RNA–Protein interactions for RNA: ENST00000476646.5

NFIA-209, Transcript of nuclear factor I A, humanhuman

TSL 3

Gene NFIA, Length 730 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIA-209ENST00000476646 AEBP2Q6ZN18 517 aaPredicted RBP13.94□□□□□ -0.18
NFIA-209ENST00000476646 CHIC1Q5VXU3 224 aa13.75□□□□□ -0.21
NFIA-209ENST00000476646 PHF23Q9BUL5 403 aaPredicted RBP12.15□□□□□ -0.46
NFIA-209ENST00000476646 SENP3Q9H4L4 574 aaPredicted RBP11.76□□□□□ -0.53
NFIA-209ENST00000476646 PLPPR3Q6T4P5 718 aa11.24□□□□□ -0.61
NFIA-209ENST00000476646 FOXD1Q16676 465 aa10.92□□□□□ -0.66
NFIA-209ENST00000476646 PPP6R1Q9UPN7 881 aa10.68□□□□□ -0.7
NFIA-209ENST00000476646 ADRA2BP18089 450 aa10.67□□□□□ -0.7
NFIA-209ENST00000476646 PIAS4Q8N2W9 510 aaPredicted RBP10.34□□□□□ -0.75
NFIA-209ENST00000476646 POTEDQ86YR6 584 aa10.15□□□□□ -0.78
NFIA-209ENST00000476646 MSH5O43196 834 aa10.13□□□□□ -0.79
NFIA-209ENST00000476646 PPP4R3CPQ6ZMV5 832 aa9.95□□□□□ -0.82
NFIA-209ENST00000476646 KCNA4P22459 653 aa9.92□□□□□ -0.82
NFIA-209ENST00000476646 NISCHQ9Y2I1 1504 aa9.85□□□□□ -0.83
NFIA-209ENST00000476646 SCAF1Q9H7N4 1312 aaKnown RBP9.73□□□□□ -0.85
NFIA-209ENST00000476646 NCBP3Q53F19 620 aaKnown RBP9.72□□□□□ -0.85
NFIA-209ENST00000476646 MAPK8IP2Q13387 824 aaPredicted RBP9.65□□□□□ -0.86
NFIA-209ENST00000476646 CNKSR2Q8WXI2 1034 aa9.62□□□□□ -0.87
NFIA-209ENST00000476646 NPM3O75607 178 aaKnown RBP9.59□□□□□ -0.87
NFIA-209ENST00000476646 SLC4A1APQ9BWU0 796 aaKnown RBP9.47□□□□□ -0.89
NFIA-209ENST00000476646 EHMT2Q96KQ7 1210 aa9.42□□□□□ -0.9
NFIA-209ENST00000476646 DMRT2Q9Y5R5 561 aa9.42□□□□□ -0.9
NFIA-209ENST00000476646 RNF216Q9NWF9 866 aaPredicted RBP9.38□□□□□ -0.91
NFIA-209ENST00000476646 HOXD11P31277 338 aaPredicted RBP9.3□□□□□ -0.92
NFIA-209ENST00000476646 DNAJC5BQ9UF47 199 aa9.24□□□□□ -0.93
NFIA-209ENST00000476646 CSRNP3Q8WYN3 585 aa9.23□□□□□ -0.93
NFIA-209ENST00000476646 ZBTB22O15209 634 aa9.14□□□□□ -0.95
NFIA-209ENST00000476646 FOXD4L1Q9NU39 408 aa9.05□□□□□ -0.96
NFIA-209ENST00000476646 DCAF8L1A6NGE4 600 aa9.04□□□□□ -0.96
NFIA-209ENST00000476646 SLC4A2P04920 1241 aa9.02□□□□□ -0.97
NFIA-209ENST00000476646 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.89□□□□□ -0.991e-14■■□□□ 11.4
NFIA-209ENST00000476646 MYCNP04198 464 aaPredicted RBP8.84□□□□□ -0.99
NFIA-209ENST00000476646 CACNB1Q02641 598 aaPredicted RBP8.83□□□□□ -1
NFIA-209ENST00000476646 U3KPZ7 1027 aaPredicted RBP8.74□□□□□ -1.01
NFIA-209ENST00000476646 ATXN8OSP0DMR3 200 aa8.72□□□□□ -1.01
NFIA-209ENST00000476646 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.67□□□□□ -1.02
NFIA-209ENST00000476646 HNRNPUL2Q1KMD3 747 aaKnown RBP8.67□□□□□ -1.02
NFIA-209ENST00000476646 SAMD1Q6SPF0 538 aaPredicted RBP8.66□□□□□ -1.02
NFIA-209ENST00000476646 RNF39Q9H2S5 420 aa8.65□□□□□ -1.02
NFIA-209ENST00000476646 ATF5Q9Y2D1 282 aaPredicted RBP8.63□□□□□ -1.03
NFIA-209ENST00000476646 CCDC180Q9P1Z9 1646 aa8.62□□□□□ -1.03
NFIA-209ENST00000476646 APLP2Q06481 763 aa8.53□□□□□ -1.04
NFIA-209ENST00000476646 C1QBPQ07021 282 aaKnown RBP8.5□□□□□ -1.05
NFIA-209ENST00000476646 SPINK5Q9NQ38 1064 aaPredicted RBP8.47□□□□□ -1.05
NFIA-209ENST00000476646 ZNF219Q9P2Y4 722 aaPredicted RBP8.47□□□□□ -1.05
NFIA-209ENST00000476646 TRHP20396 242 aaPredicted RBP8.44□□□□□ -1.06
NFIA-209ENST00000476646 CAPN15O75808 1086 aa8.42□□□□□ -1.06
NFIA-209ENST00000476646 ABCC9O60706 1549 aa8.38□□□□□ -1.07
NFIA-209ENST00000476646 POLA2Q14181 598 aa8.34□□□□□ -1.07
NFIA-209ENST00000476646 FKBP8Q14318 412 aa8.32□□□□□ -1.08
NFIA-209ENST00000476646 ABCB7O75027 752 aa8.29□□□□□ -1.08
NFIA-209ENST00000476646 ZCCHC6Q5VYS8 1495 aaKnown RBP8.29□□□□□ -1.08
NFIA-209ENST00000476646 MKRN4PQ13434 485 aaPredicted RBP8.25□□□□□ -1.09
NFIA-209ENST00000476646 DCAF8L2P0C7V8 631 aa8.23□□□□□ -1.09
NFIA-209ENST00000476646 DSG3P32926 999 aa8.23□□□□□ -1.09
NFIA-209ENST00000476646 FBLN2P98095 1184 aa8.22□□□□□ -1.09
NFIA-209ENST00000476646 SHROOM4Q9ULL8 1493 aa8.19□□□□□ -1.1
NFIA-209ENST00000476646 ZBTB12Q9Y330 459 aaPredicted RBP8.16□□□□□ -1.1
NFIA-209ENST00000476646 DCAF1Q9Y4B6 1507 aa8.16□□□□□ -1.1
NFIA-209ENST00000476646 SPDYE4A6NLX3 237 aa8.15□□□□□ -1.1
NFIA-209ENST00000476646 SUPT5HO00267 1087 aaKnown RBP8.03□□□□□ -1.12
NFIA-209ENST00000476646 OSCARQ8IYS5 282 aa8.02□□□□□ -1.13
NFIA-209ENST00000476646 PROM2Q8N271 834 aa8.01□□□□□ -1.13
NFIA-209ENST00000476646 MYO15BQ96JP2 1530 aa8□□□□□ -1.13
NFIA-209ENST00000476646 ZNF692Q9BU19 519 aaPredicted RBP8□□□□□ -1.13
NFIA-209ENST00000476646 SPDYE2BA6NHP3 402 aa7.97□□□□□ -1.13
NFIA-209ENST00000476646 SPDYE6P0CI01 402 aa7.97□□□□□ -1.13
NFIA-209ENST00000476646 SPDYE2Q495Y8 402 aa7.97□□□□□ -1.13
NFIA-209ENST00000476646 NACADO15069 1562 aa7.97□□□□□ -1.13
NFIA-209ENST00000476646 FBXO3Q9UK99 471 aa7.96□□□□□ -1.14
NFIA-209ENST00000476646 SSUH2Q9Y2M2 353 aa7.93□□□□□ -1.14
NFIA-209ENST00000476646 POTEHQ6S545 545 aa7.92□□□□□ -1.14
NFIA-209ENST00000476646 SCRIBQ14160 1630 aa7.91□□□□□ -1.14
NFIA-209ENST00000476646 RB1CC1Q8TDY2 1594 aa7.89□□□□□ -1.15
NFIA-209ENST00000476646 PABPN1Q86U42 306 aaKnown RBP eCLIP7.89□□□□□ -1.15
NFIA-209ENST00000476646 RTN4Q9NQC3 1192 aaKnown RBP7.88□□□□□ -1.15
NFIA-209ENST00000476646 AMER1Q5JTC6 1135 aaPredicted RBP7.86□□□□□ -1.15
NFIA-209ENST00000476646 VASPP50552 380 aaPredicted RBP7.85□□□□□ -1.15
NFIA-209ENST00000476646 RBM42Q9BTD8 480 aaKnown RBP7.81□□□□□ -1.16
NFIA-209ENST00000476646 STAG3Q9UJ98 1225 aa7.79□□□□□ -1.16
NFIA-209ENST00000476646 IFNLR1Q8IU57 520 aaPredicted RBP7.78□□□□□ -1.16
NFIA-209ENST00000476646 AKT1S1Q96B36 256 aa7.77□□□□□ -1.17
NFIA-209ENST00000476646 MIER1Q8N108 512 aa7.74□□□□□ -1.17
NFIA-209ENST00000476646 PLCD3Q8N3E9 789 aa7.72□□□□□ -1.17
NFIA-209ENST00000476646 REM2Q8IYK8 340 aaPredicted RBP7.71□□□□□ -1.18
NFIA-209ENST00000476646 KLHL34Q8N239 644 aa7.71□□□□□ -1.18
NFIA-209ENST00000476646 SPDYE1Q8NFV5 336 aaPredicted RBP7.7□□□□□ -1.18
NFIA-209ENST00000476646 CLEC11AQ9Y240 323 aa7.69□□□□□ -1.18
NFIA-209ENST00000476646 BAZ1AQ9NRL2 1556 aaPredicted RBP7.67□□□□□ -1.18
NFIA-209ENST00000476646 RSF1Q96T23 1441 aaPredicted RBP7.67□□□□□ -1.18
NFIA-209ENST00000476646 UNC13AQ9UPW8 1703 aa7.66□□□□□ -1.18
NFIA-209ENST00000476646 SPOCK2Q92563 424 aa7.65□□□□□ -1.18
NFIA-209ENST00000476646 PLEKHG5O94827 1062 aa7.64□□□□□ -1.19
NFIA-209ENST00000476646 PRR29P0C7W0 189 aa7.64□□□□□ -1.19
NFIA-209ENST00000476646 PITPNM1O00562 1244 aa7.62□□□□□ -1.19
NFIA-209ENST00000476646 CHRDL2Q6WN34 429 aa7.59□□□□□ -1.19
NFIA-209ENST00000476646 ZBTB47Q9UFB7 747 aaPredicted RBP7.59□□□□□ -1.19
NFIA-209ENST00000476646 PKD2Q13563 968 aa7.58□□□□□ -1.2
NFIA-209ENST00000476646 TRIM41Q8WV44 630 aa7.58□□□□□ -1.2
NFIA-209ENST00000476646 MROH2BQ7Z745 1585 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms