RNA–Protein interactions for RNA: ENST00000551098.5

DDX23-208, Transcript of DEAD-box helicase 23, humanhuman

TSL 2

Gene DDX23, Length 1,083 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX23-208ENST00000551098 NISCHQ9Y2I1 1504 aa42.7■■■■■ 4.43
DDX23-208ENST00000551098 CCDC180Q9P1Z9 1646 aa38.06■■■■□ 3.68
DDX23-208ENST00000551098 ABCC9O60706 1549 aa37.82■■■■□ 3.65
DDX23-208ENST00000551098 RB1CC1Q8TDY2 1594 aa36.14■■■■□ 3.38
DDX23-208ENST00000551098 DCAF8L2P0C7V8 631 aa36.11■■■■□ 3.37
DDX23-208ENST00000551098 NACADO15069 1562 aa35.97■■■■□ 3.35
DDX23-208ENST00000551098 MYO15BQ96JP2 1530 aa35.57■■■■□ 3.28
DDX23-208ENST00000551098 ZCCHC6Q5VYS8 1495 aaKnown RBP35.43■■■■□ 3.26
DDX23-208ENST00000551098 PABPN1Q86U42 306 aaKnown RBP eCLIP35.35■■■■□ 3.25
DDX23-208ENST00000551098 DCAF1Q9Y4B6 1507 aa35.26■■■■□ 3.23
DDX23-208ENST00000551098 UNC13AQ9UPW8 1703 aa35.18■■■■□ 3.22
DDX23-208ENST00000551098 DNAJC5BQ9UF47 199 aa35.14■■■■□ 3.22
DDX23-208ENST00000551098 BICRAQ9NZM4 1560 aa34.99■■■■□ 3.19
DDX23-208ENST00000551098 SCRIBQ14160 1630 aa34.79■■■■□ 3.16
DDX23-208ENST00000551098 SHROOM4Q9ULL8 1493 aa34.59■■■■□ 3.13
DDX23-208ENST00000551098 EIF4G1Q04637 1599 aaKnown RBP34.15■■■■□ 3.06
DDX23-208ENST00000551098 CC2D2AQ9P2K1 1620 aa34.12■■■■□ 3.05
DDX23-208ENST00000551098 CECR2Q9BXF3 1484 aa34.03■■■■□ 3.04
DDX23-208ENST00000551098 NCAPD3P42695 1498 aa33.22■■■□□ 2.91
DDX23-208ENST00000551098 SMARCA4P51532 1647 aa33.19■■■□□ 2.9
DDX23-208ENST00000551098 ATAD2BQ9ULI0 1458 aa33.18■■■□□ 2.9
DDX23-208ENST00000551098 BAZ1AQ9NRL2 1556 aaPredicted RBP33.13■■■□□ 2.89
DDX23-208ENST00000551098 SMARCA2P51531 1590 aa33.1■■■□□ 2.89
DDX23-208ENST00000551098 HMGXB3Q12766 1538 aa32.96■■■□□ 2.87
DDX23-208ENST00000551098 BAZ1BQ9UIG0 1483 aaKnown RBP32.91■■■□□ 2.86
DDX23-208ENST00000551098 MROH2BQ7Z745 1585 aa32.9■■■□□ 2.86
DDX23-208ENST00000551098 PEG3Q9GZU2 1588 aa32.83■■■□□ 2.85
DDX23-208ENST00000551098 ERCC6Q03468 1493 aa32.68■■■□□ 2.82
DDX23-208ENST00000551098 NESP48681 1621 aa32.57■■■□□ 2.8
DDX23-208ENST00000551098 WIZO95785 1651 aa32.5■■■□□ 2.79
DDX23-208ENST00000551098 CUX2O14529 1486 aa32.42■■■□□ 2.78
DDX23-208ENST00000551098 RSF1Q96T23 1441 aaPredicted RBP32.4■■■□□ 2.78
DDX23-208ENST00000551098 LAMC3Q9Y6N6 1575 aa32.39■■■□□ 2.78
DDX23-208ENST00000551098 CADPSQ9ULU8 1353 aa32.28■■■□□ 2.76
DDX23-208ENST00000551098 PDS5BQ9NTI5 1447 aa32.27■■■□□ 2.76
DDX23-208ENST00000551098 TOP2AP11388 1531 aaKnown RBP32.13■■■□□ 2.73
DDX23-208ENST00000551098 KIF21AQ7Z4S6 1674 aa32.09■■■□□ 2.73
DDX23-208ENST00000551098 THOC2Q8NI27 1593 aaKnown RBP32.08■■■□□ 2.73
DDX23-208ENST00000551098 DNAJC5Q9H3Z4 198 aa32.03■■■□□ 2.72
DDX23-208ENST00000551098 CFTRP13569 1480 aa31.94■■■□□ 2.7
DDX23-208ENST00000551098 MRC2Q9UBG0 1479 aa31.91■■■□□ 2.7
DDX23-208ENST00000551098 FANCD2Q9BXW9 1451 aa31.89■■■□□ 2.7
DDX23-208ENST00000551098 CEP164Q9UPV0 1460 aa31.88■■■□□ 2.69
DDX23-208ENST00000551098 CCDC88BA6NC98 1476 aa31.81■■■□□ 2.68
DDX23-208ENST00000551098 WDR62O43379 1518 aa31.77■■■□□ 2.68
DDX23-208ENST00000551098 URB2Q14146 1524 aaKnown RBP31.56■■■□□ 2.64
DDX23-208ENST00000551098 PRDM2Q13029 1718 aa31.52■■■□□ 2.64
DDX23-208ENST00000551098 SUPT5HO00267 1087 aaKnown RBP31.41■■■□□ 2.62
DDX23-208ENST00000551098 ABCC8Q09428 1581 aa31.3■■■□□ 2.6
DDX23-208ENST00000551098 TOPBP1Q92547 1522 aa31.3■■■□□ 2.6
DDX23-208ENST00000551098 IFT140Q96RY7 1462 aa31.24■■■□□ 2.59
DDX23-208ENST00000551098 DNMBPQ6XZF7 1577 aa31.2■■■□□ 2.58
DDX23-208ENST00000551098 OSCARQ8IYS5 282 aa31.13■■■□□ 2.57
DDX23-208ENST00000551098 ZNF608Q9ULD9 1512 aaPredicted RBP31.12■■■□□ 2.57
DDX23-208ENST00000551098 POLA1P09884 1462 aaPredicted RBP31■■■□□ 2.55
DDX23-208ENST00000551098 SOGA1O94964 1423 aa30.95■■■□□ 2.54
DDX23-208ENST00000551098 TARBP1Q13395 1621 aaKnown RBP30.94■■■□□ 2.54
DDX23-208ENST00000551098 AQRO60306 1485 aaKnown RBP eCLIP30.94■■■□□ 2.541e-6■■□□□ 12.4
DDX23-208ENST00000551098 EIF4G3O43432 1585 aaKnown RBP30.92■■■□□ 2.54
DDX23-208ENST00000551098 RAD54L2Q9Y4B4 1467 aa30.91■■■□□ 2.54
DDX23-208ENST00000551098 CUX1P39880 1505 aa30.88■■■□□ 2.53
DDX23-208ENST00000551098 FGD5Q6ZNL6 1462 aa30.88■■■□□ 2.53
DDX23-208ENST00000551098 TRIM41Q8WV44 630 aa30.86■■■□□ 2.53
DDX23-208ENST00000551098 TDRD9Q8NDG6 1382 aaKnown RBP30.84■■■□□ 2.53
DDX23-208ENST00000551098 FBLN2P98095 1184 aa30.79■■■□□ 2.52
DDX23-208ENST00000551098 WDR97A6NE52 1622 aa30.65■■■□□ 2.5
DDX23-208ENST00000551098 CHD1O14646 1710 aa30.6■■■□□ 2.49
DDX23-208ENST00000551098 GRIN2BQ13224 1484 aa30.6■■■□□ 2.49
DDX23-208ENST00000551098 SNAPC4Q5SXM2 1469 aa30.6■■■□□ 2.49
DDX23-208ENST00000551098 CHMP7Q8WUX9 453 aaPredicted RBP30.6■■■□□ 2.49
DDX23-208ENST00000551098 WRNQ14191 1432 aaPredicted RBP eCLIP30.58■■■□□ 2.49
DDX23-208ENST00000551098 GAPVD1Q14C86 1478 aa30.55■■■□□ 2.48
DDX23-208ENST00000551098 MAGI1Q96QZ7 1491 aaPredicted RBP30.54■■■□□ 2.48
DDX23-208ENST00000551098 ABCA10Q8WWZ4 1543 aa30.53■■■□□ 2.48
DDX23-208ENST00000551098 RIMBP3CA6NJZ7 1639 aa30.51■■■□□ 2.48
DDX23-208ENST00000551098 RIMBP3BA6NNM3 1639 aa30.51■■■□□ 2.48
DDX23-208ENST00000551098 RIMBP3Q9UFD9 1639 aa30.51■■■□□ 2.48
DDX23-208ENST00000551098 ARHGEF11O15085 1522 aa30.49■■■□□ 2.47
DDX23-208ENST00000551098 TOP2BQ02880 1626 aa30.48■■■□□ 2.47
DDX23-208ENST00000551098 SYNJ1O43426 1573 aa30.45■■■□□ 2.47
DDX23-208ENST00000551098 BIVM-ERCC5R4GMW8 1640 aa30.44■■■□□ 2.46
DDX23-208ENST00000551098 SYNJ2O15056 1496 aa30.44■■■□□ 2.46
DDX23-208ENST00000551098 ABCA5Q8WWZ7 1642 aa30.4■■■□□ 2.46
DDX23-208ENST00000551098 PBRM1Q86U86 1689 aa30.39■■■□□ 2.46
DDX23-208ENST00000551098 CYB5RLQ6IPT4 315 aa30.38■■■□□ 2.45
DDX23-208ENST00000551098 CLASP1Q7Z460 1538 aa30.27■■■□□ 2.44
DDX23-208ENST00000551098 ARAP1Q96P48 1450 aa30.2■■■□□ 2.43
DDX23-208ENST00000551098 FHAD1B1AJZ9 1412 aa30.18■■■□□ 2.42
DDX23-208ENST00000551098 GRIN2AQ12879 1464 aa30.18■■■□□ 2.42
DDX23-208ENST00000551098 ERICH3Q5RHP9 1530 aa30.17■■■□□ 2.42
DDX23-208ENST00000551098 ADAMTS12P58397 1594 aa30.15■■■□□ 2.42
DDX23-208ENST00000551098 NUP160Q12769 1436 aa30.05■■■□□ 2.4
DDX23-208ENST00000551098 CEP170Q5SW79 1584 aa30.01■■■□□ 2.39
DDX23-208ENST00000551098 KIF27Q86VH2 1401 aa30■■■□□ 2.39
DDX23-208ENST00000551098 TRHP20396 242 aaPredicted RBP29.97■■■□□ 2.39
DDX23-208ENST00000551098 IGF1RP08069 1367 aa29.93■■■□□ 2.38
DDX23-208ENST00000551098 JPH4Q96JJ6 628 aa29.86■■■□□ 2.37
DDX23-208ENST00000551098 ERCC6L2Q5T890 1561 aa29.85■■■□□ 2.37
DDX23-208ENST00000551098 SHROOM2Q13796 1616 aa29.81■■■□□ 2.36
DDX23-208ENST00000551098 PRG4Q92954 1404 aaPredicted RBP29.8■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms