Protein–RNA interactions for Protein: Q99942

RNF5, E3 ubiquitin-protein ligase RNF5, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF5Q99942 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF5Q99942 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RNF5Q99942 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC21.03■□□□□ 0.96
RNF5Q99942 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
RNF5Q99942 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RNF5Q99942 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RNF5Q99942 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RNF5Q99942 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RNF5Q99942 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RNF5Q99942 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC21.02■□□□□ 0.96
RNF5Q99942 AC005559.1-201ENST00000589661 871 ntBASIC21.02■□□□□ 0.96
RNF5Q99942 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
RNF5Q99942 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNF5Q99942 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNF5Q99942 RPS2-209ENST00000529806 993 ntTSL 3 BASIC21.01■□□□□ 0.95
RNF5Q99942 ABCB10P3-201ENST00000561950 2166 ntBASIC21.01■□□□□ 0.95
RNF5Q99942 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RNF5Q99942 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC21■□□□□ 0.95
RNF5Q99942 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC21■□□□□ 0.95
RNF5Q99942 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RNF5Q99942 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RNF5Q99942 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
RNF5Q99942 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNF5Q99942 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC20.98■□□□□ 0.95
RNF5Q99942 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RNF5Q99942 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC20.97■□□□□ 0.95
RNF5Q99942 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC20.97■□□□□ 0.95
RNF5Q99942 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RNF5Q99942 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
RNF5Q99942 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF5Q99942 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC20.96■□□□□ 0.95
RNF5Q99942 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF5Q99942 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF5Q99942 MIR3665-201ENST00000578708 105 ntBASIC20.96■□□□□ 0.95
RNF5Q99942 AP006261.1-201ENST00000584783 668 ntBASIC20.96■□□□□ 0.95
RNF5Q99942 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF5Q99942 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF5Q99942 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF5Q99942 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RNF5Q99942 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
RNF5Q99942 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RNF5Q99942 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
RNF5Q99942 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC20.94■□□□□ 0.94
RNF5Q99942 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
RNF5Q99942 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RNF5Q99942 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RNF5Q99942 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RNF5Q99942 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RNF5Q99942 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RNF5Q99942 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC20.93■□□□□ 0.94
RNF5Q99942 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
RNF5Q99942 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC20.92■□□□□ 0.94
RNF5Q99942 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC20.92■□□□□ 0.94
RNF5Q99942 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RNF5Q99942 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
RNF5Q99942 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF5Q99942 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
RNF5Q99942 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RNF5Q99942 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC20.9■□□□□ 0.94
RNF5Q99942 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC20.9■□□□□ 0.94
RNF5Q99942 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RNF5Q99942 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC20.89■□□□□ 0.93
RNF5Q99942 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC20.89■□□□□ 0.93
RNF5Q99942 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RNF5Q99942 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RNF5Q99942 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC20.88■□□□□ 0.93
RNF5Q99942 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RNF5Q99942 AC108673.1-201ENST00000510422 1159 ntBASIC20.88■□□□□ 0.93
RNF5Q99942 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC20.88■□□□□ 0.93
RNF5Q99942 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RNF5Q99942 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RNF5Q99942 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RNF5Q99942 AP004833.2-201ENST00000532228 1454 ntBASIC20.87■□□□□ 0.93
RNF5Q99942 AL139393.2-201ENST00000608721 2025 ntBASIC20.87■□□□□ 0.93
RNF5Q99942 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC20.87■□□□□ 0.93
RNF5Q99942 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RNF5Q99942 DUX4L28-201ENST00000623687 678 ntBASIC20.86■□□□□ 0.93
RNF5Q99942 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RNF5Q99942 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RNF5Q99942 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
RNF5Q99942 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RNF5Q99942 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC20.84■□□□□ 0.93
RNF5Q99942 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RNF5Q99942 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC20.84■□□□□ 0.93
RNF5Q99942 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC20.84■□□□□ 0.93
RNF5Q99942 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RNF5Q99942 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
RNF5Q99942 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC20.83■□□□□ 0.92
RNF5Q99942 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC20.82■□□□□ 0.92
RNF5Q99942 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF5Q99942 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RNF5Q99942 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RNF5Q99942 AC127502.1-201ENST00000399971 1502 ntBASIC20.8■□□□□ 0.92
RNF5Q99942 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RNF5Q99942 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RNF5Q99942 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RNF5Q99942 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RNF5Q99942 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RNF5Q99942 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC20.8■□□□□ 0.92
RNF5Q99942 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms