RNA–Protein interactions for RNA: ENST00000308025.7

DDX23-201, Transcript of DEAD-box helicase 23, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX23, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX23-201ENST00000308025 NISCHQ9Y2I1 1504 aa20.06■□□□□ 0.8
DDX23-201ENST00000308025 HRCP23327 699 aa17.62■□□□□ 0.41
DDX23-201ENST00000308025 SHROOM4Q9ULL8 1493 aa17.43■□□□□ 0.38
DDX23-201ENST00000308025 SUPT5HO00267 1087 aaKnown RBP17.33■□□□□ 0.36
DDX23-201ENST00000308025 MYO15BQ96JP2 1530 aa17.33■□□□□ 0.36
DDX23-201ENST00000308025 CHIC1Q5VXU3 224 aa17.17■□□□□ 0.34
DDX23-201ENST00000308025 PCGF6Q9BYE7 350 aa17.17■□□□□ 0.34
DDX23-201ENST00000308025 PPARGC1BQ86YN6 1023 aaKnown RBP17.13■□□□□ 0.33
DDX23-201ENST00000308025 ZCCHC6Q5VYS8 1495 aaKnown RBP17.1■□□□□ 0.33
DDX23-201ENST00000308025 DCAF1Q9Y4B6 1507 aa17.05■□□□□ 0.32
DDX23-201ENST00000308025 PELP1Q8IZL8 1130 aaKnown RBP16.95■□□□□ 0.3
DDX23-201ENST00000308025 CCDC180Q9P1Z9 1646 aa16.87■□□□□ 0.29
DDX23-201ENST00000308025 TRIM26Q12899 539 aaPredicted RBP16.74■□□□□ 0.27
DDX23-201ENST00000308025 LOC105371045A0A1W2PR82 267 aa16.66■□□□□ 0.26
DDX23-201ENST00000308025 DCAF8L2P0C7V8 631 aa16.63■□□□□ 0.25
DDX23-201ENST00000308025 ZEB1P37275 1124 aaPredicted RBP16.63■□□□□ 0.25
DDX23-201ENST00000308025 SCAF1Q9H7N4 1312 aaKnown RBP16.59■□□□□ 0.25
DDX23-201ENST00000308025 MYT1Q01538 1121 aa16.3■□□□□ 0.2
DDX23-201ENST00000308025 ABCC9O60706 1549 aa16.27■□□□□ 0.19
DDX23-201ENST00000308025 ACIN1Q9UKV3 1341 aaKnown RBP16.23■□□□□ 0.19
DDX23-201ENST00000308025 NEUROD1Q13562 356 aa16.15■□□□□ 0.18
DDX23-201ENST00000308025 TRIM41Q8WV44 630 aa16.1■□□□□ 0.17
DDX23-201ENST00000308025 RSF1Q96T23 1441 aaPredicted RBP16.08■□□□□ 0.16
DDX23-201ENST00000308025 RB1CC1Q8TDY2 1594 aa16.04■□□□□ 0.16
DDX23-201ENST00000308025 GTF3C3Q9Y5Q9 886 aa16.03■□□□□ 0.16
DDX23-201ENST00000308025 CENPBP07199 599 aaPredicted RBP16.01■□□□□ 0.15
DDX23-201ENST00000308025 FAM9AQ8IZU1 332 aaPredicted RBP15.98■□□□□ 0.15
DDX23-201ENST00000308025 DIEXFQ68CQ4 756 aaKnown RBP15.95■□□□□ 0.14
DDX23-201ENST00000308025 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.94■□□□□ 0.14
DDX23-201ENST00000308025 CCER1Q8TC90 406 aaPredicted RBP15.92■□□□□ 0.14
DDX23-201ENST00000308025 SCRIBQ14160 1630 aa15.9■□□□□ 0.14
DDX23-201ENST00000308025 EHMT2Q96KQ7 1210 aa15.8■□□□□ 0.12
DDX23-201ENST00000308025 WRNQ14191 1432 aaPredicted RBP eCLIP15.74■□□□□ 0.11
DDX23-201ENST00000308025 EIF4G1Q04637 1599 aaKnown RBP15.7■□□□□ 0.1
DDX23-201ENST00000308025 ZNF316A6NFI3 1004 aaPredicted RBP15.69■□□□□ 0.1
DDX23-201ENST00000308025 NACADO15069 1562 aa15.67■□□□□ 0.1
DDX23-201ENST00000308025 MROH2BQ7Z745 1585 aa15.62■□□□□ 0.09
DDX23-201ENST00000308025 CECR2Q9BXF3 1484 aa15.6■□□□□ 0.09
DDX23-201ENST00000308025 WIZO95785 1651 aa15.6■□□□□ 0.09
DDX23-201ENST00000308025 CEP162Q5TB80 1403 aa15.57■□□□□ 0.08
DDX23-201ENST00000308025 YTHDC1Q96MU7 727 aaKnown RBP15.56■□□□□ 0.08
DDX23-201ENST00000308025 BAZ1AQ9NRL2 1556 aaPredicted RBP15.56■□□□□ 0.08
DDX23-201ENST00000308025 MIER1Q8N108 512 aa15.53■□□□□ 0.08
DDX23-201ENST00000308025 TNIKQ9UKE5 1360 aa15.5■□□□□ 0.07
DDX23-201ENST00000308025 TTBK1Q5TCY1 1321 aaPredicted RBP15.46■□□□□ 0.07
DDX23-201ENST00000308025 CCDC88BA6NC98 1476 aa15.45■□□□□ 0.06
DDX23-201ENST00000308025 CLSPNQ9HAW4 1339 aa15.43■□□□□ 0.06
DDX23-201ENST00000308025 ABCC8Q09428 1581 aa15.43■□□□□ 0.06
DDX23-201ENST00000308025 EEA1Q15075 1411 aa15.39■□□□□ 0.05
DDX23-201ENST00000308025 SOGA1O94964 1423 aa15.37■□□□□ 0.05
DDX23-201ENST00000308025 TOP2AP11388 1531 aaKnown RBP15.35■□□□□ 0.05
DDX23-201ENST00000308025 SUPT16HQ9Y5B9 1047 aaKnown RBP15.33■□□□□ 0.04
DDX23-201ENST00000308025 GOLGA3Q08378 1498 aa15.32■□□□□ 0.04
DDX23-201ENST00000308025 UNC13AQ9UPW8 1703 aa15.31■□□□□ 0.04
DDX23-201ENST00000308025 PABPN1Q86U42 306 aaKnown RBP eCLIP15.31■□□□□ 0.04
DDX23-201ENST00000308025 SMARCA2P51531 1590 aa15.29■□□□□ 0.04
DDX23-201ENST00000308025 CSRNP3Q8WYN3 585 aa15.29■□□□□ 0.04
DDX23-201ENST00000308025 RUSC2Q8N2Y8 1516 aa15.28■□□□□ 0.04
DDX23-201ENST00000308025 ANP32EQ9BTT0 268 aa15.26■□□□□ 0.03
DDX23-201ENST00000308025 HNRNPUL2Q1KMD3 747 aaKnown RBP15.25■□□□□ 0.03
DDX23-201ENST00000308025 UBTFP17480 764 aaKnown RBP15.24■□□□□ 0.03
DDX23-201ENST00000308025 TSHZ2Q9NRE2 1034 aa15.24■□□□□ 0.03
DDX23-201ENST00000308025 KIF21BO75037 1637 aa15.21■□□□□ 0.03
DDX23-201ENST00000308025 SMARCA4P51532 1647 aa15.19■□□□□ 0.02
DDX23-201ENST00000308025 VPS8Q8N3P4 1428 aa15.18■□□□□ 0.02
DDX23-201ENST00000308025 CEP164Q9UPV0 1460 aa15.17■□□□□ 0.02
DDX23-201ENST00000308025 BCL11AQ9H165 835 aa15.15■□□□□ 0.02
DDX23-201ENST00000308025 CLIP1P30622 1438 aa15.15■□□□□ 0.02
DDX23-201ENST00000308025 BICRAQ9NZM4 1560 aa15.13■□□□□ 0.01
DDX23-201ENST00000308025 DHX57Q6P158 1386 aaKnown RBP15.12■□□□□ 0.01
DDX23-201ENST00000308025 BAZ1BQ9UIG0 1483 aaKnown RBP15.1■□□□□ 0.01
DDX23-201ENST00000308025 SYNJ1O43426 1573 aa15.03■□□□□ -0
DDX23-201ENST00000308025 APLP2Q06481 763 aa15.02□□□□□ -0.01
DDX23-201ENST00000308025 RAPGEF2Q9Y4G8 1499 aa14.98□□□□□ -0.01
DDX23-201ENST00000308025 CUX2O14529 1486 aa14.98□□□□□ -0.01
DDX23-201ENST00000308025 RRBP1Q9P2E9 1410 aaKnown RBP14.93□□□□□ -0.02
DDX23-201ENST00000308025 KCNH8Q96L42 1107 aa14.9□□□□□ -0.02
DDX23-201ENST00000308025 PEG3Q9GZU2 1588 aa14.88□□□□□ -0.03
DDX23-201ENST00000308025 RBM19Q9Y4C8 960 aaKnown RBP14.88□□□□□ -0.03
DDX23-201ENST00000308025 FKBP8Q14318 412 aa14.88□□□□□ -0.03
DDX23-201ENST00000308025 BCANQ96GW7 911 aa14.88□□□□□ -0.03
DDX23-201ENST00000308025 ARAP1Q96P48 1450 aa14.88□□□□□ -0.03
DDX23-201ENST00000308025 ERICH3Q5RHP9 1530 aa14.85□□□□□ -0.03
DDX23-201ENST00000308025 MAPKBP1O60336 1514 aa14.83□□□□□ -0.04
DDX23-201ENST00000308025 KANK4Q5T7N3 995 aaPredicted RBP14.81□□□□□ -0.04
DDX23-201ENST00000308025 ATAD2BQ9ULI0 1458 aa14.8□□□□□ -0.04
DDX23-201ENST00000308025 TOP2BQ02880 1626 aa14.8□□□□□ -0.04
DDX23-201ENST00000308025 CCNB3Q8WWL7 1395 aa14.78□□□□□ -0.04
DDX23-201ENST00000308025 PRXQ9BXM0 1461 aa14.78□□□□□ -0.04
DDX23-201ENST00000308025 NEFLP07196 543 aa14.77□□□□□ -0.04
DDX23-201ENST00000308025 BIVM-ERCC5R4GMW8 1640 aa14.76□□□□□ -0.05
DDX23-201ENST00000308025 RANGAP1P46060 587 aaPredicted RBP14.76□□□□□ -0.05
DDX23-201ENST00000308025 WDR97A6NE52 1622 aa14.75□□□□□ -0.05
DDX23-201ENST00000308025 MSH5O43196 834 aa14.75□□□□□ -0.05
DDX23-201ENST00000308025 RAB3GAP2Q9H2M9 1393 aa14.73□□□□□ -0.05
DDX23-201ENST00000308025 CCER2I3L3R5 266 aa14.72□□□□□ -0.05
DDX23-201ENST00000308025 PPP1R15AO75807 674 aaPredicted RBP14.72□□□□□ -0.05
DDX23-201ENST00000308025 DDX10Q13206 875 aaKnown RBP14.71□□□□□ -0.05
DDX23-201ENST00000308025 FANCIQ9NVI1 1328 aa14.71□□□□□ -0.06
DDX23-201ENST00000308025 ITGAEP38570 1179 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms