RNA–Protein interactions for RNA: ENST00000582213.5

EIF4A1-224, Transcript of eukaryotic translation initiation factor 4A1, humanhuman

TSL 4

Gene EIF4A1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A1-224ENST00000582213 AEBP2Q6ZN18 517 aaPredicted RBP21.43■■□□□ 1.02
EIF4A1-224ENST00000582213 CHIC1Q5VXU3 224 aa20.13■□□□□ 0.81
EIF4A1-224ENST00000582213 SENP3Q9H4L4 574 aaPredicted RBP18.44■□□□□ 0.54
EIF4A1-224ENST00000582213 PHF23Q9BUL5 403 aaPredicted RBP18.11■□□□□ 0.49
EIF4A1-224ENST00000582213 FOXD1Q16676 465 aa17.18■□□□□ 0.34
EIF4A1-224ENST00000582213 POTEDQ86YR6 584 aa16.56■□□□□ 0.24
EIF4A1-224ENST00000582213 MSH5O43196 834 aa16.32■□□□□ 0.2
EIF4A1-224ENST00000582213 PIAS4Q8N2W9 510 aaPredicted RBP15.96■□□□□ 0.15
EIF4A1-224ENST00000582213 PLPPR3Q6T4P5 718 aa15.83■□□□□ 0.12
EIF4A1-224ENST00000582213 PPP6R1Q9UPN7 881 aa15.71■□□□□ 0.11
EIF4A1-224ENST00000582213 ADRA2BP18089 450 aa15.64■□□□□ 0.09
EIF4A1-224ENST00000582213 DMRT2Q9Y5R5 561 aa14.54□□□□□ -0.08
EIF4A1-224ENST00000582213 MAPK8IP2Q13387 824 aaPredicted RBP14.48□□□□□ -0.09
EIF4A1-224ENST00000582213 SCAF1Q9H7N4 1312 aaKnown RBP14.44□□□□□ -0.1
EIF4A1-224ENST00000582213 CACNB1Q02641 598 aaPredicted RBP14.22□□□□□ -0.13
EIF4A1-224ENST00000582213 DCAF8L1A6NGE4 600 aa13.92□□□□□ -0.18
EIF4A1-224ENST00000582213 HOXD11P31277 338 aaPredicted RBP13.85□□□□□ -0.19
EIF4A1-224ENST00000582213 RNF39Q9H2S5 420 aa13.84□□□□□ -0.19
EIF4A1-224ENST00000582213 PPP4R3CPQ6ZMV5 832 aa13.78□□□□□ -0.2
EIF4A1-224ENST00000582213 C1QBPQ07021 282 aaKnown RBP13.66□□□□□ -0.22
EIF4A1-224ENST00000582213 CNKSR2Q8WXI2 1034 aa13.66□□□□□ -0.22
EIF4A1-224ENST00000582213 RNF216Q9NWF9 866 aaPredicted RBP13.65□□□□□ -0.22
EIF4A1-224ENST00000582213 DNAJC5BQ9UF47 199 aa13.54□□□□□ -0.24
EIF4A1-224ENST00000582213 NCBP3Q53F19 620 aaKnown RBP13.2□□□□□ -0.3
EIF4A1-224ENST00000582213 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.19□□□□□ -0.32e-9■□□□□ 9.8
EIF4A1-224ENST00000582213 NPM3O75607 178 aaKnown RBP12.92□□□□□ -0.34
EIF4A1-224ENST00000582213 POTEHQ6S545 545 aa12.92□□□□□ -0.34
EIF4A1-224ENST00000582213 U3KPZ7 1027 aaPredicted RBP12.83□□□□□ -0.36
EIF4A1-224ENST00000582213 DSG3P32926 999 aa12.82□□□□□ -0.36
EIF4A1-224ENST00000582213 CAPN15O75808 1086 aa12.79□□□□□ -0.36
EIF4A1-224ENST00000582213 SPINK5Q9NQ38 1064 aaPredicted RBP12.74□□□□□ -0.37
EIF4A1-224ENST00000582213 APLP2Q06481 763 aa12.56□□□□□ -0.4
EIF4A1-224ENST00000582213 ZNF219Q9P2Y4 722 aaPredicted RBP12.49□□□□□ -0.41
EIF4A1-224ENST00000582213 TRHP20396 242 aaPredicted RBP12.47□□□□□ -0.41
EIF4A1-224ENST00000582213 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.43□□□□□ -0.42
EIF4A1-224ENST00000582213 SLC4A2P04920 1241 aa12.43□□□□□ -0.42
EIF4A1-224ENST00000582213 HNRNPUL2Q1KMD3 747 aaKnown RBP12.43□□□□□ -0.42
EIF4A1-224ENST00000582213 ABCB7O75027 752 aa12.4□□□□□ -0.42
EIF4A1-224ENST00000582213 SAMD1Q6SPF0 538 aaPredicted RBP12.3□□□□□ -0.44
EIF4A1-224ENST00000582213 RBM42Q9BTD8 480 aaKnown RBP12.3□□□□□ -0.44
EIF4A1-224ENST00000582213 KCNA4P22459 653 aa12.27□□□□□ -0.45
EIF4A1-224ENST00000582213 CHRDL2Q6WN34 429 aa12.14□□□□□ -0.47
EIF4A1-224ENST00000582213 POLA2Q14181 598 aa12.05□□□□□ -0.48
EIF4A1-224ENST00000582213 MYCNP04198 464 aaPredicted RBP12□□□□□ -0.49
EIF4A1-224ENST00000582213 SP7Q8TDD2 431 aaPredicted RBP11.92□□□□□ -0.5
EIF4A1-224ENST00000582213 AKT1S1Q96B36 256 aa11.91□□□□□ -0.5
EIF4A1-224ENST00000582213 ZBTB12Q9Y330 459 aaPredicted RBP11.85□□□□□ -0.51
EIF4A1-224ENST00000582213 REM2Q8IYK8 340 aaPredicted RBP11.76□□□□□ -0.53
EIF4A1-224ENST00000582213 PIP4P2Q8N4L2 257 aa11.75□□□□□ -0.53
EIF4A1-224ENST00000582213 HAX1O00165 279 aa11.67□□□□□ -0.54
EIF4A1-224ENST00000582213 ATF5Q9Y2D1 282 aaPredicted RBP11.67□□□□□ -0.54
EIF4A1-224ENST00000582213 FXR2P51116 673 aaKnown RBP eCLIP11.64□□□□□ -0.55
EIF4A1-224ENST00000582213 OSCARQ8IYS5 282 aa11.64□□□□□ -0.55
EIF4A1-224ENST00000582213 FOXD4L1Q9NU39 408 aa11.63□□□□□ -0.55
EIF4A1-224ENST00000582213 PITPNM1O00562 1244 aa11.62□□□□□ -0.55
EIF4A1-224ENST00000582213 SLC4A1APQ9BWU0 796 aaKnown RBP11.54□□□□□ -0.56
EIF4A1-224ENST00000582213 EVX2Q03828 476 aa11.43□□□□□ -0.58
EIF4A1-224ENST00000582213 SPDYE2BA6NHP3 402 aa11.42□□□□□ -0.58
EIF4A1-224ENST00000582213 SPDYE6P0CI01 402 aa11.42□□□□□ -0.58
EIF4A1-224ENST00000582213 SPDYE2Q495Y8 402 aa11.42□□□□□ -0.58
EIF4A1-224ENST00000582213 ATXN8OSP0DMR3 200 aa11.38□□□□□ -0.59
EIF4A1-224ENST00000582213 FBLN2P98095 1184 aa11.35□□□□□ -0.59
EIF4A1-224ENST00000582213 PRKAR2AP13861 404 aaKnown RBP11.33□□□□□ -0.6
EIF4A1-224ENST00000582213 SPDYE1Q8NFV5 336 aaPredicted RBP11.32□□□□□ -0.6
EIF4A1-224ENST00000582213 C19orf67A6NJJ6 358 aa11.28□□□□□ -0.6
EIF4A1-224ENST00000582213 CLEC11AQ9Y240 323 aa11.27□□□□□ -0.61
EIF4A1-224ENST00000582213 ZBTB22O15209 634 aa11.24□□□□□ -0.61
EIF4A1-224ENST00000582213 GABBR2O75899 941 aa11.21□□□□□ -0.61
EIF4A1-224ENST00000582213 ZNF692Q9BU19 519 aaPredicted RBP11.19□□□□□ -0.62
EIF4A1-224ENST00000582213 SSUH2Q9Y2M2 353 aa11.19□□□□□ -0.62
EIF4A1-224ENST00000582213 LHX8Q68G74 356 aa11.17□□□□□ -0.62
EIF4A1-224ENST00000582213 MKRN4PQ13434 485 aaPredicted RBP11.13□□□□□ -0.63
EIF4A1-224ENST00000582213 PRR29P0C7W0 189 aa11.07□□□□□ -0.64
EIF4A1-224ENST00000582213 CHADLQ6NUI6 762 aa11.07□□□□□ -0.64
EIF4A1-224ENST00000582213 CLCN6P51797 869 aa11.01□□□□□ -0.65
EIF4A1-224ENST00000582213 PABPN1Q86U42 306 aaKnown RBP eCLIP10.99□□□□□ -0.65
EIF4A1-224ENST00000582213 CD44P16070 742 aaKnown RBP10.95□□□□□ -0.66
EIF4A1-224ENST00000582213 POTEIP0CG38 1075 aa10.92□□□□□ -0.66
EIF4A1-224ENST00000582213 FARP1Q9Y4F1 1045 aaPredicted RBP10.92□□□□□ -0.66
EIF4A1-224ENST00000582213 DCBLD2Q96PD2 775 aa10.84□□□□□ -0.67
EIF4A1-224ENST00000582213 ZNF579Q8NAF0 562 aaKnown RBP10.78□□□□□ -0.68
EIF4A1-224ENST00000582213 PLSCR2Q9NRY7 297 aa10.77□□□□□ -0.69
EIF4A1-224ENST00000582213 ZRANB1Q9UGI0 708 aa10.73□□□□□ -0.69
EIF4A1-224ENST00000582213 STAG3Q9UJ98 1225 aa10.68□□□□□ -0.7
EIF4A1-224ENST00000582213 CREBZFQ9NS37 354 aa10.66□□□□□ -0.7
EIF4A1-224ENST00000582213 GALR2O43603 387 aaPredicted RBP10.62□□□□□ -0.71
EIF4A1-224ENST00000582213 OTUD5Q96G74 571 aa10.62□□□□□ -0.71
EIF4A1-224ENST00000582213 PAK3O75914 559 aaPredicted RBP10.6□□□□□ -0.71
EIF4A1-224ENST00000582213 POTEB2H3BUK9 544 aa10.55□□□□□ -0.72
EIF4A1-224ENST00000582213 POTEMA6NI47 508 aa10.52□□□□□ -0.73
EIF4A1-224ENST00000582213 NPM1P06748 294 aaKnown RBP eCLIP10.52□□□□□ -0.73
EIF4A1-224ENST00000582213 PHF12Q96QT6 1004 aa10.5□□□□□ -0.73
EIF4A1-224ENST00000582213 PCDH10Q9P2E7 1040 aa10.49□□□□□ -0.73
EIF4A1-224ENST00000582213 POTEGQ6S5H5 508 aa10.48□□□□□ -0.73
EIF4A1-224ENST00000582213 PELP1Q8IZL8 1130 aaKnown RBP10.45□□□□□ -0.74
EIF4A1-224ENST00000582213 SPDYE4A6NLX3 237 aa10.43□□□□□ -0.74
EIF4A1-224ENST00000582213 C7P10643 843 aa10.43□□□□□ -0.74
EIF4A1-224ENST00000582213 ASTLQ6HA08 431 aaPredicted RBP10.43□□□□□ -0.74
EIF4A1-224ENST00000582213 MNX1P50219 401 aaPredicted RBP10.42□□□□□ -0.74
EIF4A1-224ENST00000582213 MAMSTRQ6ZN01 415 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms