RNA–Protein interactions for RNA: ENST00000547135.5

DDX23-202, Transcript of DEAD-box helicase 23, humanhuman

TSL 2

Gene DDX23, Length 1,377 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX23-202ENST00000547135 NISCHQ9Y2I1 1504 aa27.89■■■□□ 2.06
DDX23-202ENST00000547135 CCDC180Q9P1Z9 1646 aa25.25■■□□□ 1.63
DDX23-202ENST00000547135 ABCC9O60706 1549 aa25.25■■□□□ 1.63
DDX23-202ENST00000547135 DNAJC5BQ9UF47 199 aa24.05■■□□□ 1.44
DDX23-202ENST00000547135 RB1CC1Q8TDY2 1594 aa24.04■■□□□ 1.44
DDX23-202ENST00000547135 NACADO15069 1562 aa23.84■■□□□ 1.41
DDX23-202ENST00000547135 UNC13AQ9UPW8 1703 aa23.69■■□□□ 1.38
DDX23-202ENST00000547135 MYO15BQ96JP2 1530 aa23.5■■□□□ 1.35
DDX23-202ENST00000547135 PABPN1Q86U42 306 aaKnown RBP eCLIP23.43■■□□□ 1.34
DDX23-202ENST00000547135 BICRAQ9NZM4 1560 aa23.43■■□□□ 1.34
DDX23-202ENST00000547135 DCAF8L2P0C7V8 631 aa23.36■■□□□ 1.33
DDX23-202ENST00000547135 DCAF1Q9Y4B6 1507 aa23.1■■□□□ 1.29
DDX23-202ENST00000547135 ZCCHC6Q5VYS8 1495 aaKnown RBP23.08■■□□□ 1.28
DDX23-202ENST00000547135 SHROOM4Q9ULL8 1493 aa23.08■■□□□ 1.28
DDX23-202ENST00000547135 CC2D2AQ9P2K1 1620 aa22.91■■□□□ 1.26
DDX23-202ENST00000547135 SCRIBQ14160 1630 aa22.84■■□□□ 1.25
DDX23-202ENST00000547135 EIF4G1Q04637 1599 aaKnown RBP22.8■■□□□ 1.24
DDX23-202ENST00000547135 CECR2Q9BXF3 1484 aa22.8■■□□□ 1.24
DDX23-202ENST00000547135 DNAJC5Q9H3Z4 198 aa22.32■■□□□ 1.16
DDX23-202ENST00000547135 NCAPD3P42695 1498 aa21.99■■□□□ 1.11
DDX23-202ENST00000547135 CUX2O14529 1486 aa21.94■■□□□ 1.1
DDX23-202ENST00000547135 ATAD2BQ9ULI0 1458 aa21.86■■□□□ 1.09
DDX23-202ENST00000547135 HMGXB3Q12766 1538 aa21.85■■□□□ 1.09
DDX23-202ENST00000547135 SMARCA4P51532 1647 aa21.84■■□□□ 1.09
DDX23-202ENST00000547135 SMARCA2P51531 1590 aa21.81■■□□□ 1.08
DDX23-202ENST00000547135 ERCC6Q03468 1493 aa21.79■■□□□ 1.08
DDX23-202ENST00000547135 PEG3Q9GZU2 1588 aa21.69■■□□□ 1.06
DDX23-202ENST00000547135 NESP48681 1621 aa21.67■■□□□ 1.06
DDX23-202ENST00000547135 BAZ1AQ9NRL2 1556 aaPredicted RBP21.66■■□□□ 1.06
DDX23-202ENST00000547135 THOC2Q8NI27 1593 aaKnown RBP21.61■■□□□ 1.05
DDX23-202ENST00000547135 BAZ1BQ9UIG0 1483 aaKnown RBP21.59■■□□□ 1.05
DDX23-202ENST00000547135 LAMC3Q9Y6N6 1575 aa21.56■■□□□ 1.04
DDX23-202ENST00000547135 KIF21AQ7Z4S6 1674 aa21.51■■□□□ 1.03
DDX23-202ENST00000547135 MROH2BQ7Z745 1585 aa21.47■■□□□ 1.03
DDX23-202ENST00000547135 PDS5BQ9NTI5 1447 aa21.34■■□□□ 1.01
DDX23-202ENST00000547135 WIZO95785 1651 aa21.24■□□□□ 0.99
DDX23-202ENST00000547135 CADPSQ9ULU8 1353 aa21.24■□□□□ 0.99
DDX23-202ENST00000547135 WDR62O43379 1518 aa21.23■□□□□ 0.99
DDX23-202ENST00000547135 TRIM41Q8WV44 630 aa21.23■□□□□ 0.99
DDX23-202ENST00000547135 MRC2Q9UBG0 1479 aa21.19■□□□□ 0.98
DDX23-202ENST00000547135 CEP164Q9UPV0 1460 aa21.05■□□□□ 0.96
DDX23-202ENST00000547135 CFTRP13569 1480 aa21.01■□□□□ 0.95
DDX23-202ENST00000547135 FANCD2Q9BXW9 1451 aa21.01■□□□□ 0.95
DDX23-202ENST00000547135 PRDM2Q13029 1718 aa20.98■□□□□ 0.95
DDX23-202ENST00000547135 TOP2AP11388 1531 aaKnown RBP20.93■□□□□ 0.94
DDX23-202ENST00000547135 RSF1Q96T23 1441 aaPredicted RBP20.91■□□□□ 0.94
DDX23-202ENST00000547135 URB2Q14146 1524 aaKnown RBP20.89■□□□□ 0.94
DDX23-202ENST00000547135 OSCARQ8IYS5 282 aa20.78■□□□□ 0.92
DDX23-202ENST00000547135 RIMBP3CA6NJZ7 1639 aa20.68■□□□□ 0.9
DDX23-202ENST00000547135 RIMBP3BA6NNM3 1639 aa20.68■□□□□ 0.9
DDX23-202ENST00000547135 RIMBP3Q9UFD9 1639 aa20.68■□□□□ 0.9
DDX23-202ENST00000547135 CCDC88BA6NC98 1476 aa20.66■□□□□ 0.9
DDX23-202ENST00000547135 IFT140Q96RY7 1462 aa20.66■□□□□ 0.9
DDX23-202ENST00000547135 ZNF608Q9ULD9 1512 aaPredicted RBP20.64■□□□□ 0.89
DDX23-202ENST00000547135 TOPBP1Q92547 1522 aa20.61■□□□□ 0.89
DDX23-202ENST00000547135 EIF4G3O43432 1585 aaKnown RBP20.58■□□□□ 0.89
DDX23-202ENST00000547135 ABCC8Q09428 1581 aa20.56■□□□□ 0.88
DDX23-202ENST00000547135 DNMBPQ6XZF7 1577 aa20.55■□□□□ 0.88
DDX23-202ENST00000547135 ARHGEF11O15085 1522 aa20.55■□□□□ 0.88
DDX23-202ENST00000547135 TARBP1Q13395 1621 aaKnown RBP20.55■□□□□ 0.88
DDX23-202ENST00000547135 CHD1O14646 1710 aa20.53■□□□□ 0.88
DDX23-202ENST00000547135 POLA1P09884 1462 aaPredicted RBP20.39■□□□□ 0.85
DDX23-202ENST00000547135 AQRO60306 1485 aaKnown RBP eCLIP20.38■□□□□ 0.851e-6■■□□□ 13.8
DDX23-202ENST00000547135 CYB5RLQ6IPT4 315 aa20.37■□□□□ 0.85
DDX23-202ENST00000547135 WDR97A6NE52 1622 aa20.34■□□□□ 0.85
DDX23-202ENST00000547135 ARAP1Q96P48 1450 aa20.33■□□□□ 0.84
DDX23-202ENST00000547135 RAD54L2Q9Y4B4 1467 aa20.27■□□□□ 0.84
DDX23-202ENST00000547135 TRHP20396 242 aaPredicted RBP20.27■□□□□ 0.84
DDX23-202ENST00000547135 CLASP1Q7Z460 1538 aa20.26■□□□□ 0.83
DDX23-202ENST00000547135 SOGA1O94964 1423 aa20.22■□□□□ 0.83
DDX23-202ENST00000547135 FBLN2P98095 1184 aa20.21■□□□□ 0.83
DDX23-202ENST00000547135 FGD5Q6ZNL6 1462 aa20.2■□□□□ 0.82
DDX23-202ENST00000547135 CUX1P39880 1505 aa20.2■□□□□ 0.82
DDX23-202ENST00000547135 SNAPC4Q5SXM2 1469 aa20.19■□□□□ 0.82
DDX23-202ENST00000547135 TDRD9Q8NDG6 1382 aaKnown RBP20.19■□□□□ 0.82
DDX23-202ENST00000547135 MAGI1Q96QZ7 1491 aaPredicted RBP20.17■□□□□ 0.82
DDX23-202ENST00000547135 SYNJ1O43426 1573 aa20.16■□□□□ 0.82
DDX23-202ENST00000547135 PBRM1Q86U86 1689 aa20.16■□□□□ 0.82
DDX23-202ENST00000547135 GRIN2BQ13224 1484 aa20.11■□□□□ 0.81
DDX23-202ENST00000547135 SYNJ2O15056 1496 aa20.09■□□□□ 0.81
DDX23-202ENST00000547135 ABCA5Q8WWZ7 1642 aa20.06■□□□□ 0.8
DDX23-202ENST00000547135 CHMP7Q8WUX9 453 aaPredicted RBP20.02■□□□□ 0.8
DDX23-202ENST00000547135 ABCA10Q8WWZ4 1543 aa20.01■□□□□ 0.79
DDX23-202ENST00000547135 GAPVD1Q14C86 1478 aa20.01■□□□□ 0.79
DDX23-202ENST00000547135 AEBP2Q6ZN18 517 aaPredicted RBP19.96■□□□□ 0.79
DDX23-202ENST00000547135 ADAMTS12P58397 1594 aa19.89■□□□□ 0.77
DDX23-202ENST00000547135 BIVM-ERCC5R4GMW8 1640 aa19.89■□□□□ 0.77
DDX23-202ENST00000547135 GRIN2AQ12879 1464 aa19.88■□□□□ 0.77
DDX23-202ENST00000547135 ERCC6L2Q5T890 1561 aa19.88■□□□□ 0.77
DDX23-202ENST00000547135 SHROOM2Q13796 1616 aa19.88■□□□□ 0.77
DDX23-202ENST00000547135 CEP170Q5SW79 1584 aa19.86■□□□□ 0.77
DDX23-202ENST00000547135 TOP2BQ02880 1626 aa19.85■□□□□ 0.77
DDX23-202ENST00000547135 NUP160Q12769 1436 aa19.85■□□□□ 0.77
DDX23-202ENST00000547135 WRNQ14191 1432 aaPredicted RBP eCLIP19.8■□□□□ 0.76
DDX23-202ENST00000547135 KIF13AQ9H1H9 1805 aa19.79■□□□□ 0.76
DDX23-202ENST00000547135 ERICH3Q5RHP9 1530 aa19.76■□□□□ 0.75
DDX23-202ENST00000547135 FHAD1B1AJZ9 1412 aa19.75■□□□□ 0.75
DDX23-202ENST00000547135 RUSC2Q8N2Y8 1516 aa19.63■□□□□ 0.73
DDX23-202ENST00000547135 SUPT5HO00267 1087 aaKnown RBP19.6■□□□□ 0.73
DDX23-202ENST00000547135 PRG4Q92954 1404 aaPredicted RBP19.58■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms