RNA–Protein interactions for RNA: ENST00000280377.9

USP15-201, Transcript of ubiquitin specific peptidase 15, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene USP15, Length 4,748 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-201ENST00000280377 NISCHQ9Y2I1 1504 aa12.4□□□□□ -0.42
USP15-201ENST00000280377 CCDC180Q9P1Z9 1646 aa10.61□□□□□ -0.71
USP15-201ENST00000280377 DCAF8L2P0C7V8 631 aa10.47□□□□□ -0.73
USP15-201ENST00000280377 SHROOM4Q9ULL8 1493 aa10.46□□□□□ -0.74
USP15-201ENST00000280377 ZCCHC6Q5VYS8 1495 aaKnown RBP10.42□□□□□ -0.74
USP15-201ENST00000280377 ABCC9O60706 1549 aa10.17□□□□□ -0.78
USP15-201ENST00000280377 SUPT5HO00267 1087 aaKnown RBP10.13□□□□□ -0.79
USP15-201ENST00000280377 DCAF1Q9Y4B6 1507 aa10.12□□□□□ -0.79
USP15-201ENST00000280377 SCRIBQ14160 1630 aa9.97□□□□□ -0.81
USP15-201ENST00000280377 MYO15BQ96JP2 1530 aa9.92□□□□□ -0.82
USP15-201ENST00000280377 NACADO15069 1562 aa9.9□□□□□ -0.83
USP15-201ENST00000280377 RB1CC1Q8TDY2 1594 aa9.8□□□□□ -0.84
USP15-201ENST00000280377 CECR2Q9BXF3 1484 aa9.74□□□□□ -0.85
USP15-201ENST00000280377 RSF1Q96T23 1441 aaPredicted RBP9.73□□□□□ -0.85
USP15-201ENST00000280377 PABPN1Q86U42 306 aaKnown RBP eCLIP9.71□□□□□ -0.85
USP15-201ENST00000280377 CHIC1Q5VXU3 224 aa9.69□□□□□ -0.86
USP15-201ENST00000280377 UNC13AQ9UPW8 1703 aa9.68□□□□□ -0.86
USP15-201ENST00000280377 EHMT2Q96KQ7 1210 aa9.67□□□□□ -0.86
USP15-201ENST00000280377 MROH2BQ7Z745 1585 aa9.66□□□□□ -0.86
USP15-201ENST00000280377 BICRAQ9NZM4 1560 aa9.58□□□□□ -0.88
USP15-201ENST00000280377 WIZO95785 1651 aa9.58□□□□□ -0.88
USP15-201ENST00000280377 BAZ1AQ9NRL2 1556 aaPredicted RBP9.52□□□□□ -0.88
USP15-201ENST00000280377 SMARCA4P51532 1647 aa9.49□□□□□ -0.89
USP15-201ENST00000280377 LOC105371045A0A1W2PR82 267 aa9.44□□□□□ -0.9
USP15-201ENST00000280377 TRIM41Q8WV44 630 aa9.42□□□□□ -0.9
USP15-201ENST00000280377 FAM9AQ8IZU1 332 aaPredicted RBP9.39□□□□□ -0.91
USP15-201ENST00000280377 CCDC88BA6NC98 1476 aa9.38□□□□□ -0.91
USP15-201ENST00000280377 TOP2AP11388 1531 aaKnown RBP9.38□□□□□ -0.91
USP15-201ENST00000280377 SMARCA2P51531 1590 aa9.34□□□□□ -0.91
USP15-201ENST00000280377 ATAD2BQ9ULI0 1458 aa9.34□□□□□ -0.91
USP15-201ENST00000280377 PEG3Q9GZU2 1588 aa9.3□□□□□ -0.92
USP15-201ENST00000280377 ABCC8Q09428 1581 aa9.29□□□□□ -0.92
USP15-201ENST00000280377 EIF4G1Q04637 1599 aaKnown RBP9.28□□□□□ -0.92
USP15-201ENST00000280377 BAZ1BQ9UIG0 1483 aaKnown RBP9.28□□□□□ -0.92
USP15-201ENST00000280377 TTBK1Q5TCY1 1321 aaPredicted RBP9.23□□□□□ -0.93
USP15-201ENST00000280377 NCAPD3P42695 1498 aa9.19□□□□□ -0.94
USP15-201ENST00000280377 PPARGC1BQ86YN6 1023 aaKnown RBP9.16□□□□□ -0.94
USP15-201ENST00000280377 SOGA1O94964 1423 aa9.16□□□□□ -0.94
USP15-201ENST00000280377 RUSC2Q8N2Y8 1516 aa9.14□□□□□ -0.95
USP15-201ENST00000280377 WRNQ14191 1432 aaPredicted RBP eCLIP9.14□□□□□ -0.95
USP15-201ENST00000280377 RANGAP1P46060 587 aaPredicted RBP9.13□□□□□ -0.95
USP15-201ENST00000280377 HMGXB3Q12766 1538 aa9.13□□□□□ -0.95
USP15-201ENST00000280377 CC2D2AQ9P2K1 1620 aa9.12□□□□□ -0.95
USP15-201ENST00000280377 PCGF6Q9BYE7 350 aa9.12□□□□□ -0.95
USP15-201ENST00000280377 DNAJC5BQ9UF47 199 aa9.11□□□□□ -0.95
USP15-201ENST00000280377 SYNJ1O43426 1573 aa9.1□□□□□ -0.95
USP15-201ENST00000280377 CSRNP3Q8WYN3 585 aa9.07□□□□□ -0.96
USP15-201ENST00000280377 CFTRP13569 1480 aa9.04□□□□□ -0.96
USP15-201ENST00000280377 UBTFP17480 764 aaKnown RBP9.02□□□□□ -0.96
USP15-201ENST00000280377 CADPSQ9ULU8 1353 aa9.01□□□□□ -0.97
USP15-201ENST00000280377 CUX1P39880 1505 aa8.99□□□□□ -0.97
USP15-201ENST00000280377 NESP48681 1621 aa8.99□□□□□ -0.97
USP15-201ENST00000280377 TOP2BQ02880 1626 aa8.98□□□□□ -0.97
USP15-201ENST00000280377 EEA1Q15075 1411 aa8.96□□□□□ -0.97
USP15-201ENST00000280377 TRIM26Q12899 539 aaPredicted RBP8.95□□□□□ -0.98
USP15-201ENST00000280377 CEP162Q5TB80 1403 aa8.94□□□□□ -0.98
USP15-201ENST00000280377 BIVM-ERCC5R4GMW8 1640 aa8.94□□□□□ -0.98
USP15-201ENST00000280377 TNIKQ9UKE5 1360 aa8.94□□□□□ -0.98
USP15-201ENST00000280377 RAPGEF2Q9Y4G8 1499 aa8.93□□□□□ -0.98
USP15-201ENST00000280377 GOLGA3Q08378 1498 aa8.92□□□□□ -0.98
USP15-201ENST00000280377 FANCD2Q9BXW9 1451 aa8.92□□□□□ -0.98
USP15-201ENST00000280377 CEP164Q9UPV0 1460 aa8.9□□□□□ -0.98
USP15-201ENST00000280377 PRDM2Q13029 1718 aa8.89□□□□□ -0.99
USP15-201ENST00000280377 FGD5Q6ZNL6 1462 aa8.88□□□□□ -0.99
USP15-201ENST00000280377 HRCP23327 699 aa8.87□□□□□ -0.99
USP15-201ENST00000280377 KIF27Q86VH2 1401 aa8.87□□□□□ -0.99
USP15-201ENST00000280377 CUX2O14529 1486 aa8.86□□□□□ -0.99
USP15-201ENST00000280377 KIF21BO75037 1637 aa8.86□□□□□ -0.99
USP15-201ENST00000280377 RAD54L2Q9Y4B4 1467 aa8.85□□□□□ -0.99
USP15-201ENST00000280377 PRXQ9BXM0 1461 aa8.84□□□□□ -0.99
USP15-201ENST00000280377 CLIP1P30622 1438 aa8.84□□□□□ -0.99
USP15-201ENST00000280377 IGF1RP08069 1367 aa8.84□□□□□ -1
USP15-201ENST00000280377 TOPBP1Q92547 1522 aa8.83□□□□□ -1
USP15-201ENST00000280377 LAMC3Q9Y6N6 1575 aa8.82□□□□□ -1
USP15-201ENST00000280377 POLA1P09884 1462 aaPredicted RBP8.81□□□□□ -1
USP15-201ENST00000280377 URB2Q14146 1524 aaKnown RBP8.81□□□□□ -1
USP15-201ENST00000280377 DNMBPQ6XZF7 1577 aa8.79□□□□□ -1
USP15-201ENST00000280377 PDS5BQ9NTI5 1447 aa8.79□□□□□ -1
USP15-201ENST00000280377 TDRD9Q8NDG6 1382 aaKnown RBP8.78□□□□□ -1
USP15-201ENST00000280377 KIF21AQ7Z4S6 1674 aa8.78□□□□□ -1
USP15-201ENST00000280377 CARMIL1Q5VZK9 1371 aa8.78□□□□□ -1
USP15-201ENST00000280377 ERICH3Q5RHP9 1530 aa8.77□□□□□ -1.01
USP15-201ENST00000280377 VPS8Q8N3P4 1428 aa8.74□□□□□ -1.01
USP15-201ENST00000280377 ABCA10Q8WWZ4 1543 aa8.74□□□□□ -1.01
USP15-201ENST00000280377 P3H3Q8IVL6 736 aa8.74□□□□□ -1.01
USP15-201ENST00000280377 ARAP1Q96P48 1450 aa8.74□□□□□ -1.01
USP15-201ENST00000280377 ATP1B4Q9UN42 357 aaPredicted RBP8.73□□□□□ -1.01
USP15-201ENST00000280377 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.72□□□□□ -1.01
USP15-201ENST00000280377 APLP2Q06481 763 aa8.71□□□□□ -1.01
USP15-201ENST00000280377 KANK4Q5T7N3 995 aaPredicted RBP8.71□□□□□ -1.02
USP15-201ENST00000280377 ARHGAP35Q9NRY4 1499 aa8.71□□□□□ -1.02
USP15-201ENST00000280377 AQRO60306 1485 aaKnown RBP eCLIP8.69□□□□□ -1.021e-7■■■□□ 17.7
USP15-201ENST00000280377 GAPVD1Q14C86 1478 aa8.68□□□□□ -1.02
USP15-201ENST00000280377 HNRNPUL2Q1KMD3 747 aaKnown RBP8.68□□□□□ -1.02
USP15-201ENST00000280377 WDR97A6NE52 1622 aa8.66□□□□□ -1.02
USP15-201ENST00000280377 MRC2Q9UBG0 1479 aa8.66□□□□□ -1.02
USP15-201ENST00000280377 TARBP1Q13395 1621 aaKnown RBP8.66□□□□□ -1.02
USP15-201ENST00000280377 ZNF608Q9ULD9 1512 aaPredicted RBP8.65□□□□□ -1.03
USP15-201ENST00000280377 ERCC6Q03468 1493 aa8.65□□□□□ -1.03
USP15-201ENST00000280377 ABCA5Q8WWZ7 1642 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms