RNA–Protein interactions for RNA: ENST00000580886.5

EIF4A1-215, Transcript of eukaryotic translation initiation factor 4A1, humanhuman

TSL 2

Gene EIF4A1, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A1-215ENST00000580886 NISCHQ9Y2I1 1504 aa23.92■■□□□ 1.42
EIF4A1-215ENST00000580886 CCDC180Q9P1Z9 1646 aa21.1■□□□□ 0.97
EIF4A1-215ENST00000580886 AEBP2Q6ZN18 517 aaPredicted RBP20.83■□□□□ 0.93
EIF4A1-215ENST00000580886 ABCC9O60706 1549 aa20.23■□□□□ 0.83
EIF4A1-215ENST00000580886 ZCCHC6Q5VYS8 1495 aaKnown RBP20■□□□□ 0.79
EIF4A1-215ENST00000580886 DCAF1Q9Y4B6 1507 aa19.91■□□□□ 0.78
EIF4A1-215ENST00000580886 MYO15BQ96JP2 1530 aa19.9■□□□□ 0.78
EIF4A1-215ENST00000580886 NACADO15069 1562 aa19.78■□□□□ 0.76
EIF4A1-215ENST00000580886 RB1CC1Q8TDY2 1594 aa19.67■□□□□ 0.74
EIF4A1-215ENST00000580886 DCAF8L2P0C7V8 631 aa19.59■□□□□ 0.73
EIF4A1-215ENST00000580886 CHIC1Q5VXU3 224 aa19.26■□□□□ 0.67
EIF4A1-215ENST00000580886 UNC13AQ9UPW8 1703 aa19.2■□□□□ 0.66
EIF4A1-215ENST00000580886 SCRIBQ14160 1630 aa19.15■□□□□ 0.66
EIF4A1-215ENST00000580886 BICRAQ9NZM4 1560 aa19.15■□□□□ 0.66
EIF4A1-215ENST00000580886 SHROOM4Q9ULL8 1493 aa19.02■□□□□ 0.63
EIF4A1-215ENST00000580886 PABPN1Q86U42 306 aaKnown RBP eCLIP18.95■□□□□ 0.62
EIF4A1-215ENST00000580886 CECR2Q9BXF3 1484 aa18.57■□□□□ 0.56
EIF4A1-215ENST00000580886 EIF4G1Q04637 1599 aaKnown RBP18.55■□□□□ 0.56
EIF4A1-215ENST00000580886 BAZ1AQ9NRL2 1556 aaPredicted RBP18.48■□□□□ 0.55
EIF4A1-215ENST00000580886 SMARCA4P51532 1647 aa18.45■□□□□ 0.54
EIF4A1-215ENST00000580886 MROH2BQ7Z745 1585 aa18.41■□□□□ 0.54
EIF4A1-215ENST00000580886 DNAJC5BQ9UF47 199 aa18.39■□□□□ 0.53
EIF4A1-215ENST00000580886 PEG3Q9GZU2 1588 aa18.38■□□□□ 0.53
EIF4A1-215ENST00000580886 CC2D2AQ9P2K1 1620 aa18.37■□□□□ 0.53
EIF4A1-215ENST00000580886 RSF1Q96T23 1441 aaPredicted RBP18.35■□□□□ 0.53
EIF4A1-215ENST00000580886 ATAD2BQ9ULI0 1458 aa18.32■□□□□ 0.52
EIF4A1-215ENST00000580886 NCAPD3P42695 1498 aa18.31■□□□□ 0.52
EIF4A1-215ENST00000580886 SMARCA2P51531 1590 aa18.26■□□□□ 0.51
EIF4A1-215ENST00000580886 HMGXB3Q12766 1538 aa18.2■□□□□ 0.5
EIF4A1-215ENST00000580886 WIZO95785 1651 aa18.17■□□□□ 0.5
EIF4A1-215ENST00000580886 BAZ1BQ9UIG0 1483 aaKnown RBP18.09■□□□□ 0.49
EIF4A1-215ENST00000580886 TOP2AP11388 1531 aaKnown RBP18.04■□□□□ 0.48
EIF4A1-215ENST00000580886 SUPT5HO00267 1087 aaKnown RBP17.91■□□□□ 0.46
EIF4A1-215ENST00000580886 CCDC88BA6NC98 1476 aa17.84■□□□□ 0.45
EIF4A1-215ENST00000580886 CADPSQ9ULU8 1353 aa17.74■□□□□ 0.43
EIF4A1-215ENST00000580886 CFTRP13569 1480 aa17.73■□□□□ 0.43
EIF4A1-215ENST00000580886 SENP3Q9H4L4 574 aaPredicted RBP17.7■□□□□ 0.42
EIF4A1-215ENST00000580886 LAMC3Q9Y6N6 1575 aa17.69■□□□□ 0.42
EIF4A1-215ENST00000580886 NESP48681 1621 aa17.64■□□□□ 0.41
EIF4A1-215ENST00000580886 PDS5BQ9NTI5 1447 aa17.55■□□□□ 0.4
EIF4A1-215ENST00000580886 PRDM2Q13029 1718 aa17.5■□□□□ 0.39
EIF4A1-215ENST00000580886 FANCD2Q9BXW9 1451 aa17.47■□□□□ 0.39
EIF4A1-215ENST00000580886 PHF23Q9BUL5 403 aaPredicted RBP17.45■□□□□ 0.38
EIF4A1-215ENST00000580886 KIF21AQ7Z4S6 1674 aa17.4■□□□□ 0.38
EIF4A1-215ENST00000580886 CEP164Q9UPV0 1460 aa17.39■□□□□ 0.37
EIF4A1-215ENST00000580886 ERCC6Q03468 1493 aa17.36■□□□□ 0.37
EIF4A1-215ENST00000580886 THOC2Q8NI27 1593 aaKnown RBP17.35■□□□□ 0.37
EIF4A1-215ENST00000580886 MRC2Q9UBG0 1479 aa17.33■□□□□ 0.37
EIF4A1-215ENST00000580886 WDR62O43379 1518 aa17.31■□□□□ 0.36
EIF4A1-215ENST00000580886 URB2Q14146 1524 aaKnown RBP17.31■□□□□ 0.36
EIF4A1-215ENST00000580886 ABCC8Q09428 1581 aa17.3■□□□□ 0.36
EIF4A1-215ENST00000580886 DNMBPQ6XZF7 1577 aa17.25■□□□□ 0.35
EIF4A1-215ENST00000580886 CUX1P39880 1505 aa17.25■□□□□ 0.35
EIF4A1-215ENST00000580886 TOPBP1Q92547 1522 aa17.25■□□□□ 0.35
EIF4A1-215ENST00000580886 WRNQ14191 1432 aaPredicted RBP eCLIP17.22■□□□□ 0.353e-6■■■■□ 21.9
EIF4A1-215ENST00000580886 CUX2O14529 1486 aa17.21■□□□□ 0.35
EIF4A1-215ENST00000580886 TOP2BQ02880 1626 aa17.18■□□□□ 0.34
EIF4A1-215ENST00000580886 BIVM-ERCC5R4GMW8 1640 aa17.18■□□□□ 0.34
EIF4A1-215ENST00000580886 SYNJ1O43426 1573 aa17.16■□□□□ 0.34
EIF4A1-215ENST00000580886 POLA1P09884 1462 aaPredicted RBP17.13■□□□□ 0.33
EIF4A1-215ENST00000580886 FGD5Q6ZNL6 1462 aa17.1■□□□□ 0.33
EIF4A1-215ENST00000580886 TARBP1Q13395 1621 aaKnown RBP17.07■□□□□ 0.32
EIF4A1-215ENST00000580886 IFT140Q96RY7 1462 aa17.06■□□□□ 0.32
EIF4A1-215ENST00000580886 SOGA1O94964 1423 aa17.04■□□□□ 0.32
EIF4A1-215ENST00000580886 ABCA10Q8WWZ4 1543 aa17.02■□□□□ 0.32
EIF4A1-215ENST00000580886 RAD54L2Q9Y4B4 1467 aa17.01■□□□□ 0.31
EIF4A1-215ENST00000580886 WDR97A6NE52 1622 aa16.98■□□□□ 0.31
EIF4A1-215ENST00000580886 TRIM41Q8WV44 630 aa16.96■□□□□ 0.31
EIF4A1-215ENST00000580886 ZNF608Q9ULD9 1512 aaPredicted RBP16.95■□□□□ 0.3
EIF4A1-215ENST00000580886 ABCA5Q8WWZ7 1642 aa16.9■□□□□ 0.3
EIF4A1-215ENST00000580886 TDRD9Q8NDG6 1382 aaKnown RBP16.88■□□□□ 0.29
EIF4A1-215ENST00000580886 AQRO60306 1485 aaKnown RBP eCLIP16.87■□□□□ 0.294e-7■■■□□ 17.5
EIF4A1-215ENST00000580886 EIF4G3O43432 1585 aaKnown RBP16.85■□□□□ 0.29
EIF4A1-215ENST00000580886 GAPVD1Q14C86 1478 aa16.85■□□□□ 0.29
EIF4A1-215ENST00000580886 KIF27Q86VH2 1401 aa16.84■□□□□ 0.29
EIF4A1-215ENST00000580886 GRIN2BQ13224 1484 aa16.82■□□□□ 0.28
EIF4A1-215ENST00000580886 ERICH3Q5RHP9 1530 aa16.81■□□□□ 0.28
EIF4A1-215ENST00000580886 IGF1RP08069 1367 aa16.81■□□□□ 0.28
EIF4A1-215ENST00000580886 RUSC2Q8N2Y8 1516 aa16.79■□□□□ 0.28
EIF4A1-215ENST00000580886 EEA1Q15075 1411 aa16.78■□□□□ 0.28
EIF4A1-215ENST00000580886 MAGI1Q96QZ7 1491 aaPredicted RBP16.76■□□□□ 0.27
EIF4A1-215ENST00000580886 PBRM1Q86U86 1689 aa16.73■□□□□ 0.27
EIF4A1-215ENST00000580886 SNAPC4Q5SXM2 1469 aa16.71■□□□□ 0.27
EIF4A1-215ENST00000580886 FHAD1B1AJZ9 1412 aa16.7■□□□□ 0.26
EIF4A1-215ENST00000580886 PRXQ9BXM0 1461 aa16.68■□□□□ 0.26
EIF4A1-215ENST00000580886 FOXD1Q16676 465 aa16.68■□□□□ 0.26
EIF4A1-215ENST00000580886 ADAMTS12P58397 1594 aa16.68■□□□□ 0.26
EIF4A1-215ENST00000580886 SYNJ2O15056 1496 aa16.67■□□□□ 0.26
EIF4A1-215ENST00000580886 CSRNP3Q8WYN3 585 aa16.67■□□□□ 0.26
EIF4A1-215ENST00000580886 CUL7Q14999 1698 aa16.66■□□□□ 0.26
EIF4A1-215ENST00000580886 CARMIL1Q5VZK9 1371 aa16.65■□□□□ 0.26
EIF4A1-215ENST00000580886 GRIN2AQ12879 1464 aa16.6■□□□□ 0.25
EIF4A1-215ENST00000580886 RAPGEF2Q9Y4G8 1499 aa16.59■□□□□ 0.25
EIF4A1-215ENST00000580886 NUP160Q12769 1436 aa16.58■□□□□ 0.24
EIF4A1-215ENST00000580886 CHMP7Q8WUX9 453 aaPredicted RBP16.56■□□□□ 0.24
EIF4A1-215ENST00000580886 KIF21BO75037 1637 aa16.55■□□□□ 0.24
EIF4A1-215ENST00000580886 CHD1O14646 1710 aa16.54■□□□□ 0.24
EIF4A1-215ENST00000580886 OSCARQ8IYS5 282 aa16.51■□□□□ 0.23
EIF4A1-215ENST00000580886 FAM9AQ8IZU1 332 aaPredicted RBP16.5■□□□□ 0.23
EIF4A1-215ENST00000580886 CEP170Q5SW79 1584 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms