■□□□□ 0.73
NFIA-202ENST00000371184 TOP2BQ02880 1626 aa19.59■□□□□ 0.73
NFIA-202ENST00000371184 FAM9AQ8IZU1 332 aaPredicted RBP19.58■□□□□ 0.73
NFIA-202ENST00000371184 CEP164Q9UPV0 1460 aa19.57■□□□□ 0.72
NFIA-202ENST00000371184 BIVM-ERCC5R4GMW8 1640 aa19.56■□□□□ 0.72
NFIA-202ENST00000371184 KIF21AQ7Z4S6 1674 aa19.49■□□□□ 0.71
NFIA-202ENST00000371184 SOGA1O94964 1423 aa19.48■□□□□ 0.71
NFIA-202ENST00000371184 DNMBPQ6XZF7 1577 aa19.45■□□□□ 0.7
NFIA-202ENST00000371184 TOPBP1Q92547 1522 aa19.44■□□□□ 0.7
NFIA-202ENST00000371184 URB2Q14146 1524 aaKnown RBP19.43■□□□□ 0.7
NFIA-202ENST00000371184 LOC105371045A0A1W2PR82 267 aa19.43■□□□□ 0.7
NFIA-202ENST00000371184 FGD5Q6ZNL6 1462 aa19.41■□□□□ 0.7
NFIA-202ENST00000371184 RUSC2Q8N2Y8 1516 aa19.41■□□□□ 0.7
NFIA-202ENST00000371184 EEA1Q15075 1411 aa19.4■□□□□ 0.7
NFIA-202ENST00000371184 ERCC6Q03468 1493 aa19.39■□□□□ 0.69
NFIA-202ENST00000371184 MRC2Q9UBG0 1479 aa19.36■□□□□ 0.69
NFIA-202ENST00000371184 CSRNP3Q8WYN3 585 aa19.34■□□□□ 0.69
NFIA-202ENST00000371184 EHMT2Q96KQ7 1210 aa19.34■□□□□ 0.69
NFIA-202ENST00000371184 POLA1P09884 1462 aaPredicted RBP19.33■□□□□ 0.69
NFIA-202ENST00000371184 RAD54L2Q9Y4B4 1467 aa19.29■□□□□ 0.68
NFIA-202ENST00000371184 KIF27Q86VH2 1401 aa19.29■□□□□ 0.68
NFIA-202ENST00000371184 CUX2O14529 1486 aa19.28■□□□□ 0.68
NFIA-202ENST00000371184 WDR62O43379 1518 aa19.24■□□□□ 0.67
NFIA-202ENST00000371184 ABCA10Q8WWZ4 1543 aa19.22■□□□□ 0.67
NFIA-202ENST00000371184 THOC2Q8NI27 1593 aaKnown RBP19.2■□□□□ 0.66
NFIA-202ENST00000371184 GOLGA3Q08378 1498 aa19.14■□□□□ 0.65
NFIA-202ENST00000371184 WDR97A6NE52 1622 aa19.13■□□□□ 0.65
NFIA-202ENST00000371184 KIF21BO75037 1637 aa19.13■□□□□ 0.65
NFIA-202ENST00000371184 TARBP1Q13395 1621 aaKnown RBP19.13■□□□□ 0.65
NFIA-202ENST00000371184 IGF1RP08069 1367 aa19.12■□□□□ 0.65
NFIA-202ENST00000371184 TDRD9Q8NDG6 1382 aaKnown RBP19.12■□□□□ 0.65
NFIA-202ENST00000371184 UBTFP17480 764 aaKnown RBP19.11■□□□□ 0.65
NFIA-202ENST00000371184 IFT140Q96RY7 1462 aa19.11■□□□□ 0.65
NFIA-202ENST00000371184 PRXQ9BXM0 1461 aa19.09■□□□□ 0.65
NFIA-202ENST00000371184 RAPGEF2Q9Y4G8 1499 aa19.09■□□□□ 0.65
NFIA-202ENST00000371184 GAPVD1Q14C86 1478 aa19.06■□□□□ 0.64
NFIA-202ENST00000371184 ABCA5Q8WWZ7 1642 aa19.06■□□□□ 0.64
NFIA-202ENST00000371184 TNIKQ9UKE5 1360 aa19.05■□□□□ 0.64
NFIA-202ENST00000371184 CARMIL1Q5VZK9 1371 aa19.04■□□□□ 0.64
NFIA-202ENST00000371184 ERICH3Q5RHP9 1530 aa19.03■□□□□ 0.64
NFIA-202ENST00000371184 AQRO60306 1485 aaKnown RBP eCLIP19.01■□□□□ 0.631e-7■■□□□ 12.1
NFIA-202ENST00000371184 ZNF608Q9ULD9 1512 aaPredicted RBP19■□□□□ 0.63
NFIA-202ENST00000371184 CUL7Q14999 1698 aa18.96■□□□□ 0.63
NFIA-202ENST00000371184 CEP162Q5TB80 1403 aa18.95■□□□□ 0.62
NFIA-202ENST00000371184 GRIN2BQ13224 1484 aa18.94■□□□□ 0.62
NFIA-202ENST00000371184 PBRM1Q86U86 1689 aa18.93■□□□□ 0.62
NFIA-202ENST00000371184 EIF4G3O43432 1585 aaKnown RBP18.91■□□□□ 0.62
NFIA-202ENST00000371184 RANGAP1P46060 587 aaPredicted RBP18.88■□□□□ 0.61
NFIA-202ENST00000371184 FHAD1B1AJZ9 1412 aa18.86■□□□□ 0.61
NFIA-202ENST00000371184 CLIP1P30622 1438 aa18.84■□□□□ 0.61
NFIA-202ENST00000371184 ADAMTS12P58397 1594 aa18.84■□□□□ 0.61
NFIA-202ENST00000371184 SNAPC4Q5SXM2 1469 aa18.83■□□□□ 0.61
NFIA-202ENST00000371184 AEBP2Q6ZN18 517 aaPredicted RBP18.8■□□□□ 0.6
NFIA-202ENST00000371184 MAGI1Q96QZ7 1491 aaPredicted RBP18.77■□□□□ 0.6
NFIA-202ENST00000371184 CHMP7Q8WUX9 453 aaPredicted RBP18.73■□□□□ 0.59
NFIA-202ENST00000371184 FBLN2P98095 1184 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms