RNA–Protein interactions for RNA: ENST00000293831.12

EIF4A1-201, Transcript of eukaryotic translation initiation factor 4A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EIF4A1, Length 1,756 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A1-201ENST00000293831 NISCHQ9Y2I1 1504 aa35.8■■■■□ 3.32
EIF4A1-201ENST00000293831 CCDC180Q9P1Z9 1646 aa31.31■■■□□ 2.6
EIF4A1-201ENST00000293831 ZCCHC6Q5VYS8 1495 aaKnown RBP30.1■■■□□ 2.41
EIF4A1-201ENST00000293831 DCAF1Q9Y4B6 1507 aa29.67■■■□□ 2.34
EIF4A1-201ENST00000293831 ABCC9O60706 1549 aa29.42■■■□□ 2.3
EIF4A1-201ENST00000293831 DCAF8L2P0C7V8 631 aa29.38■■■□□ 2.29
EIF4A1-201ENST00000293831 MYO15BQ96JP2 1530 aa29.33■■■□□ 2.29
EIF4A1-201ENST00000293831 NACADO15069 1562 aa29.1■■■□□ 2.25
EIF4A1-201ENST00000293831 SHROOM4Q9ULL8 1493 aa29.06■■■□□ 2.24
EIF4A1-201ENST00000293831 RB1CC1Q8TDY2 1594 aa28.84■■■□□ 2.21
EIF4A1-201ENST00000293831 SCRIBQ14160 1630 aa28.68■■■□□ 2.18
EIF4A1-201ENST00000293831 UNC13AQ9UPW8 1703 aa28.27■■■□□ 2.12
EIF4A1-201ENST00000293831 SUPT5HO00267 1087 aaKnown RBP27.97■■■□□ 2.07
EIF4A1-201ENST00000293831 BICRAQ9NZM4 1560 aa27.94■■■□□ 2.06
EIF4A1-201ENST00000293831 CECR2Q9BXF3 1484 aa27.75■■■□□ 2.03
EIF4A1-201ENST00000293831 RSF1Q96T23 1441 aaPredicted RBP27.74■■■□□ 2.03
EIF4A1-201ENST00000293831 PABPN1Q86U42 306 aaKnown RBP eCLIP27.68■■■□□ 2.027e-7■□□□□ 10.9
EIF4A1-201ENST00000293831 BAZ1AQ9NRL2 1556 aaPredicted RBP27.67■■■□□ 2.02
EIF4A1-201ENST00000293831 MROH2BQ7Z745 1585 aa27.62■■■□□ 2.01
EIF4A1-201ENST00000293831 SMARCA4P51532 1647 aa27.54■■■□□ 2
EIF4A1-201ENST00000293831 WIZO95785 1651 aa27.41■■□□□ 1.98
EIF4A1-201ENST00000293831 PEG3Q9GZU2 1588 aa27.24■■□□□ 1.95
EIF4A1-201ENST00000293831 TOP2AP11388 1531 aaKnown RBP27.18■■□□□ 1.94
EIF4A1-201ENST00000293831 EIF4G1Q04637 1599 aaKnown RBP27.1■■□□□ 1.93
EIF4A1-201ENST00000293831 SMARCA2P51531 1590 aa27.08■■□□□ 1.93
EIF4A1-201ENST00000293831 ATAD2BQ9ULI0 1458 aa27.04■■□□□ 1.92
EIF4A1-201ENST00000293831 BAZ1BQ9UIG0 1483 aaKnown RBP26.9■■□□□ 1.9
EIF4A1-201ENST00000293831 CHIC1Q5VXU3 224 aa26.84■■□□□ 1.89
EIF4A1-201ENST00000293831 CCDC88BA6NC98 1476 aa26.84■■□□□ 1.89
EIF4A1-201ENST00000293831 HMGXB3Q12766 1538 aa26.84■■□□□ 1.89
EIF4A1-201ENST00000293831 NCAPD3P42695 1498 aa26.83■■□□□ 1.89
EIF4A1-201ENST00000293831 CC2D2AQ9P2K1 1620 aa26.68■■□□□ 1.86
EIF4A1-201ENST00000293831 TRIM41Q8WV44 630 aa26.35■■□□□ 1.81
EIF4A1-201ENST00000293831 ABCC8Q09428 1581 aa26.27■■□□□ 1.8
EIF4A1-201ENST00000293831 CFTRP13569 1480 aa26.23■■□□□ 1.79
EIF4A1-201ENST00000293831 PRDM2Q13029 1718 aa26.21■■□□□ 1.79
EIF4A1-201ENST00000293831 WRNQ14191 1432 aaPredicted RBP eCLIP26.13■■□□□ 1.773e-6■■■■□ 21.9
EIF4A1-201ENST00000293831 CADPSQ9ULU8 1353 aa26.11■■□□□ 1.77
EIF4A1-201ENST00000293831 SYNJ1O43426 1573 aa26.03■■□□□ 1.76
EIF4A1-201ENST00000293831 TOP2BQ02880 1626 aa25.95■■□□□ 1.75
EIF4A1-201ENST00000293831 BIVM-ERCC5R4GMW8 1640 aa25.95■■□□□ 1.75
EIF4A1-201ENST00000293831 LAMC3Q9Y6N6 1575 aa25.95■■□□□ 1.74
EIF4A1-201ENST00000293831 DNAJC5BQ9UF47 199 aa25.85■■□□□ 1.73
EIF4A1-201ENST00000293831 CUX1P39880 1505 aa25.84■■□□□ 1.73
EIF4A1-201ENST00000293831 FANCD2Q9BXW9 1451 aa25.83■■□□□ 1.73
EIF4A1-201ENST00000293831 NESP48681 1621 aa25.83■■□□□ 1.73
EIF4A1-201ENST00000293831 EEA1Q15075 1411 aa25.82■■□□□ 1.72
EIF4A1-201ENST00000293831 FAM9AQ8IZU1 332 aaPredicted RBP25.79■■□□□ 1.72
EIF4A1-201ENST00000293831 SOGA1O94964 1423 aa25.75■■□□□ 1.71
EIF4A1-201ENST00000293831 LOC105371045A0A1W2PR82 267 aa25.74■■□□□ 1.71
EIF4A1-201ENST00000293831 PDS5BQ9NTI5 1447 aa25.7■■□□□ 1.7
EIF4A1-201ENST00000293831 CEP164Q9UPV0 1460 aa25.68■■□□□ 1.7
EIF4A1-201ENST00000293831 DNMBPQ6XZF7 1577 aa25.65■■□□□ 1.7
EIF4A1-201ENST00000293831 RUSC2Q8N2Y8 1516 aa25.64■■□□□ 1.7
EIF4A1-201ENST00000293831 KIF21AQ7Z4S6 1674 aa25.6■■□□□ 1.69
EIF4A1-201ENST00000293831 CSRNP3Q8WYN3 585 aa25.58■■□□□ 1.69
EIF4A1-201ENST00000293831 TOPBP1Q92547 1522 aa25.57■■□□□ 1.68
EIF4A1-201ENST00000293831 FGD5Q6ZNL6 1462 aa25.56■■□□□ 1.68
EIF4A1-201ENST00000293831 URB2Q14146 1524 aaKnown RBP25.51■■□□□ 1.67
EIF4A1-201ENST00000293831 KIF21BO75037 1637 aa25.49■■□□□ 1.67
EIF4A1-201ENST00000293831 KIF27Q86VH2 1401 aa25.48■■□□□ 1.67
EIF4A1-201ENST00000293831 GOLGA3Q08378 1498 aa25.43■■□□□ 1.66
EIF4A1-201ENST00000293831 POLA1P09884 1462 aaPredicted RBP25.43■■□□□ 1.66
EIF4A1-201ENST00000293831 MRC2Q9UBG0 1479 aa25.38■■□□□ 1.65
EIF4A1-201ENST00000293831 CUX2O14529 1486 aa25.38■■□□□ 1.65
EIF4A1-201ENST00000293831 EHMT2Q96KQ7 1210 aa25.36■■□□□ 1.65
EIF4A1-201ENST00000293831 ABCA10Q8WWZ4 1543 aa25.36■■□□□ 1.65
EIF4A1-201ENST00000293831 TNIKQ9UKE5 1360 aa25.34■■□□□ 1.65
EIF4A1-201ENST00000293831 WDR97A6NE52 1622 aa25.32■■□□□ 1.64
EIF4A1-201ENST00000293831 ERICH3Q5RHP9 1530 aa25.32■■□□□ 1.64
EIF4A1-201ENST00000293831 PRXQ9BXM0 1461 aa25.31■■□□□ 1.64
EIF4A1-201ENST00000293831 RAD54L2Q9Y4B4 1467 aa25.3■■□□□ 1.64
EIF4A1-201ENST00000293831 WDR62O43379 1518 aa25.27■■□□□ 1.64
EIF4A1-201ENST00000293831 RAPGEF2Q9Y4G8 1499 aa25.25■■□□□ 1.63
EIF4A1-201ENST00000293831 ERCC6Q03468 1493 aa25.25■■□□□ 1.63
EIF4A1-201ENST00000293831 UBTFP17480 764 aaKnown RBP25.21■■□□□ 1.63
EIF4A1-201ENST00000293831 TARBP1Q13395 1621 aaKnown RBP25.21■■□□□ 1.63
EIF4A1-201ENST00000293831 IGF1RP08069 1367 aa25.2■■□□□ 1.63
EIF4A1-201ENST00000293831 THOC2Q8NI27 1593 aaKnown RBP25.19■■□□□ 1.62
EIF4A1-201ENST00000293831 CEP162Q5TB80 1403 aa25.19■■□□□ 1.62
EIF4A1-201ENST00000293831 ABCA5Q8WWZ7 1642 aa25.18■■□□□ 1.62
EIF4A1-201ENST00000293831 CUL7Q14999 1698 aa25.12■■□□□ 1.61
EIF4A1-201ENST00000293831 CARMIL1Q5VZK9 1371 aa25.08■■□□□ 1.61
EIF4A1-201ENST00000293831 IFT140Q96RY7 1462 aa25.08■■□□□ 1.61
EIF4A1-201ENST00000293831 GAPVD1Q14C86 1478 aa25.07■■□□□ 1.6
EIF4A1-201ENST00000293831 TDRD9Q8NDG6 1382 aaKnown RBP25.04■■□□□ 1.6
EIF4A1-201ENST00000293831 CLIP1P30622 1438 aa24.99■■□□□ 1.59
EIF4A1-201ENST00000293831 PBRM1Q86U86 1689 aa24.99■■□□□ 1.59
EIF4A1-201ENST00000293831 GRIN2BQ13224 1484 aa24.89■■□□□ 1.58
EIF4A1-201ENST00000293831 AQRO60306 1485 aaKnown RBP eCLIP24.89■■□□□ 1.572e-7■■■■□ 20.2
EIF4A1-201ENST00000293831 ZNF608Q9ULD9 1512 aaPredicted RBP24.88■■□□□ 1.57
EIF4A1-201ENST00000293831 EIF4G3O43432 1585 aaKnown RBP24.86■■□□□ 1.57
EIF4A1-201ENST00000293831 ADAMTS12P58397 1594 aa24.85■■□□□ 1.57
EIF4A1-201ENST00000293831 CTTNBP2Q8WZ74 1663 aa24.85■■□□□ 1.57
EIF4A1-201ENST00000293831 FHAD1B1AJZ9 1412 aa24.81■■□□□ 1.56
EIF4A1-201ENST00000293831 VPS8Q8N3P4 1428 aa24.8■■□□□ 1.56
EIF4A1-201ENST00000293831 ARAP1Q96P48 1450 aa24.76■■□□□ 1.55
EIF4A1-201ENST00000293831 ARHGAP35Q9NRY4 1499 aa24.74■■□□□ 1.55
EIF4A1-201ENST00000293831 RANGAP1P46060 587 aaPredicted RBP24.72■■□□□ 1.55
EIF4A1-201ENST00000293831 SNAPC4Q5SXM2 1469 aa24.7■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms