Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
RTCAO00442 AC010864.1-201ENST00000609407 1511 ntBASIC25.12■■□□□ 1.61
RTCAO00442 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC25.11■■□□□ 1.61
RTCAO00442 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
RTCAO00442 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
RTCAO00442 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC25.1■■□□□ 1.61
RTCAO00442 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
RTCAO00442 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
RTCAO00442 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
RTCAO00442 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.61
RTCAO00442 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
RTCAO00442 AC139426.1-201ENST00000568218 2529 ntBASIC25.08■■□□□ 1.61
RTCAO00442 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
RTCAO00442 AC005559.1-201ENST00000589661 871 ntBASIC25.07■■□□□ 1.6
RTCAO00442 ABCB10P3-201ENST00000561950 2166 ntBASIC25.07■■□□□ 1.6
RTCAO00442 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
RTCAO00442 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
RTCAO00442 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
RTCAO00442 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
RTCAO00442 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
RTCAO00442 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC25.04■■□□□ 1.6
RTCAO00442 DUX4L28-201ENST00000623687 678 ntBASIC25.02■■□□□ 1.6
RTCAO00442 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC25.01■■□□□ 1.59
RTCAO00442 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC25■■□□□ 1.59
RTCAO00442 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC25■■□□□ 1.59
RTCAO00442 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
RTCAO00442 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC25■■□□□ 1.59
RTCAO00442 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC25■■□□□ 1.59
RTCAO00442 RPS2-209ENST00000529806 993 ntTSL 3 BASIC25■■□□□ 1.59
RTCAO00442 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC25■■□□□ 1.59
RTCAO00442 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC25■■□□□ 1.59
RTCAO00442 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
RTCAO00442 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC25■■□□□ 1.59
RTCAO00442 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC24.98■■□□□ 1.59
RTCAO00442 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC24.98■■□□□ 1.59
RTCAO00442 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
RTCAO00442 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
RTCAO00442 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC24.96■■□□□ 1.59
RTCAO00442 NRG1-221ENST00000614767 762 ntTSL 5 BASIC24.96■■□□□ 1.59
RTCAO00442 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
RTCAO00442 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC24.95■■□□□ 1.59
RTCAO00442 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC24.95■■□□□ 1.58
RTCAO00442 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
RTCAO00442 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
RTCAO00442 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC24.94■■□□□ 1.58
RTCAO00442 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC24.94■■□□□ 1.58
RTCAO00442 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC24.94■■□□□ 1.58
RTCAO00442 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
RTCAO00442 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
RTCAO00442 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC24.93■■□□□ 1.58
RTCAO00442 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
RTCAO00442 MIR3665-201ENST00000578708 105 ntBASIC24.93■■□□□ 1.58
RTCAO00442 AP006261.1-201ENST00000584783 668 ntBASIC24.93■■□□□ 1.58
RTCAO00442 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
RTCAO00442 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.58
RTCAO00442 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC24.92■■□□□ 1.58
RTCAO00442 AL162393.1-201ENST00000437852 946 ntBASIC24.92■■□□□ 1.58
RTCAO00442 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
RTCAO00442 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
RTCAO00442 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
RTCAO00442 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
RTCAO00442 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC24.92■■□□□ 1.58
RTCAO00442 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC24.91■■□□□ 1.58
RTCAO00442 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC24.91■■□□□ 1.58
RTCAO00442 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
RTCAO00442 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC24.91■■□□□ 1.58
RTCAO00442 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC24.91■■□□□ 1.58
RTCAO00442 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC24.91■■□□□ 1.58
RTCAO00442 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
RTCAO00442 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC24.9■■□□□ 1.58
RTCAO00442 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
RTCAO00442 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
RTCAO00442 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC24.89■■□□□ 1.58
RTCAO00442 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC24.89■■□□□ 1.57
RTCAO00442 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC24.89■■□□□ 1.57
RTCAO00442 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC24.88■■□□□ 1.57
RTCAO00442 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC24.88■■□□□ 1.57
RTCAO00442 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
RTCAO00442 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
RTCAO00442 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
RTCAO00442 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
RTCAO00442 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC24.86■■□□□ 1.57
RTCAO00442 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
RTCAO00442 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC24.85■■□□□ 1.57
RTCAO00442 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC24.85■■□□□ 1.57
RTCAO00442 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC24.85■■□□□ 1.57
RTCAO00442 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC24.84■■□□□ 1.57
RTCAO00442 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
RTCAO00442 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
RTCAO00442 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
RTCAO00442 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC24.83■■□□□ 1.57
RTCAO00442 AC087741.3-201ENST00000624270 1347 ntBASIC24.83■■□□□ 1.56
RTCAO00442 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC24.82■■□□□ 1.56
RTCAO00442 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
RTCAO00442 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
RTCAO00442 SHF-206ENST00000560471 2499 ntTSL 5 BASIC24.82■■□□□ 1.56
RTCAO00442 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
RTCAO00442 AL139393.2-201ENST00000608721 2025 ntBASIC24.81■■□□□ 1.56
RTCAO00442 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
RTCAO00442 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC24.81■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms