Protein–RNA interactions for Protein: Q8N0Y7

PGAM4, Probable phosphoglycerate mutase 4, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGAM4Q8N0Y7 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
PGAM4Q8N0Y7 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
PGAM4Q8N0Y7 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
PGAM4Q8N0Y7 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
PGAM4Q8N0Y7 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC25.52■■□□□ 1.68
PGAM4Q8N0Y7 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
PGAM4Q8N0Y7 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC25.52■■□□□ 1.68
PGAM4Q8N0Y7 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC25.51■■□□□ 1.67
PGAM4Q8N0Y7 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
PGAM4Q8N0Y7 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
PGAM4Q8N0Y7 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
PGAM4Q8N0Y7 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC25.5■■□□□ 1.67
PGAM4Q8N0Y7 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC25.49■■□□□ 1.67
PGAM4Q8N0Y7 AL135925.1-201ENST00000605920 1701 ntBASIC25.49■■□□□ 1.67
PGAM4Q8N0Y7 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
PGAM4Q8N0Y7 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
PGAM4Q8N0Y7 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
PGAM4Q8N0Y7 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
PGAM4Q8N0Y7 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC25.47■■□□□ 1.67
PGAM4Q8N0Y7 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC25.47■■□□□ 1.67
PGAM4Q8N0Y7 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC25.47■■□□□ 1.67
PGAM4Q8N0Y7 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
PGAM4Q8N0Y7 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC25.46■■□□□ 1.67
PGAM4Q8N0Y7 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC25.46■■□□□ 1.67
PGAM4Q8N0Y7 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
PGAM4Q8N0Y7 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC25.45■■□□□ 1.67
PGAM4Q8N0Y7 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC25.45■■□□□ 1.66
PGAM4Q8N0Y7 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
PGAM4Q8N0Y7 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
PGAM4Q8N0Y7 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC25.44■■□□□ 1.66
PGAM4Q8N0Y7 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
PGAM4Q8N0Y7 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC25.42■■□□□ 1.66
PGAM4Q8N0Y7 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC25.41■■□□□ 1.66
PGAM4Q8N0Y7 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
PGAM4Q8N0Y7 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC25.39■■□□□ 1.66
PGAM4Q8N0Y7 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.66
PGAM4Q8N0Y7 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
PGAM4Q8N0Y7 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
PGAM4Q8N0Y7 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
PGAM4Q8N0Y7 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
PGAM4Q8N0Y7 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
PGAM4Q8N0Y7 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC25.37■■□□□ 1.65
PGAM4Q8N0Y7 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC25.35■■□□□ 1.65
PGAM4Q8N0Y7 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC25.35■■□□□ 1.65
PGAM4Q8N0Y7 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
PGAM4Q8N0Y7 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
PGAM4Q8N0Y7 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
PGAM4Q8N0Y7 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
PGAM4Q8N0Y7 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC25.31■■□□□ 1.64
PGAM4Q8N0Y7 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC25.31■■□□□ 1.64
PGAM4Q8N0Y7 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
PGAM4Q8N0Y7 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
PGAM4Q8N0Y7 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
PGAM4Q8N0Y7 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC25.3■■□□□ 1.64
PGAM4Q8N0Y7 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
PGAM4Q8N0Y7 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC25.29■■□□□ 1.64
PGAM4Q8N0Y7 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC25.29■■□□□ 1.64
PGAM4Q8N0Y7 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC25.29■■□□□ 1.64
PGAM4Q8N0Y7 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
PGAM4Q8N0Y7 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
PGAM4Q8N0Y7 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC25.28■■□□□ 1.64
PGAM4Q8N0Y7 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC25.27■■□□□ 1.64
PGAM4Q8N0Y7 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
PGAM4Q8N0Y7 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
PGAM4Q8N0Y7 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
PGAM4Q8N0Y7 AL139393.2-201ENST00000608721 2025 ntBASIC25.25■■□□□ 1.63
PGAM4Q8N0Y7 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
PGAM4Q8N0Y7 DRD5P2-201ENST00000421395 2012 ntBASIC25.25■■□□□ 1.63
PGAM4Q8N0Y7 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC25.23■■□□□ 1.63
PGAM4Q8N0Y7 AC006077.2-201ENST00000623591 457 ntBASIC25.23■■□□□ 1.63
PGAM4Q8N0Y7 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
PGAM4Q8N0Y7 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
PGAM4Q8N0Y7 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
PGAM4Q8N0Y7 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
PGAM4Q8N0Y7 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
PGAM4Q8N0Y7 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
PGAM4Q8N0Y7 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
PGAM4Q8N0Y7 AL121749.1-202ENST00000609313 2153 ntBASIC25.21■■□□□ 1.63
PGAM4Q8N0Y7 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
PGAM4Q8N0Y7 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC25.2■■□□□ 1.62
PGAM4Q8N0Y7 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
PGAM4Q8N0Y7 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC25.19■■□□□ 1.62
PGAM4Q8N0Y7 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
PGAM4Q8N0Y7 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC25.18■■□□□ 1.62
PGAM4Q8N0Y7 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC25.17■■□□□ 1.62
PGAM4Q8N0Y7 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
PGAM4Q8N0Y7 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC25.16■■□□□ 1.62
PGAM4Q8N0Y7 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC25.16■■□□□ 1.62
PGAM4Q8N0Y7 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
PGAM4Q8N0Y7 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
PGAM4Q8N0Y7 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
PGAM4Q8N0Y7 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
PGAM4Q8N0Y7 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC25.16■■□□□ 1.62
PGAM4Q8N0Y7 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
PGAM4Q8N0Y7 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
PGAM4Q8N0Y7 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC25.14■■□□□ 1.62
PGAM4Q8N0Y7 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC25.14■■□□□ 1.62
PGAM4Q8N0Y7 EBPL-203ENST00000378270 579 ntTSL 2 BASIC25.14■■□□□ 1.62
PGAM4Q8N0Y7 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC25.14■■□□□ 1.61
PGAM4Q8N0Y7 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms