Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC19.18■□□□□ 0.66
TRGV1A0A0A0MS02 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TRGV1A0A0A0MS02 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
TRGV1A0A0A0MS02 AC097358.2-201ENST00000607541 1159 ntBASIC19.16■□□□□ 0.66
TRGV1A0A0A0MS02 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TRGV1A0A0A0MS02 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRGV1A0A0A0MS02 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
TRGV1A0A0A0MS02 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
TRGV1A0A0A0MS02 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TRGV1A0A0A0MS02 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TRGV1A0A0A0MS02 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRGV1A0A0A0MS02 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC19.14■□□□□ 0.65
TRGV1A0A0A0MS02 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRGV1A0A0A0MS02 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC19.13■□□□□ 0.65
TRGV1A0A0A0MS02 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRGV1A0A0A0MS02 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRGV1A0A0A0MS02 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
TRGV1A0A0A0MS02 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC19.12■□□□□ 0.65
TRGV1A0A0A0MS02 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRGV1A0A0A0MS02 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TRGV1A0A0A0MS02 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
TRGV1A0A0A0MS02 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRGV1A0A0A0MS02 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRGV1A0A0A0MS02 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRGV1A0A0A0MS02 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC19.11■□□□□ 0.65
TRGV1A0A0A0MS02 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRGV1A0A0A0MS02 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC19.11■□□□□ 0.65
TRGV1A0A0A0MS02 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRGV1A0A0A0MS02 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
TRGV1A0A0A0MS02 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRGV1A0A0A0MS02 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TRGV1A0A0A0MS02 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TRGV1A0A0A0MS02 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC19.09■□□□□ 0.65
TRGV1A0A0A0MS02 AC136428.2-201ENST00000563187 214 ntBASIC19.09■□□□□ 0.65
TRGV1A0A0A0MS02 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRGV1A0A0A0MS02 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC19.09■□□□□ 0.65
TRGV1A0A0A0MS02 EBPL-202ENST00000378268 680 ntTSL 3 BASIC19.08■□□□□ 0.64
TRGV1A0A0A0MS02 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRGV1A0A0A0MS02 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRGV1A0A0A0MS02 AL391121.1-201ENST00000607967 1349 ntBASIC19.07■□□□□ 0.64
TRGV1A0A0A0MS02 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
TRGV1A0A0A0MS02 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRGV1A0A0A0MS02 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRGV1A0A0A0MS02 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRGV1A0A0A0MS02 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRGV1A0A0A0MS02 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRGV1A0A0A0MS02 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRGV1A0A0A0MS02 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRGV1A0A0A0MS02 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRGV1A0A0A0MS02 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC19.04■□□□□ 0.64
TRGV1A0A0A0MS02 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
TRGV1A0A0A0MS02 ST7-AS1-201ENST00000456775 1889 ntBASIC19.03■□□□□ 0.64
TRGV1A0A0A0MS02 AL135925.1-201ENST00000605920 1701 ntBASIC19.03■□□□□ 0.64
TRGV1A0A0A0MS02 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC19.03■□□□□ 0.64
TRGV1A0A0A0MS02 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC19.02■□□□□ 0.64
TRGV1A0A0A0MS02 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC19.02■□□□□ 0.64
TRGV1A0A0A0MS02 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRGV1A0A0A0MS02 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TRGV1A0A0A0MS02 CAHM-201ENST00000604200 896 ntBASIC19.02■□□□□ 0.64
TRGV1A0A0A0MS02 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRGV1A0A0A0MS02 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TRGV1A0A0A0MS02 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TRGV1A0A0A0MS02 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRGV1A0A0A0MS02 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRGV1A0A0A0MS02 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TRGV1A0A0A0MS02 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TRGV1A0A0A0MS02 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TRGV1A0A0A0MS02 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC19■□□□□ 0.63
TRGV1A0A0A0MS02 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
TRGV1A0A0A0MS02 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
TRGV1A0A0A0MS02 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRGV1A0A0A0MS02 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRGV1A0A0A0MS02 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRGV1A0A0A0MS02 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRGV1A0A0A0MS02 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRGV1A0A0A0MS02 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRGV1A0A0A0MS02 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRGV1A0A0A0MS02 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRGV1A0A0A0MS02 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRGV1A0A0A0MS02 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
TRGV1A0A0A0MS02 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRGV1A0A0A0MS02 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRGV1A0A0A0MS02 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRGV1A0A0A0MS02 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRGV1A0A0A0MS02 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRGV1A0A0A0MS02 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TRGV1A0A0A0MS02 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC18.97■□□□□ 0.63
TRGV1A0A0A0MS02 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRGV1A0A0A0MS02 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TRGV1A0A0A0MS02 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
TRGV1A0A0A0MS02 DENR-202ENST00000455982 1052 ntTSL 5 BASIC18.96■□□□□ 0.63
TRGV1A0A0A0MS02 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRGV1A0A0A0MS02 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRGV1A0A0A0MS02 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
TRGV1A0A0A0MS02 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TRGV1A0A0A0MS02 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC18.95■□□□□ 0.62
TRGV1A0A0A0MS02 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRGV1A0A0A0MS02 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRGV1A0A0A0MS02 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
TRGV1A0A0A0MS02 ABCB10P3-201ENST00000561950 2166 ntBASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms