Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
RTCAO00442 AC010864.1-201ENST00000609407 1511 ntBASIC25.12■■□□□ 1.61
RTCAO00442 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC25.11■■□□□ 1.61
RTCAO00442 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
RTCAO00442 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
RTCAO00442 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC25.1■■□□□ 1.61
RTCAO00442 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
RTCAO00442 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
RTCAO00442 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
RTCAO00442 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.61
RTCAO00442 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
RTCAO00442 AC139426.1-201ENST00000568218 2529 ntBASIC25.08■■□□□ 1.61
RTCAO00442 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
RTCAO00442 AC005559.1-201ENST00000589661 871 ntBASIC25.07■■□□□ 1.6
RTCAO00442 ABCB10P3-201ENST00000561950 2166 ntBASIC25.07■■□□□ 1.6
RTCAO00442 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
RTCAO00442 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
RTCAO00442 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
RTCAO00442 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
RTCAO00442 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
RTCAO00442 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC25.04■■□□□ 1.6
RTCAO00442 DUX4L28-201ENST00000623687 678 ntBASIC25.02■■□□□ 1.6
RTCAO00442 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC25.01■■□□□ 1.59
RTCAO00442 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC25■■□□□ 1.59
RTCAO00442 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC25■■□□□ 1.59
RTCAO00442 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
RTCAO00442 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC25■■□□□ 1.59
RTCAO00442 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC25■■□□□ 1.59
RTCAO00442 RPS2-209ENST00000529806 993 ntTSL 3 BASIC25■■□□□ 1.59
RTCAO00442 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC25■■□□□ 1.59
RTCAO00442 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC25■■□□□ 1.59
RTCAO00442 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
RTCAO00442 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC25■■□□□ 1.59
RTCAO00442 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC24.98■■□□□ 1.59
RTCAO00442 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC24.98■■□□□ 1.59
RTCAO00442 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
RTCAO00442 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
RTCAO00442 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC24.96■■□□□ 1.59
RTCAO00442 NRG1-221ENST00000614767 762 ntTSL 5 BASIC24.96■■□□□ 1.59
RTCAO00442 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
RTCAO00442 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC24.95■■□□□ 1.59
RTCAO00442 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC24.95■■□□□ 1.58
RTCAO00442 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
RTCAO00442 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
RTCAO00442 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC24.94■■□□□ 1.58
RTCAO00442 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC24.94■■□□□ 1.58
RTCAO00442 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC24.94■■□□□ 1.58
RTCAO00442 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
RTCAO00442 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
RTCAO00442 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC24.93■■□□□ 1.58
RTCAO00442 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
RTCAO00442 MIR3665-201ENST00000578708 105 ntBASIC24.93■■□□□ 1.58
RTCAO00442 AP006261.1-201ENST00000584783 668 ntBASIC24.93■■□□□ 1.58
RTCAO00442 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
RTCAO00442 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.58
RTCAO00442 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC24.92■■□□□ 1.58
RTCAO00442 AL162393.1-201ENST00000437852 946 ntBASIC24.92■■□□□ 1.58
RTCAO00442 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
RTCAO00442 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
RTCAO00442 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
RTCAO00442 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
RTCAO00442 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC24.92■■□□□ 1.58
RTCAO00442 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC24.91■■□□□ 1.58
RTCAO00442 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC24.91■■□□□ 1.58
RTCAO00442 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
RTCAO00442 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC24.91■■□□□ 1.58
RTCAO00442 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC24.91■■□□□ 1.58
RTCAO00442 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC24.91■■□□□ 1.58
RTCAO00442 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
RTCAO00442 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC24.9■■□□□ 1.58
RTCAO00442 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
RTCAO00442 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
RTCAO00442 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC24.89■■□□□ 1.58
RTCAO00442 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC24.89■■□□□ 1.57
RTCAO00442 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC24.89■■□□□ 1.57
RTCAO00442 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC24.88■■□□□ 1.57
RTCAO00442 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC24.88■■□□□ 1.57
RTCAO00442 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
RTCAO00442 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
RTCAO00442 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
RTCAO00442 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
RTCAO00442 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC24.86■■□□□ 1.57
RTCAO00442 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
RTCAO00442 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC24.85■■□□□ 1.57
RTCAO00442 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC24.85■■□□□ 1.57
RTCAO00442 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC24.85■■□□□ 1.57
RTCAO00442 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC24.84■■□□□ 1.57
RTCAO00442 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
RTCAO00442 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
RTCAO00442 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
RTCAO00442 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC24.83■■□□□ 1.57
RTCAO00442 AC087741.3-201ENST00000624270 1347 ntBASIC24.83■■□□□ 1.56
RTCAO00442 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC24.82■■□□□ 1.56
RTCAO00442 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
RTCAO00442 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
RTCAO00442 SHF-206ENST00000560471 2499 ntTSL 5 BASIC24.82■■□□□ 1.56
RTCAO00442 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
RTCAO00442 AL139393.2-201ENST00000608721 2025 ntBASIC24.81■■□□□ 1.56
RTCAO00442 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
RTCAO00442 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC24.81■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms