RNA–Protein interactions for RNA: ENST00000583899.5

EIF4A1-230, Transcript of eukaryotic translation initiation factor 4A1, humanhuman

TSL 3

Gene EIF4A1, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A1-230ENST00000583899 AEBP2Q6ZN18 517 aaPredicted RBP21.23■□□□□ 0.99
EIF4A1-230ENST00000583899 CHIC1Q5VXU3 224 aa20.28■□□□□ 0.84
EIF4A1-230ENST00000583899 SENP3Q9H4L4 574 aaPredicted RBP18.04■□□□□ 0.48
EIF4A1-230ENST00000583899 PHF23Q9BUL5 403 aaPredicted RBP17.83■□□□□ 0.44
EIF4A1-230ENST00000583899 FOXD1Q16676 465 aa16.82■□□□□ 0.28
EIF4A1-230ENST00000583899 PLPPR3Q6T4P5 718 aa16.23■□□□□ 0.19
EIF4A1-230ENST00000583899 PPP6R1Q9UPN7 881 aa15.86■□□□□ 0.13
EIF4A1-230ENST00000583899 ADRA2BP18089 450 aa15.77■□□□□ 0.12
EIF4A1-230ENST00000583899 NISCHQ9Y2I1 1504 aa15.71■□□□□ 0.11
EIF4A1-230ENST00000583899 PIAS4Q8N2W9 510 aaPredicted RBP15.7■□□□□ 0.1
EIF4A1-230ENST00000583899 MSH5O43196 834 aa15.65■□□□□ 0.1
EIF4A1-230ENST00000583899 POTEDQ86YR6 584 aa15.04■□□□□ -0
EIF4A1-230ENST00000583899 MAPK8IP2Q13387 824 aaPredicted RBP14.44□□□□□ -0.1
EIF4A1-230ENST00000583899 SCAF1Q9H7N4 1312 aaKnown RBP14.39□□□□□ -0.11
EIF4A1-230ENST00000583899 DMRT2Q9Y5R5 561 aa14.36□□□□□ -0.11
EIF4A1-230ENST00000583899 PPP4R3CPQ6ZMV5 832 aa14.25□□□□□ -0.13
EIF4A1-230ENST00000583899 CCDC180Q9P1Z9 1646 aa14.09□□□□□ -0.15
EIF4A1-230ENST00000583899 CNKSR2Q8WXI2 1034 aa13.95□□□□□ -0.18
EIF4A1-230ENST00000583899 HOXD11P31277 338 aaPredicted RBP13.9□□□□□ -0.18
EIF4A1-230ENST00000583899 RNF216Q9NWF9 866 aaPredicted RBP13.81□□□□□ -0.2
EIF4A1-230ENST00000583899 ABCC9O60706 1549 aa13.75□□□□□ -0.21
EIF4A1-230ENST00000583899 NCBP3Q53F19 620 aaKnown RBP13.71□□□□□ -0.21
EIF4A1-230ENST00000583899 DCAF8L1A6NGE4 600 aa13.61□□□□□ -0.23
EIF4A1-230ENST00000583899 NPM3O75607 178 aaKnown RBP13.58□□□□□ -0.24
EIF4A1-230ENST00000583899 KCNA4P22459 653 aa13.44□□□□□ -0.26
EIF4A1-230ENST00000583899 DNAJC5BQ9UF47 199 aa13.44□□□□□ -0.26
EIF4A1-230ENST00000583899 RNF39Q9H2S5 420 aa13.41□□□□□ -0.26
EIF4A1-230ENST00000583899 CACNB1Q02641 598 aaPredicted RBP13.29□□□□□ -0.28
EIF4A1-230ENST00000583899 RB1CC1Q8TDY2 1594 aa13.2□□□□□ -0.3
EIF4A1-230ENST00000583899 C1QBPQ07021 282 aaKnown RBP13.2□□□□□ -0.3
EIF4A1-230ENST00000583899 NACADO15069 1562 aa13.17□□□□□ -0.3
EIF4A1-230ENST00000583899 UNC13AQ9UPW8 1703 aa13.15□□□□□ -0.3
EIF4A1-230ENST00000583899 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.14□□□□□ -0.312e-9■□□□□ 9.6
EIF4A1-230ENST00000583899 ZCCHC6Q5VYS8 1495 aaKnown RBP13.1□□□□□ -0.31
EIF4A1-230ENST00000583899 MYO15BQ96JP2 1530 aa13.07□□□□□ -0.32
EIF4A1-230ENST00000583899 DCAF1Q9Y4B6 1507 aa13□□□□□ -0.33
EIF4A1-230ENST00000583899 SLC4A2P04920 1241 aa12.96□□□□□ -0.33
EIF4A1-230ENST00000583899 U3KPZ7 1027 aaPredicted RBP12.96□□□□□ -0.33
EIF4A1-230ENST00000583899 BICRAQ9NZM4 1560 aa12.94□□□□□ -0.34
EIF4A1-230ENST00000583899 DCAF8L2P0C7V8 631 aa12.91□□□□□ -0.34
EIF4A1-230ENST00000583899 SCRIBQ14160 1630 aa12.81□□□□□ -0.36
EIF4A1-230ENST00000583899 PABPN1Q86U42 306 aaKnown RBP eCLIP12.76□□□□□ -0.37
EIF4A1-230ENST00000583899 SPINK5Q9NQ38 1064 aaPredicted RBP12.71□□□□□ -0.37
EIF4A1-230ENST00000583899 SLC4A1APQ9BWU0 796 aaKnown RBP12.67□□□□□ -0.38
EIF4A1-230ENST00000583899 SHROOM4Q9ULL8 1493 aa12.65□□□□□ -0.38
EIF4A1-230ENST00000583899 CAPN15O75808 1086 aa12.61□□□□□ -0.39
EIF4A1-230ENST00000583899 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.59□□□□□ -0.39
EIF4A1-230ENST00000583899 DSG3P32926 999 aa12.59□□□□□ -0.39
EIF4A1-230ENST00000583899 HNRNPUL2Q1KMD3 747 aaKnown RBP12.59□□□□□ -0.39
EIF4A1-230ENST00000583899 SAMD1Q6SPF0 538 aaPredicted RBP12.54□□□□□ -0.4
EIF4A1-230ENST00000583899 EIF4G1Q04637 1599 aaKnown RBP12.53□□□□□ -0.4
EIF4A1-230ENST00000583899 MYCNP04198 464 aaPredicted RBP12.53□□□□□ -0.4
EIF4A1-230ENST00000583899 APLP2Q06481 763 aa12.53□□□□□ -0.4
EIF4A1-230ENST00000583899 CC2D2AQ9P2K1 1620 aa12.51□□□□□ -0.41
EIF4A1-230ENST00000583899 FOXD4L1Q9NU39 408 aa12.47□□□□□ -0.41
EIF4A1-230ENST00000583899 ZNF219Q9P2Y4 722 aaPredicted RBP12.47□□□□□ -0.41
EIF4A1-230ENST00000583899 TRHP20396 242 aaPredicted RBP12.44□□□□□ -0.42
EIF4A1-230ENST00000583899 ZBTB22O15209 634 aa12.4□□□□□ -0.42
EIF4A1-230ENST00000583899 CECR2Q9BXF3 1484 aa12.34□□□□□ -0.43
EIF4A1-230ENST00000583899 ABCB7O75027 752 aa12.34□□□□□ -0.43
EIF4A1-230ENST00000583899 SMARCA4P51532 1647 aa12.27□□□□□ -0.44
EIF4A1-230ENST00000583899 ATF5Q9Y2D1 282 aaPredicted RBP12.25□□□□□ -0.45
EIF4A1-230ENST00000583899 POLA2Q14181 598 aa12.18□□□□□ -0.46
EIF4A1-230ENST00000583899 BAZ1AQ9NRL2 1556 aaPredicted RBP12.16□□□□□ -0.46
EIF4A1-230ENST00000583899 ATAD2BQ9ULI0 1458 aa12.15□□□□□ -0.46
EIF4A1-230ENST00000583899 PEG3Q9GZU2 1588 aa12.15□□□□□ -0.46
EIF4A1-230ENST00000583899 MROH2BQ7Z745 1585 aa12.14□□□□□ -0.47
EIF4A1-230ENST00000583899 NCAPD3P42695 1498 aa12.13□□□□□ -0.47
EIF4A1-230ENST00000583899 HMGXB3Q12766 1538 aa12.12□□□□□ -0.47
EIF4A1-230ENST00000583899 SMARCA2P51531 1590 aa12.11□□□□□ -0.47
EIF4A1-230ENST00000583899 ATXN8OSP0DMR3 200 aa12.11□□□□□ -0.47
EIF4A1-230ENST00000583899 WIZO95785 1651 aa12.06□□□□□ -0.48
EIF4A1-230ENST00000583899 BAZ1BQ9UIG0 1483 aaKnown RBP12.01□□□□□ -0.49
EIF4A1-230ENST00000583899 RBM42Q9BTD8 480 aaKnown RBP11.96□□□□□ -0.49
EIF4A1-230ENST00000583899 ZBTB12Q9Y330 459 aaPredicted RBP11.95□□□□□ -0.5
EIF4A1-230ENST00000583899 NESP48681 1621 aa11.94□□□□□ -0.5
EIF4A1-230ENST00000583899 CSRNP3Q8WYN3 585 aa11.93□□□□□ -0.5
EIF4A1-230ENST00000583899 RSF1Q96T23 1441 aaPredicted RBP11.92□□□□□ -0.5
EIF4A1-230ENST00000583899 KIF21AQ7Z4S6 1674 aa11.9□□□□□ -0.5
EIF4A1-230ENST00000583899 LAMC3Q9Y6N6 1575 aa11.87□□□□□ -0.51
EIF4A1-230ENST00000583899 THOC2Q8NI27 1593 aaKnown RBP11.86□□□□□ -0.51
EIF4A1-230ENST00000583899 TOP2AP11388 1531 aaKnown RBP11.86□□□□□ -0.51
EIF4A1-230ENST00000583899 POTEHQ6S545 545 aa11.8□□□□□ -0.52
EIF4A1-230ENST00000583899 OSCARQ8IYS5 282 aa11.8□□□□□ -0.52
EIF4A1-230ENST00000583899 PRDM2Q13029 1718 aa11.8□□□□□ -0.52
EIF4A1-230ENST00000583899 ERCC6Q03468 1493 aa11.77□□□□□ -0.52
EIF4A1-230ENST00000583899 EHMT2Q96KQ7 1210 aa11.76□□□□□ -0.53
EIF4A1-230ENST00000583899 AKT1S1Q96B36 256 aa11.75□□□□□ -0.53
EIF4A1-230ENST00000583899 CUX2O14529 1486 aa11.75□□□□□ -0.53
EIF4A1-230ENST00000583899 CADPSQ9ULU8 1353 aa11.72□□□□□ -0.53
EIF4A1-230ENST00000583899 MKRN4PQ13434 485 aaPredicted RBP11.72□□□□□ -0.53
EIF4A1-230ENST00000583899 CFTRP13569 1480 aa11.7□□□□□ -0.54
EIF4A1-230ENST00000583899 FBLN2P98095 1184 aa11.69□□□□□ -0.54
EIF4A1-230ENST00000583899 CCDC88BA6NC98 1476 aa11.69□□□□□ -0.54
EIF4A1-230ENST00000583899 WDR62O43379 1518 aa11.67□□□□□ -0.54
EIF4A1-230ENST00000583899 PDS5BQ9NTI5 1447 aa11.67□□□□□ -0.54
EIF4A1-230ENST00000583899 CHRDL2Q6WN34 429 aa11.66□□□□□ -0.54
EIF4A1-230ENST00000583899 REM2Q8IYK8 340 aaPredicted RBP11.64□□□□□ -0.55
EIF4A1-230ENST00000583899 FANCD2Q9BXW9 1451 aa11.63□□□□□ -0.55
EIF4A1-230ENST00000583899 MRC2Q9UBG0 1479 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 189.8 ms