Protein–RNA interactions for Protein: P35713

SOX18, Transcription factor SOX-18, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX18P35713 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
SOX18P35713 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
SOX18P35713 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC24.66■■□□□ 1.54
SOX18P35713 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
SOX18P35713 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
SOX18P35713 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
SOX18P35713 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
SOX18P35713 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC24.64■■□□□ 1.54
SOX18P35713 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
SOX18P35713 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC24.64■■□□□ 1.54
SOX18P35713 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
SOX18P35713 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
SOX18P35713 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC24.64■■□□□ 1.53
SOX18P35713 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
SOX18P35713 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
SOX18P35713 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
SOX18P35713 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC24.63■■□□□ 1.53
SOX18P35713 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
SOX18P35713 DUX4L28-201ENST00000623687 678 ntBASIC24.63■■□□□ 1.53
SOX18P35713 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
SOX18P35713 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
SOX18P35713 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC24.61■■□□□ 1.53
SOX18P35713 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
SOX18P35713 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
SOX18P35713 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC24.6■■□□□ 1.53
SOX18P35713 AC005559.1-201ENST00000589661 871 ntBASIC24.6■■□□□ 1.53
SOX18P35713 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
SOX18P35713 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
SOX18P35713 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC24.58■■□□□ 1.53
SOX18P35713 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC24.58■■□□□ 1.53
SOX18P35713 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC24.58■■□□□ 1.52
SOX18P35713 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
SOX18P35713 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC24.57■■□□□ 1.52
SOX18P35713 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
SOX18P35713 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC24.57■■□□□ 1.52
SOX18P35713 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
SOX18P35713 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
SOX18P35713 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC24.55■■□□□ 1.52
SOX18P35713 AL162393.1-201ENST00000437852 946 ntBASIC24.55■■□□□ 1.52
SOX18P35713 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC24.55■■□□□ 1.52
SOX18P35713 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
SOX18P35713 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
SOX18P35713 ABCB10P3-201ENST00000561950 2166 ntBASIC24.53■■□□□ 1.52
SOX18P35713 AP006261.1-201ENST00000584783 668 ntBASIC24.53■■□□□ 1.52
SOX18P35713 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
SOX18P35713 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
SOX18P35713 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC24.52■■□□□ 1.52
SOX18P35713 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC24.52■■□□□ 1.52
SOX18P35713 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
SOX18P35713 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
SOX18P35713 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
SOX18P35713 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC24.5■■□□□ 1.51
SOX18P35713 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC24.5■■□□□ 1.51
SOX18P35713 AC139426.1-201ENST00000568218 2529 ntBASIC24.5■■□□□ 1.51
SOX18P35713 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC24.5■■□□□ 1.51
SOX18P35713 RPS2P35-201ENST00000443417 897 ntBASIC24.5■■□□□ 1.51
SOX18P35713 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
SOX18P35713 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
SOX18P35713 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC24.5■■□□□ 1.51
SOX18P35713 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
SOX18P35713 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
SOX18P35713 MIR3665-201ENST00000578708 105 ntBASIC24.49■■□□□ 1.51
SOX18P35713 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC24.49■■□□□ 1.51
SOX18P35713 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC24.48■■□□□ 1.51
SOX18P35713 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
SOX18P35713 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC24.47■■□□□ 1.51
SOX18P35713 RPS2-209ENST00000529806 993 ntTSL 3 BASIC24.47■■□□□ 1.51
SOX18P35713 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
SOX18P35713 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
SOX18P35713 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC24.46■■□□□ 1.51
SOX18P35713 AC087741.3-201ENST00000624270 1347 ntBASIC24.46■■□□□ 1.51
SOX18P35713 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC24.46■■□□□ 1.51
SOX18P35713 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
SOX18P35713 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC24.46■■□□□ 1.51
SOX18P35713 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
SOX18P35713 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC24.45■■□□□ 1.51
SOX18P35713 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC24.45■■□□□ 1.5
SOX18P35713 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC24.45■■□□□ 1.5
SOX18P35713 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
SOX18P35713 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC24.44■■□□□ 1.5
SOX18P35713 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
SOX18P35713 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC24.43■■□□□ 1.5
SOX18P35713 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
SOX18P35713 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC24.43■■□□□ 1.5
SOX18P35713 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC24.43■■□□□ 1.5
SOX18P35713 SHF-206ENST00000560471 2499 ntTSL 5 BASIC24.42■■□□□ 1.5
SOX18P35713 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
SOX18P35713 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
SOX18P35713 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC24.42■■□□□ 1.5
SOX18P35713 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
SOX18P35713 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
SOX18P35713 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
SOX18P35713 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
SOX18P35713 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
SOX18P35713 MIR6090-201ENST00000622481 60 ntBASIC24.41■■□□□ 1.5
SOX18P35713 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC24.41■■□□□ 1.5
SOX18P35713 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC24.4■■□□□ 1.5
SOX18P35713 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
SOX18P35713 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC24.4■■□□□ 1.5
SOX18P35713 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms