Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC19.03■□□□□ 0.64
HHLA3Q9XRX5 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HHLA3Q9XRX5 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HHLA3Q9XRX5 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HHLA3Q9XRX5 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HHLA3Q9XRX5 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC19.01■□□□□ 0.63
HHLA3Q9XRX5 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
HHLA3Q9XRX5 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HHLA3Q9XRX5 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC19■□□□□ 0.63
HHLA3Q9XRX5 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC19■□□□□ 0.63
HHLA3Q9XRX5 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC18.99■□□□□ 0.63
HHLA3Q9XRX5 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HHLA3Q9XRX5 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
HHLA3Q9XRX5 AC097358.2-201ENST00000607541 1159 ntBASIC18.99■□□□□ 0.63
HHLA3Q9XRX5 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HHLA3Q9XRX5 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HHLA3Q9XRX5 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC18.98■□□□□ 0.63
HHLA3Q9XRX5 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HHLA3Q9XRX5 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HHLA3Q9XRX5 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HHLA3Q9XRX5 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
HHLA3Q9XRX5 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HHLA3Q9XRX5 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HHLA3Q9XRX5 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
HHLA3Q9XRX5 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HHLA3Q9XRX5 ST7-AS1-201ENST00000456775 1889 ntBASIC18.96■□□□□ 0.63
HHLA3Q9XRX5 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HHLA3Q9XRX5 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HHLA3Q9XRX5 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC18.95■□□□□ 0.62
HHLA3Q9XRX5 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
HHLA3Q9XRX5 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
HHLA3Q9XRX5 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
HHLA3Q9XRX5 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HHLA3Q9XRX5 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
HHLA3Q9XRX5 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
HHLA3Q9XRX5 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HHLA3Q9XRX5 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC18.92■□□□□ 0.62
HHLA3Q9XRX5 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HHLA3Q9XRX5 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC18.92■□□□□ 0.62
HHLA3Q9XRX5 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
HHLA3Q9XRX5 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HHLA3Q9XRX5 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
HHLA3Q9XRX5 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC18.91■□□□□ 0.62
HHLA3Q9XRX5 SHF-207ENST00000560540 2062 ntTSL 5 BASIC18.91■□□□□ 0.62
HHLA3Q9XRX5 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HHLA3Q9XRX5 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HHLA3Q9XRX5 AC136428.2-201ENST00000563187 214 ntBASIC18.91■□□□□ 0.62
HHLA3Q9XRX5 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HHLA3Q9XRX5 CREM-210ENST00000374721 2020 ntTSL 5 BASIC18.9■□□□□ 0.62
HHLA3Q9XRX5 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC18.9■□□□□ 0.62
HHLA3Q9XRX5 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HHLA3Q9XRX5 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HHLA3Q9XRX5 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HHLA3Q9XRX5 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
HHLA3Q9XRX5 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HHLA3Q9XRX5 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC18.89■□□□□ 0.62
HHLA3Q9XRX5 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HHLA3Q9XRX5 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC18.89■□□□□ 0.61
HHLA3Q9XRX5 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HHLA3Q9XRX5 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
HHLA3Q9XRX5 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HHLA3Q9XRX5 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC18.88■□□□□ 0.61
HHLA3Q9XRX5 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HHLA3Q9XRX5 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HHLA3Q9XRX5 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC18.88■□□□□ 0.61
HHLA3Q9XRX5 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HHLA3Q9XRX5 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
HHLA3Q9XRX5 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HHLA3Q9XRX5 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HHLA3Q9XRX5 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HHLA3Q9XRX5 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
HHLA3Q9XRX5 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HHLA3Q9XRX5 AL391121.1-201ENST00000607967 1349 ntBASIC18.87■□□□□ 0.61
HHLA3Q9XRX5 AL121749.1-202ENST00000609313 2153 ntBASIC18.86■□□□□ 0.61
HHLA3Q9XRX5 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HHLA3Q9XRX5 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HHLA3Q9XRX5 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HHLA3Q9XRX5 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HHLA3Q9XRX5 EBPL-202ENST00000378268 680 ntTSL 3 BASIC18.86■□□□□ 0.61
HHLA3Q9XRX5 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC18.86■□□□□ 0.61
HHLA3Q9XRX5 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
HHLA3Q9XRX5 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC18.86■□□□□ 0.61
HHLA3Q9XRX5 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HHLA3Q9XRX5 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HHLA3Q9XRX5 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HHLA3Q9XRX5 CAHM-201ENST00000604200 896 ntBASIC18.85■□□□□ 0.61
HHLA3Q9XRX5 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
HHLA3Q9XRX5 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
HHLA3Q9XRX5 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
HHLA3Q9XRX5 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
HHLA3Q9XRX5 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
HHLA3Q9XRX5 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HHLA3Q9XRX5 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HHLA3Q9XRX5 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
HHLA3Q9XRX5 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HHLA3Q9XRX5 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HHLA3Q9XRX5 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HHLA3Q9XRX5 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HHLA3Q9XRX5 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
HHLA3Q9XRX5 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 10.3 ms