Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MRPL55Q7Z7F7 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
MRPL55Q7Z7F7 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MRPL55Q7Z7F7 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
MRPL55Q7Z7F7 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MRPL55Q7Z7F7 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC16.72■□□□□ 0.27
MRPL55Q7Z7F7 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
MRPL55Q7Z7F7 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MRPL55Q7Z7F7 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
MRPL55Q7Z7F7 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC16.71■□□□□ 0.27
MRPL55Q7Z7F7 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MRPL55Q7Z7F7 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MRPL55Q7Z7F7 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC16.71■□□□□ 0.26
MRPL55Q7Z7F7 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC16.7■□□□□ 0.26
MRPL55Q7Z7F7 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MRPL55Q7Z7F7 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
MRPL55Q7Z7F7 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
MRPL55Q7Z7F7 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
MRPL55Q7Z7F7 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
MRPL55Q7Z7F7 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MRPL55Q7Z7F7 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
MRPL55Q7Z7F7 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC16.69■□□□□ 0.26
MRPL55Q7Z7F7 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
MRPL55Q7Z7F7 SHF-206ENST00000560471 2499 ntTSL 5 BASIC16.69■□□□□ 0.26
MRPL55Q7Z7F7 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
MRPL55Q7Z7F7 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MRPL55Q7Z7F7 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
MRPL55Q7Z7F7 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MRPL55Q7Z7F7 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MRPL55Q7Z7F7 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC16.66■□□□□ 0.26
MRPL55Q7Z7F7 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MRPL55Q7Z7F7 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
MRPL55Q7Z7F7 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MRPL55Q7Z7F7 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
MRPL55Q7Z7F7 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MRPL55Q7Z7F7 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
MRPL55Q7Z7F7 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MRPL55Q7Z7F7 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MRPL55Q7Z7F7 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC16.62■□□□□ 0.25
MRPL55Q7Z7F7 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC16.62■□□□□ 0.25
MRPL55Q7Z7F7 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MRPL55Q7Z7F7 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
MRPL55Q7Z7F7 AC010864.1-201ENST00000609407 1511 ntBASIC16.61■□□□□ 0.25
MRPL55Q7Z7F7 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
MRPL55Q7Z7F7 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
MRPL55Q7Z7F7 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC16.61■□□□□ 0.25
MRPL55Q7Z7F7 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MRPL55Q7Z7F7 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
MRPL55Q7Z7F7 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
MRPL55Q7Z7F7 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MRPL55Q7Z7F7 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MRPL55Q7Z7F7 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC16.6■□□□□ 0.25
MRPL55Q7Z7F7 EBPL-202ENST00000378268 680 ntTSL 3 BASIC16.6■□□□□ 0.25
MRPL55Q7Z7F7 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MRPL55Q7Z7F7 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
MRPL55Q7Z7F7 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MRPL55Q7Z7F7 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC16.6■□□□□ 0.25
MRPL55Q7Z7F7 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
MRPL55Q7Z7F7 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
MRPL55Q7Z7F7 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC16.58■□□□□ 0.24
MRPL55Q7Z7F7 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
MRPL55Q7Z7F7 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
MRPL55Q7Z7F7 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
MRPL55Q7Z7F7 AL391121.1-201ENST00000607967 1349 ntBASIC16.57■□□□□ 0.24
MRPL55Q7Z7F7 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
MRPL55Q7Z7F7 DENR-202ENST00000455982 1052 ntTSL 5 BASIC16.56■□□□□ 0.24
MRPL55Q7Z7F7 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
MRPL55Q7Z7F7 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC16.56■□□□□ 0.24
MRPL55Q7Z7F7 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
MRPL55Q7Z7F7 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
MRPL55Q7Z7F7 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
MRPL55Q7Z7F7 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
MRPL55Q7Z7F7 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
MRPL55Q7Z7F7 AL139393.2-201ENST00000608721 2025 ntBASIC16.55■□□□□ 0.24
MRPL55Q7Z7F7 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
MRPL55Q7Z7F7 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
MRPL55Q7Z7F7 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
MRPL55Q7Z7F7 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
MRPL55Q7Z7F7 AC097358.2-201ENST00000607541 1159 ntBASIC16.55■□□□□ 0.24
MRPL55Q7Z7F7 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
MRPL55Q7Z7F7 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
MRPL55Q7Z7F7 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MRPL55Q7Z7F7 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MRPL55Q7Z7F7 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC16.54■□□□□ 0.24
MRPL55Q7Z7F7 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
MRPL55Q7Z7F7 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
MRPL55Q7Z7F7 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MRPL55Q7Z7F7 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MRPL55Q7Z7F7 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC16.53■□□□□ 0.24
MRPL55Q7Z7F7 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MRPL55Q7Z7F7 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
MRPL55Q7Z7F7 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
MRPL55Q7Z7F7 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
MRPL55Q7Z7F7 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
MRPL55Q7Z7F7 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
MRPL55Q7Z7F7 AC136428.2-201ENST00000563187 214 ntBASIC16.52■□□□□ 0.24
MRPL55Q7Z7F7 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
MRPL55Q7Z7F7 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
MRPL55Q7Z7F7 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
MRPL55Q7Z7F7 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 128 ms