Protein–RNA interactions for Protein: Q9Y5A7

NUB1, NEDD8 ultimate buster 1, humanhuman

Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUB1Q9Y5A7 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC28.62■■■□□ 2.17
NUB1Q9Y5A7 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC28.62■■■□□ 2.17
NUB1Q9Y5A7 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
NUB1Q9Y5A7 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC28.6■■■□□ 2.17
NUB1Q9Y5A7 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
NUB1Q9Y5A7 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC28.6■■■□□ 2.17
NUB1Q9Y5A7 AC108673.1-201ENST00000510422 1159 ntBASIC28.59■■■□□ 2.17
NUB1Q9Y5A7 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.16
NUB1Q9Y5A7 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
NUB1Q9Y5A7 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC28.57■■■□□ 2.16
NUB1Q9Y5A7 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
NUB1Q9Y5A7 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
NUB1Q9Y5A7 MIR7108-201ENST00000614319 87 ntBASIC28.56■■■□□ 2.16
NUB1Q9Y5A7 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC28.55■■■□□ 2.16
NUB1Q9Y5A7 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
NUB1Q9Y5A7 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
NUB1Q9Y5A7 CIB2-204ENST00000557846 934 ntTSL 3 BASIC28.55■■■□□ 2.16
NUB1Q9Y5A7 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC28.54■■■□□ 2.16
NUB1Q9Y5A7 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
NUB1Q9Y5A7 DUX4L29-201ENST00000425409 679 ntBASIC28.53■■■□□ 2.16
NUB1Q9Y5A7 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
NUB1Q9Y5A7 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC28.53■■■□□ 2.16
NUB1Q9Y5A7 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC28.52■■■□□ 2.16
NUB1Q9Y5A7 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC28.52■■■□□ 2.16
NUB1Q9Y5A7 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC28.52■■■□□ 2.16
NUB1Q9Y5A7 MIR6090-201ENST00000622481 60 ntBASIC28.52■■■□□ 2.16
NUB1Q9Y5A7 HGH1-207ENST00000628266 258 ntTSL 5 BASIC28.51■■■□□ 2.15
NUB1Q9Y5A7 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC28.51■■■□□ 2.15
NUB1Q9Y5A7 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
NUB1Q9Y5A7 AL135925.1-201ENST00000605920 1701 ntBASIC28.5■■■□□ 2.15
NUB1Q9Y5A7 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC28.49■■■□□ 2.15
NUB1Q9Y5A7 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC28.49■■■□□ 2.15
NUB1Q9Y5A7 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC28.49■■■□□ 2.15
NUB1Q9Y5A7 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC28.48■■■□□ 2.15
NUB1Q9Y5A7 ZNRF2P2-203ENST00000454624 420 ntBASIC28.48■■■□□ 2.15
NUB1Q9Y5A7 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC28.48■■■□□ 2.15
NUB1Q9Y5A7 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC28.48■■■□□ 2.15
NUB1Q9Y5A7 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
NUB1Q9Y5A7 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC28.47■■■□□ 2.15
NUB1Q9Y5A7 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
NUB1Q9Y5A7 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
NUB1Q9Y5A7 ABCB10P1-201ENST00000614297 2181 ntBASIC28.45■■■□□ 2.15
NUB1Q9Y5A7 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC28.45■■■□□ 2.14
NUB1Q9Y5A7 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC28.45■■■□□ 2.14
NUB1Q9Y5A7 PVT1-219ENST00000523427 938 ntTSL 3 BASIC28.44■■■□□ 2.14
NUB1Q9Y5A7 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC28.44■■■□□ 2.14
NUB1Q9Y5A7 AC021231.2-201ENST00000594613 730 ntBASIC28.44■■■□□ 2.14
NUB1Q9Y5A7 ST7-AS1-201ENST00000456775 1889 ntBASIC28.43■■■□□ 2.14
NUB1Q9Y5A7 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
NUB1Q9Y5A7 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC28.43■■■□□ 2.14
NUB1Q9Y5A7 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC28.43■■■□□ 2.14
NUB1Q9Y5A7 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC28.43■■■□□ 2.14
NUB1Q9Y5A7 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC28.42■■■□□ 2.14
NUB1Q9Y5A7 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
NUB1Q9Y5A7 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
NUB1Q9Y5A7 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
NUB1Q9Y5A7 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC28.41■■■□□ 2.14
NUB1Q9Y5A7 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC28.41■■■□□ 2.14
NUB1Q9Y5A7 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
NUB1Q9Y5A7 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
NUB1Q9Y5A7 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
NUB1Q9Y5A7 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC28.4■■■□□ 2.14
NUB1Q9Y5A7 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC28.4■■■□□ 2.14
NUB1Q9Y5A7 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC28.4■■■□□ 2.14
NUB1Q9Y5A7 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC28.4■■■□□ 2.14
NUB1Q9Y5A7 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
NUB1Q9Y5A7 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
NUB1Q9Y5A7 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC28.39■■■□□ 2.14
NUB1Q9Y5A7 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
NUB1Q9Y5A7 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC28.39■■■□□ 2.14
NUB1Q9Y5A7 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC28.38■■■□□ 2.13
NUB1Q9Y5A7 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
NUB1Q9Y5A7 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
NUB1Q9Y5A7 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
NUB1Q9Y5A7 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
NUB1Q9Y5A7 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC28.36■■■□□ 2.13
NUB1Q9Y5A7 AC010864.1-201ENST00000609407 1511 ntBASIC28.36■■■□□ 2.13
NUB1Q9Y5A7 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
NUB1Q9Y5A7 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
NUB1Q9Y5A7 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC28.34■■■□□ 2.13
NUB1Q9Y5A7 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC28.34■■■□□ 2.13
NUB1Q9Y5A7 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
NUB1Q9Y5A7 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC28.34■■■□□ 2.13
NUB1Q9Y5A7 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
NUB1Q9Y5A7 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
NUB1Q9Y5A7 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
NUB1Q9Y5A7 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC28.3■■■□□ 2.12
NUB1Q9Y5A7 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
NUB1Q9Y5A7 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC28.29■■■□□ 2.12
NUB1Q9Y5A7 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
NUB1Q9Y5A7 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC28.29■■■□□ 2.12
NUB1Q9Y5A7 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC28.28■■■□□ 2.12
NUB1Q9Y5A7 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC28.28■■■□□ 2.12
NUB1Q9Y5A7 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC28.27■■■□□ 2.12
NUB1Q9Y5A7 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC28.27■■■□□ 2.12
NUB1Q9Y5A7 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC28.26■■■□□ 2.11
NUB1Q9Y5A7 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC28.26■■■□□ 2.11
NUB1Q9Y5A7 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
NUB1Q9Y5A7 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
NUB1Q9Y5A7 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms