Protein–RNA interactions for Protein: Q9Y3Q8

TSC22D4, TSC22 domain family protein 4, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D4Q9Y3Q8 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
TSC22D4Q9Y3Q8 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
TSC22D4Q9Y3Q8 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC25.26■■□□□ 1.64
TSC22D4Q9Y3Q8 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
TSC22D4Q9Y3Q8 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC25.26■■□□□ 1.63
TSC22D4Q9Y3Q8 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
TSC22D4Q9Y3Q8 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
TSC22D4Q9Y3Q8 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
TSC22D4Q9Y3Q8 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC25.25■■□□□ 1.63
TSC22D4Q9Y3Q8 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC25.25■■□□□ 1.63
TSC22D4Q9Y3Q8 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
TSC22D4Q9Y3Q8 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
TSC22D4Q9Y3Q8 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
TSC22D4Q9Y3Q8 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
TSC22D4Q9Y3Q8 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
TSC22D4Q9Y3Q8 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
TSC22D4Q9Y3Q8 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC25.24■■□□□ 1.63
TSC22D4Q9Y3Q8 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
TSC22D4Q9Y3Q8 MIR762-201ENST00000390236 83 ntBASIC25.23■■□□□ 1.63
TSC22D4Q9Y3Q8 CHML-205ENST00000638160 705 ntTSL 3 BASIC25.23■■□□□ 1.63
TSC22D4Q9Y3Q8 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC25.22■■□□□ 1.63
TSC22D4Q9Y3Q8 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
TSC22D4Q9Y3Q8 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC25.21■■□□□ 1.63
TSC22D4Q9Y3Q8 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC25.21■■□□□ 1.63
TSC22D4Q9Y3Q8 ABCB10P3-201ENST00000561950 2166 ntBASIC25.21■■□□□ 1.63
TSC22D4Q9Y3Q8 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
TSC22D4Q9Y3Q8 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC25.2■■□□□ 1.62
TSC22D4Q9Y3Q8 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC25.2■■□□□ 1.62
TSC22D4Q9Y3Q8 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC25.2■■□□□ 1.62
TSC22D4Q9Y3Q8 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC25.2■■□□□ 1.62
TSC22D4Q9Y3Q8 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
TSC22D4Q9Y3Q8 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC25.19■■□□□ 1.62
TSC22D4Q9Y3Q8 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
TSC22D4Q9Y3Q8 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
TSC22D4Q9Y3Q8 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC25.18■■□□□ 1.62
TSC22D4Q9Y3Q8 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
TSC22D4Q9Y3Q8 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
TSC22D4Q9Y3Q8 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
TSC22D4Q9Y3Q8 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC25.18■■□□□ 1.62
TSC22D4Q9Y3Q8 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
TSC22D4Q9Y3Q8 HNRNPLP2-201ENST00000568980 1570 ntBASIC25.17■■□□□ 1.62
TSC22D4Q9Y3Q8 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
TSC22D4Q9Y3Q8 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC25.16■■□□□ 1.62
TSC22D4Q9Y3Q8 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC25.15■■□□□ 1.62
TSC22D4Q9Y3Q8 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
TSC22D4Q9Y3Q8 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC25.15■■□□□ 1.62
TSC22D4Q9Y3Q8 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
TSC22D4Q9Y3Q8 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC25.14■■□□□ 1.62
TSC22D4Q9Y3Q8 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
TSC22D4Q9Y3Q8 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
TSC22D4Q9Y3Q8 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
TSC22D4Q9Y3Q8 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
TSC22D4Q9Y3Q8 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC25.14■■□□□ 1.62
TSC22D4Q9Y3Q8 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
TSC22D4Q9Y3Q8 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.61
TSC22D4Q9Y3Q8 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC25.13■■□□□ 1.61
TSC22D4Q9Y3Q8 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC25.13■■□□□ 1.61
TSC22D4Q9Y3Q8 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
TSC22D4Q9Y3Q8 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC25.12■■□□□ 1.61
TSC22D4Q9Y3Q8 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
TSC22D4Q9Y3Q8 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
TSC22D4Q9Y3Q8 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
TSC22D4Q9Y3Q8 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC25.11■■□□□ 1.61
TSC22D4Q9Y3Q8 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
TSC22D4Q9Y3Q8 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC25.1■■□□□ 1.61
TSC22D4Q9Y3Q8 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
TSC22D4Q9Y3Q8 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
TSC22D4Q9Y3Q8 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
TSC22D4Q9Y3Q8 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC25.09■■□□□ 1.61
TSC22D4Q9Y3Q8 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC25.08■■□□□ 1.61
TSC22D4Q9Y3Q8 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC25.08■■□□□ 1.61
TSC22D4Q9Y3Q8 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
TSC22D4Q9Y3Q8 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
TSC22D4Q9Y3Q8 AC005559.1-201ENST00000589661 871 ntBASIC25.08■■□□□ 1.61
TSC22D4Q9Y3Q8 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
TSC22D4Q9Y3Q8 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
TSC22D4Q9Y3Q8 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
TSC22D4Q9Y3Q8 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
TSC22D4Q9Y3Q8 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC25.07■■□□□ 1.6
TSC22D4Q9Y3Q8 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
TSC22D4Q9Y3Q8 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC25.05■■□□□ 1.6
TSC22D4Q9Y3Q8 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
TSC22D4Q9Y3Q8 RPS2-209ENST00000529806 993 ntTSL 3 BASIC25.04■■□□□ 1.6
TSC22D4Q9Y3Q8 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
TSC22D4Q9Y3Q8 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC25.03■■□□□ 1.6
TSC22D4Q9Y3Q8 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC25.03■■□□□ 1.6
TSC22D4Q9Y3Q8 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC25.03■■□□□ 1.6
TSC22D4Q9Y3Q8 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC25.02■■□□□ 1.6
TSC22D4Q9Y3Q8 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
TSC22D4Q9Y3Q8 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC25.01■■□□□ 1.59
TSC22D4Q9Y3Q8 AP006261.1-201ENST00000584783 668 ntBASIC25.01■■□□□ 1.59
TSC22D4Q9Y3Q8 AL139393.2-201ENST00000608721 2025 ntBASIC25.01■■□□□ 1.59
TSC22D4Q9Y3Q8 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC25■■□□□ 1.59
TSC22D4Q9Y3Q8 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC25■■□□□ 1.59
TSC22D4Q9Y3Q8 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC25■■□□□ 1.59
TSC22D4Q9Y3Q8 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC25■■□□□ 1.59
TSC22D4Q9Y3Q8 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
TSC22D4Q9Y3Q8 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC24.99■■□□□ 1.59
TSC22D4Q9Y3Q8 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC24.99■■□□□ 1.59
TSC22D4Q9Y3Q8 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms