Protein–RNA interactions for Protein: Q8NDX5

PHC3, Polyhomeotic-like protein 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3Q8NDX5 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC26.44■■□□□ 1.82
PHC3Q8NDX5 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC26.44■■□□□ 1.82
PHC3Q8NDX5 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
PHC3Q8NDX5 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
PHC3Q8NDX5 ABCB10P3-201ENST00000561950 2166 ntBASIC26.42■■□□□ 1.82
PHC3Q8NDX5 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
PHC3Q8NDX5 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
PHC3Q8NDX5 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
PHC3Q8NDX5 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC26.39■■□□□ 1.81
PHC3Q8NDX5 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
PHC3Q8NDX5 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
PHC3Q8NDX5 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
PHC3Q8NDX5 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC26.37■■□□□ 1.81
PHC3Q8NDX5 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
PHC3Q8NDX5 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
PHC3Q8NDX5 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC26.36■■□□□ 1.81
PHC3Q8NDX5 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC26.36■■□□□ 1.81
PHC3Q8NDX5 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
PHC3Q8NDX5 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC26.34■■□□□ 1.81
PHC3Q8NDX5 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
PHC3Q8NDX5 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC26.33■■□□□ 1.81
PHC3Q8NDX5 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC26.33■■□□□ 1.81
PHC3Q8NDX5 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC26.33■■□□□ 1.81
PHC3Q8NDX5 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
PHC3Q8NDX5 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
PHC3Q8NDX5 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
PHC3Q8NDX5 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
PHC3Q8NDX5 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
PHC3Q8NDX5 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
PHC3Q8NDX5 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
PHC3Q8NDX5 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
PHC3Q8NDX5 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC26.25■■□□□ 1.79
PHC3Q8NDX5 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
PHC3Q8NDX5 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
PHC3Q8NDX5 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
PHC3Q8NDX5 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
PHC3Q8NDX5 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
PHC3Q8NDX5 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC26.21■■□□□ 1.79
PHC3Q8NDX5 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC26.21■■□□□ 1.79
PHC3Q8NDX5 DENR-202ENST00000455982 1052 ntTSL 5 BASIC26.21■■□□□ 1.79
PHC3Q8NDX5 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC26.21■■□□□ 1.79
PHC3Q8NDX5 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
PHC3Q8NDX5 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
PHC3Q8NDX5 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
PHC3Q8NDX5 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
PHC3Q8NDX5 MIR762-201ENST00000390236 83 ntBASIC26.19■■□□□ 1.78
PHC3Q8NDX5 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
PHC3Q8NDX5 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC26.18■■□□□ 1.78
PHC3Q8NDX5 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
PHC3Q8NDX5 HNRNPLP2-201ENST00000568980 1570 ntBASIC26.16■■□□□ 1.78
PHC3Q8NDX5 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
PHC3Q8NDX5 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC26.15■■□□□ 1.78
PHC3Q8NDX5 CHML-205ENST00000638160 705 ntTSL 3 BASIC26.15■■□□□ 1.78
PHC3Q8NDX5 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC26.15■■□□□ 1.78
PHC3Q8NDX5 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
PHC3Q8NDX5 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
PHC3Q8NDX5 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
PHC3Q8NDX5 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
PHC3Q8NDX5 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
PHC3Q8NDX5 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC26.14■■□□□ 1.78
PHC3Q8NDX5 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC26.14■■□□□ 1.78
PHC3Q8NDX5 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC26.14■■□□□ 1.78
PHC3Q8NDX5 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
PHC3Q8NDX5 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC26.13■■□□□ 1.77
PHC3Q8NDX5 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
PHC3Q8NDX5 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
PHC3Q8NDX5 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
PHC3Q8NDX5 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC26.12■■□□□ 1.77
PHC3Q8NDX5 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC26.1■■□□□ 1.77
PHC3Q8NDX5 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC26.1■■□□□ 1.77
PHC3Q8NDX5 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
PHC3Q8NDX5 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
PHC3Q8NDX5 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
PHC3Q8NDX5 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
PHC3Q8NDX5 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
PHC3Q8NDX5 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC26.09■■□□□ 1.77
PHC3Q8NDX5 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
PHC3Q8NDX5 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC26.08■■□□□ 1.77
PHC3Q8NDX5 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC26.08■■□□□ 1.77
PHC3Q8NDX5 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
PHC3Q8NDX5 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC26.08■■□□□ 1.77
PHC3Q8NDX5 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC26.08■■□□□ 1.77
PHC3Q8NDX5 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC26.08■■□□□ 1.76
PHC3Q8NDX5 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC26.07■■□□□ 1.76
PHC3Q8NDX5 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
PHC3Q8NDX5 NRG1-221ENST00000614767 762 ntTSL 5 BASIC26.07■■□□□ 1.76
PHC3Q8NDX5 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC26.07■■□□□ 1.76
PHC3Q8NDX5 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
PHC3Q8NDX5 AC005559.1-201ENST00000589661 871 ntBASIC26.06■■□□□ 1.76
PHC3Q8NDX5 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
PHC3Q8NDX5 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC26.05■■□□□ 1.76
PHC3Q8NDX5 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC26.05■■□□□ 1.76
PHC3Q8NDX5 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
PHC3Q8NDX5 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
PHC3Q8NDX5 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
PHC3Q8NDX5 AL162393.1-201ENST00000437852 946 ntBASIC26.04■■□□□ 1.76
PHC3Q8NDX5 AP006261.1-201ENST00000584783 668 ntBASIC26.04■■□□□ 1.76
PHC3Q8NDX5 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC26.03■■□□□ 1.76
PHC3Q8NDX5 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
PHC3Q8NDX5 RPS2P35-201ENST00000443417 897 ntBASIC26.03■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms