RNA–Protein interactions for RNA: ENST00000464398.1

SMYD3-208, Transcript of SET and MYND domain containing 3, humanhuman

TSL 3

Gene SMYD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMYD3-208ENST00000464398 NISCHQ9Y2I1 1504 aa19.5■□□□□ 0.71
SMYD3-208ENST00000464398 CCDC180Q9P1Z9 1646 aa17.32■□□□□ 0.36
SMYD3-208ENST00000464398 ABCC9O60706 1549 aa16.56■□□□□ 0.24
SMYD3-208ENST00000464398 ZCCHC6Q5VYS8 1495 aaKnown RBP16.34■□□□□ 0.21
SMYD3-208ENST00000464398 DCAF1Q9Y4B6 1507 aa16.16■□□□□ 0.18
SMYD3-208ENST00000464398 NACADO15069 1562 aa16.12■□□□□ 0.17
SMYD3-208ENST00000464398 MYO15BQ96JP2 1530 aa16.11■□□□□ 0.17
SMYD3-208ENST00000464398 RB1CC1Q8TDY2 1594 aa16.08■□□□□ 0.16
SMYD3-208ENST00000464398 DNAJC5BQ9UF47 199 aa16.04■□□□□ 0.16
SMYD3-208ENST00000464398 DCAF8L2P0C7V8 631 aa15.97■□□□□ 0.15
SMYD3-208ENST00000464398 UNC13AQ9UPW8 1703 aa15.87■□□□□ 0.13
SMYD3-208ENST00000464398 SCRIBQ14160 1630 aa15.78■□□□□ 0.12
SMYD3-208ENST00000464398 BICRAQ9NZM4 1560 aa15.65■□□□□ 0.1
SMYD3-208ENST00000464398 DNAJC5Q9H3Z4 198 aa15.55■□□□□ 0.08
SMYD3-208ENST00000464398 SHROOM4Q9ULL8 1493 aa15.5■□□□□ 0.07
SMYD3-208ENST00000464398 AEBP2Q6ZN18 517 aaPredicted RBP15.46■□□□□ 0.07
SMYD3-208ENST00000464398 PABPN1Q86U42 306 aaKnown RBP eCLIP15.43■□□□□ 0.06
SMYD3-208ENST00000464398 CHIC1Q5VXU3 224 aa15.29■□□□□ 0.04
SMYD3-208ENST00000464398 EIF4G1Q04637 1599 aaKnown RBP15.18■□□□□ 0.02
SMYD3-208ENST00000464398 CECR2Q9BXF3 1484 aa15.14■□□□□ 0.01
SMYD3-208ENST00000464398 SMARCA4P51532 1647 aa15.13■□□□□ 0.01
SMYD3-208ENST00000464398 BAZ1AQ9NRL2 1556 aaPredicted RBP15.1■□□□□ 0.01
SMYD3-208ENST00000464398 CC2D2AQ9P2K1 1620 aa15.05■□□□□ -0
SMYD3-208ENST00000464398 MROH2BQ7Z745 1585 aa15.04■□□□□ -0
SMYD3-208ENST00000464398 PEG3Q9GZU2 1588 aa14.97□□□□□ -0.01
SMYD3-208ENST00000464398 WIZO95785 1651 aa14.94□□□□□ -0.02
SMYD3-208ENST00000464398 RSF1Q96T23 1441 aaPredicted RBP14.92□□□□□ -0.02
SMYD3-208ENST00000464398 SMARCA2P51531 1590 aa14.91□□□□□ -0.02
SMYD3-208ENST00000464398 ATAD2BQ9ULI0 1458 aa14.9□□□□□ -0.02
SMYD3-208ENST00000464398 HMGXB3Q12766 1538 aa14.86□□□□□ -0.03
SMYD3-208ENST00000464398 NCAPD3P42695 1498 aa14.82□□□□□ -0.04
SMYD3-208ENST00000464398 BAZ1BQ9UIG0 1483 aaKnown RBP14.8□□□□□ -0.04
SMYD3-208ENST00000464398 TOP2AP11388 1531 aaKnown RBP14.77□□□□□ -0.04
SMYD3-208ENST00000464398 SUPT5HO00267 1087 aaKnown RBP14.63□□□□□ -0.07
SMYD3-208ENST00000464398 CCDC88BA6NC98 1476 aa14.54□□□□□ -0.08
SMYD3-208ENST00000464398 PRDM2Q13029 1718 aa14.49□□□□□ -0.09
SMYD3-208ENST00000464398 LAMC3Q9Y6N6 1575 aa14.45□□□□□ -0.1
SMYD3-208ENST00000464398 NESP48681 1621 aa14.44□□□□□ -0.1
SMYD3-208ENST00000464398 CFTRP13569 1480 aa14.4□□□□□ -0.1
SMYD3-208ENST00000464398 CADPSQ9ULU8 1353 aa14.37□□□□□ -0.11
SMYD3-208ENST00000464398 KIF21AQ7Z4S6 1674 aa14.37□□□□□ -0.11
SMYD3-208ENST00000464398 TRIM41Q8WV44 630 aa14.36□□□□□ -0.11
SMYD3-208ENST00000464398 FANCD2Q9BXW9 1451 aa14.26□□□□□ -0.13
SMYD3-208ENST00000464398 PDS5BQ9NTI5 1447 aa14.25□□□□□ -0.13
SMYD3-208ENST00000464398 THOC2Q8NI27 1593 aaKnown RBP14.25□□□□□ -0.13
SMYD3-208ENST00000464398 CEP164Q9UPV0 1460 aa14.23□□□□□ -0.13
SMYD3-208ENST00000464398 ERCC6Q03468 1493 aa14.22□□□□□ -0.13
SMYD3-208ENST00000464398 MRC2Q9UBG0 1479 aa14.16□□□□□ -0.14
SMYD3-208ENST00000464398 ABCC8Q09428 1581 aa14.15□□□□□ -0.14
SMYD3-208ENST00000464398 WDR62O43379 1518 aa14.15□□□□□ -0.14
SMYD3-208ENST00000464398 URB2Q14146 1524 aaKnown RBP14.15□□□□□ -0.14
SMYD3-208ENST00000464398 DNMBPQ6XZF7 1577 aa14.13□□□□□ -0.15
SMYD3-208ENST00000464398 CUX1P39880 1505 aa14.11□□□□□ -0.15
SMYD3-208ENST00000464398 SYNJ1O43426 1573 aa14.11□□□□□ -0.15
SMYD3-208ENST00000464398 BIVM-ERCC5R4GMW8 1640 aa14.11□□□□□ -0.15
SMYD3-208ENST00000464398 TOPBP1Q92547 1522 aa14.09□□□□□ -0.15
SMYD3-208ENST00000464398 TOP2BQ02880 1626 aa14.08□□□□□ -0.16
SMYD3-208ENST00000464398 WRNQ14191 1432 aaPredicted RBP eCLIP14.05□□□□□ -0.165e-6■■■■■ 29.2
SMYD3-208ENST00000464398 CUX2O14529 1486 aa14.01□□□□□ -0.17
SMYD3-208ENST00000464398 WDR97A6NE52 1622 aa14□□□□□ -0.17
SMYD3-208ENST00000464398 FGD5Q6ZNL6 1462 aa13.99□□□□□ -0.17
SMYD3-208ENST00000464398 POLA1P09884 1462 aaPredicted RBP13.99□□□□□ -0.17
SMYD3-208ENST00000464398 TARBP1Q13395 1621 aaKnown RBP13.97□□□□□ -0.17
SMYD3-208ENST00000464398 RAD54L2Q9Y4B4 1467 aa13.9□□□□□ -0.18
SMYD3-208ENST00000464398 IFT140Q96RY7 1462 aa13.89□□□□□ -0.19
SMYD3-208ENST00000464398 EIF4G3O43432 1585 aaKnown RBP13.88□□□□□ -0.19
SMYD3-208ENST00000464398 ABCA5Q8WWZ7 1642 aa13.87□□□□□ -0.19
SMYD3-208ENST00000464398 ABCA10Q8WWZ4 1543 aa13.86□□□□□ -0.19
SMYD3-208ENST00000464398 SOGA1O94964 1423 aa13.85□□□□□ -0.19
SMYD3-208ENST00000464398 PBRM1Q86U86 1689 aa13.85□□□□□ -0.19
SMYD3-208ENST00000464398 ZNF608Q9ULD9 1512 aaPredicted RBP13.85□□□□□ -0.19
SMYD3-208ENST00000464398 AQRO60306 1485 aaKnown RBP eCLIP13.75□□□□□ -0.212e-7■■■■□ 26.1
SMYD3-208ENST00000464398 TDRD9Q8NDG6 1382 aaKnown RBP13.74□□□□□ -0.21
SMYD3-208ENST00000464398 GAPVD1Q14C86 1478 aa13.74□□□□□ -0.21
SMYD3-208ENST00000464398 RUSC2Q8N2Y8 1516 aa13.73□□□□□ -0.21
SMYD3-208ENST00000464398 ADAMTS12P58397 1594 aa13.71□□□□□ -0.21
SMYD3-208ENST00000464398 ERICH3Q5RHP9 1530 aa13.71□□□□□ -0.21
SMYD3-208ENST00000464398 KIF27Q86VH2 1401 aa13.71□□□□□ -0.22
SMYD3-208ENST00000464398 GRIN2BQ13224 1484 aa13.7□□□□□ -0.22
SMYD3-208ENST00000464398 CUL7Q14999 1698 aa13.69□□□□□ -0.22
SMYD3-208ENST00000464398 SNAPC4Q5SXM2 1469 aa13.68□□□□□ -0.22
SMYD3-208ENST00000464398 CHD1O14646 1710 aa13.68□□□□□ -0.22
SMYD3-208ENST00000464398 MAGI1Q96QZ7 1491 aaPredicted RBP13.66□□□□□ -0.22
SMYD3-208ENST00000464398 EEA1Q15075 1411 aa13.64□□□□□ -0.23
SMYD3-208ENST00000464398 IGF1RP08069 1367 aa13.6□□□□□ -0.23
SMYD3-208ENST00000464398 SYNJ2O15056 1496 aa13.6□□□□□ -0.23
SMYD3-208ENST00000464398 KIF21BO75037 1637 aa13.58□□□□□ -0.24
SMYD3-208ENST00000464398 FHAD1B1AJZ9 1412 aa13.57□□□□□ -0.24
SMYD3-208ENST00000464398 PRXQ9BXM0 1461 aa13.56□□□□□ -0.24
SMYD3-208ENST00000464398 ILDR1Q86SU0 546 aaPredicted RBP13.56□□□□□ -0.24
SMYD3-208ENST00000464398 GRIN2AQ12879 1464 aa13.55□□□□□ -0.24
SMYD3-208ENST00000464398 CEP170Q5SW79 1584 aa13.53□□□□□ -0.24
SMYD3-208ENST00000464398 CTTNBP2Q8WZ74 1663 aa13.53□□□□□ -0.24
SMYD3-208ENST00000464398 FAM9AQ8IZU1 332 aaPredicted RBP13.52□□□□□ -0.25
SMYD3-208ENST00000464398 CARMIL1Q5VZK9 1371 aa13.52□□□□□ -0.25
SMYD3-208ENST00000464398 RAPGEF2Q9Y4G8 1499 aa13.52□□□□□ -0.25
SMYD3-208ENST00000464398 CSRNP3Q8WYN3 585 aa13.49□□□□□ -0.25
SMYD3-208ENST00000464398 CLASP1Q7Z460 1538 aa13.49□□□□□ -0.25
SMYD3-208ENST00000464398 NUP160Q12769 1436 aa13.48□□□□□ -0.25
SMYD3-208ENST00000464398 GOLGA3Q08378 1498 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms